BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001948
         (2512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2...   279   3e-72
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]           276   3e-71
ref|XP_004149583.1| PREDICTED: arginine/serine-rich-splicing fac...   275   4e-71
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]   274   7e-71
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...   273   1e-70

>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  279 bits (713), Expect = 3e-72
 Identities = 167/323 (51%), Positives = 201/323 (62%), Gaps = 8/323 (2%)
 Frame = -3

Query: 1169 TGFAFISMDDERDAEDAIRGLDQTEFGRQGRRLRVDWTKQEXXXXXXXXXXXXXXXR-PT 993
            +GFAFI M+DERDAEDAIRGLD+ EFGR+GRRLRV+WTKQE                 P+
Sbjct: 35   SGFAFIYMEDERDAEDAIRGLDRVEFGRKGRRLRVEWTKQERGIRRPGGTSRRSTNTRPS 94

Query: 992  KTLFVINFDPMHTRTRDLEKHFDPYGKIMSIRIRRNFAFVQYDSQEDATKALDATNMSKL 813
            KTLFVINFDP HTRT+DLE+HF+PYG+I+S+RIRRNFAFVQY++QEDATKALDATN+SKL
Sbjct: 95   KTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDATNLSKL 154

Query: 812  MDQVVSVEYAVRDDDGRNNRHSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSPDYGHG--- 642
            +D+V+SVEYAVRDDD R + +SP                 SPSP+RR+R SPDYG G   
Sbjct: 155  LDRVISVEYAVRDDDERKDGYSPDRSRDRSPDRRGHDRRRSPSPYRRERGSPDYGRGPSP 214

Query: 641  LGSERGR---DRARSPSPHRGDRYSPDYGRGPSPNGKPRSRAYQRGRRSPDDGHGPSPDV 471
               ERG     R RSPSP+R DR SPDYGRG S +   R RA +  R SP++G GPS   
Sbjct: 215  YRKERGSPDYGRRRSPSPYRRDRASPDYGRGTSRSPYRRERAGK--RISPENGRGPSRS- 271

Query: 470  KPEMRGRMYRRDSPNVVGGLSPDIKPELRSHTYRRDSPDVGRGSSPN-SEYEGRGNTRGQ 294
                    YRR+  N   G      P  R     R +PD GRGSS + +E +G     GQ
Sbjct: 272  -------PYRRERSNQGHGRGSSHSPYGR----ERPNPDNGRGSSRSPTERDGDSPENGQ 320

Query: 293  EIDSDFDHGASPPHTKPEPRGSP 225
                        P + P+ R SP
Sbjct: 321  ---------LRSPSSIPDERDSP 334


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score =  276 bits (705), Expect = 3e-71
 Identities = 170/378 (44%), Positives = 210/378 (55%), Gaps = 36/378 (9%)
 Frame = -3

Query: 1169 TGFAFISMDDERDAEDAIRGLDQTEFGRQGRRLRVDWTKQEXXXXXXXXXXXXXXXR-PT 993
            TGFAFI M+DERDAEDAIRGLD+T FGR+GRRLRV+WTKQE                 P 
Sbjct: 35   TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPA 94

Query: 992  KTLFVINFDPMHTRTRDLEKHFDPYGKIMSIRIRRNFAFVQYDSQEDATKALDATNMSKL 813
            KTLFVINFDP +TRTRDLE+HFDPYGKI++IRIRRNFAF+QY+SQEDAT+AL+ATNMSKL
Sbjct: 95   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154

Query: 812  MDQVVSVEYAVRDDDGRNNRHSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSPDYGHGLGS 633
            MD+V+SVEYAVRDDD R N +SP                 S SP+RR+R SPDYG G   
Sbjct: 155  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG--- 211

Query: 632  ERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRA------------YQRGRRSPDDGH 489
                    SPS +R +R SPDYGR PSP+ + R RA            ++R R S D   
Sbjct: 212  -------SSPSAYRRERASPDYGRDPSPSPRRRDRAMPDHGRSRSPSHHRRERTSHDSAR 264

