BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001951
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...    63   3e-08
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]    63   3e-08
gb|AFK37258.1| unknown [Lotus japonicus]                               62   6e-08
gb|AFK40316.1| unknown [Lotus japonicus]                               59   3e-07
ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +2

Query: 2   QVYDYLV*SAAHNQTRESIDEFLTSCIKFDLEKA*KLNLINIRP-SAAEIDSAKDVAE 172
           +VYDYLV SAA NQTRESI+E L  C K+DL KA  LN+INIRP S  EID   + +E
Sbjct: 42  KVYDYLVESAACNQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESE 99


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +2

Query: 2   QVYDYLV*SAAHNQTRESIDEFLTSCIKFDLEKA*KLNLINIRP-SAAEIDSAKDVAE 172
           +VYDYLV SAA NQTRESI+E L  C K+DL KA  LN+INIRP S  EID   + +E
Sbjct: 63  KVYDYLVESAACNQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESE 120


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +2

Query: 2   QVYDYLV*SAAHNQTRESIDEFLTSCIKFDLEKA*KLNLINIRPSAA 142
           +VYDYLV +AA NQTRESI+EF+ S  K DL KA  LN+INIRP+AA
Sbjct: 42  KVYDYLVNTAASNQTRESINEFMASVKKHDLAKAEVLNIINIRPAAA 88


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = +2

Query: 2   QVYDYLV*SAAHNQTRESIDEFLTSCIKFDLEKA*KLNLINIRPSAA 142
           +VYDYLV +AA NQTRESI+EF+ S  K DL KA  LN+INI P+AA
Sbjct: 42  KVYDYLVNTAASNQTRESINEFMASVKKHDLAKAEVLNIINITPAAA 88


>ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|222855719|gb|EEE93266.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = +2

Query: 2   QVYDYLV*SAAHNQTRESIDEFLTSCIKFDLEKA*KLNLINIRPS 136
           +VYDYLV + A N TRE I+EFL  C K+DL KA  LN+INIRPS
Sbjct: 42  KVYDYLVETPACNLTREKINEFLERCKKYDLAKAELLNIINIRPS 86