Query: 488  GPSPDVKPEMRGRMYRRDSPNVVGGLS----------------PDIKPELRSHTYRRDS- 360
            GPS   +   R     R  P+   G S                P + PE +  T R +  
Sbjct: 265  GPS---RSPYRSERSDRAIPDYGRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKA 321

Query: 359  -PDVGRGSSPNSEYEGRGNTRGQEIDSDFDHGASPPHTKPEPRGSPKFAKTKSPIHEKKY 183
             PD GRG+SP+S    R N+     +S     +     +   R  P +   +S   E++ 
Sbjct: 322  IPDYGRGASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQRE 381

Query: 182  -----HSRSPSTRKSQRD 144
                 H R PS    +R+
Sbjct: 382  KANPDHGRGPSRSSPRRE 399



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 57/183 (31%), Positives = 76/183 (41%), Gaps = 2/183 (1%)
 Frame = -3

Query: 689 PSPHRRQRDSPDYGHGLGSERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRAYQRGR 510
           PS  RR+R + DY     + R R R++S SP + +R  PDYG   S + + R +A     
Sbjct: 331 PSSPRRERTNSDYVRA--NSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQREKA----- 383

Query: 509 RSPDDGHGPSPDVKPEMRGRMYRRDSPNVVGGLSPDIKPELRSHTYRRDS--PDVGRGSS 336
            +PD G GPS    P          SP       PD         Y+R+S  PD  RG S
Sbjct: 384 -NPDHGRGPSRS-SPRREYDRGPSQSPQQGERALPDYARGPSDSPYQRESISPDYDRGPS 441

Query: 335 PNSEYEGRGNTRGQEIDSDFDHGASPPHTKPEPRGSPKFAKTKSPIHEKKYHSRSPSTRK 156
           PNS                          K E R SP +  + SP++  +Y SRSP  R+
Sbjct: 442 PNS--------------------------KREERDSPNYGGSASPMN-GRYRSRSPPARE 474

Query: 155 SQR 147
             R
Sbjct: 475 RSR 477


>ref|XP_004149583.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Cucumis
            sativus]
          Length = 376

 Score =  275 bits (703), Expect = 4e-71
 Identities = 174/364 (47%), Positives = 211/364 (57%), Gaps = 26/364 (7%)
 Frame = -3

Query: 1169 TGFAFISMDDERDAEDAIRGLDQTEFGRQGRRLRVDWTKQEXXXXXXXXXXXXXXXR--- 999
            +GFAFI M+DERDAEDAIR LD+ EFGR+GRRLRV+WTKQE                   
Sbjct: 35   SGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGPGGGGGGGGGGG 94

Query: 998  ------------PTKTLFVINFDPMHTRTRDLEKHFDPYGKIMSIRIRRNFAFVQYDSQE 855
                        P+KTLFVINFDP HTRTRDLE+HFDPYGKI+S+RIRRNFAFVQY+ QE
Sbjct: 95   GGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQE 154

Query: 854  DATKALDATNMSKLMDQVVSVEYAVRDDDGRNNRHSPXXXXXXXXXXXXXXXXXSPSPHR 675
            DAT+AL+ TNMSKLMD+V+SVEYAVRDDD + N +SP                 S SP+R
Sbjct: 155  DATRALELTNMSKLMDRVISVEYAVRDDDDKRNGYSP----DRNRDRSPDRKRRSSSPYR 210

Query: 674  RQRDSPDYGHGLG-SERGRDRA-------RSPSPHRGDRY--SPDYGRGPSPNGKPRSRA 525
            R+R SPDYG+G+  S   R RA       RSPSP++ +R   SPDYGRG SPN  P    
Sbjct: 211  RERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPNHSP---- 266

Query: 524  YQRGRRSPDDGHGPSPDVKPEMRGRMYRRDSPNVVGGLSPDIKPELRSHTYRRDSPDVGR 345
            Y+R R    D H  +P  +P      ++R+ PN      P+  P        + SPD GR
Sbjct: 267  YRRERERSSD-HVRTPSHRPS-----HQRERPN--DDRVPNRSPSPYGRGREKGSPD-GR 317

Query: 344  GSSPNSEYEGRGNTRGQEIDSDFDHGASPPHTK-PEPRGSPKFAKTKSPIHEKKYHSRSP 168
            G+S    Y  R   R    D+  DHG     T  PEP  SP +  T+SP   + Y SRSP
Sbjct: 318  GTS----YSPRDRERSSNPDNGHDHGHDQQQTTIPEPGESPNYGGTQSP-KRRGYGSRSP 372

Query: 167  STRK 156
               +
Sbjct: 373  QAEE 376


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score =  274 bits (701), Expect = 7e-71
 Identities = 170/377 (45%), Positives = 209/377 (55%), Gaps = 36/377 (9%)
 Frame = -3

Query: 1169 TGFAFISMDDERDAEDAIRGLDQTEFGRQGRRLRVDWTKQEXXXXXXXXXXXXXXXR-PT 993
            TGFAFI M+DERDAEDAIRGLD+T FGR+GRRLRV+WTKQE                 P 
Sbjct: 35   TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPA 94

Query: 992  KTLFVINFDPMHTRTRDLEKHFDPYGKIMSIRIRRNFAFVQYDSQEDATKALDATNMSKL 813
            KTLFVINFDP +TRTRDLE+HFDPYGKI++IRIRRNFAF+QY+SQEDAT+AL+ATNMSKL
Sbjct: 95   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154

Query: 812  MDQVVSVEYAVRDDDGRNNRHSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSPDYGHGLGS 633
            MD+V+SVEYAVRDDD R N +SP                 S SP+RR+R SPDYG G   
Sbjct: 155  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG--- 211

Query: 632  ERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRA------------YQRGRRSPDDGH 489
                    SPS +R +R SPDYGR PSP+ + R RA            ++R R S D   
Sbjct: 212  -------SSPSAYRRERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSAR 264

Query: 488  GPSPDVKPEMRGRMYRRDSPNVVGGLS----------------PDIKPELRSHTYRRDS- 360
            GPS   +   R     R  P+   G S                P + PE +  T R +  
Sbjct: 265  GPS---RSPYRSERSDRAIPDYGRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKA 321

Query: 359  -PDVGRGSSPNSEYEGRGNTRGQEIDSDFDHGASPPHTKPEPRGSPKFAKTKSPIHEKKY 183
             PD GRG+SP+S    R N+     +S     +     +   R  P +   +S   E++ 
Sbjct: 322  IPDYGRGASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQRE 381

Query: 182  -----HSRSPSTRKSQR 147
                 + R PS    QR
Sbjct: 382  KANPDYGRGPSRSSPQR 398



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 50/129 (38%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
 Frame = -3

Query: 686 SPHRRQRDSPDYGHGLGSERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRAYQRG-R 510
           SP +R+R  PDYGH           RS SP + ++ +PDYGRGPS    P+ R Y RG  
Sbjct: 358 SPRQRERTKPDYGH----------ERSVSPEQREKANPDYGRGPS-RSSPQRREYDRGPS 406

Query: 509 RSPDDGHGPSPDVKPEMRGRMYRRD--SPNVVGGLSPDIKPELRSHTYRRDSPDVGRGSS 336
           +SP  G    PD         Y+R+  SP+   G SP+ K E       RDSP+ G  +S
Sbjct: 407 QSPQQGERALPDYSRGPSDSPYQRESISPDYDRGPSPNSKRE------ERDSPNYGGSAS 460

Query: 335 P-NSEYEGR 312
           P N  Y  R
Sbjct: 461 PMNGRYRSR 469


>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
            vinifera]
          Length = 480

 Score =  273 bits (699), Expect = 1e-70
 Identities = 169/378 (44%), Positives = 210/378 (55%), Gaps = 36/378 (9%)
 Frame = -3

Query: 1169 TGFAFISMDDERDAEDAIRGLDQTEFGRQGRRLRVDWTKQEXXXXXXXXXXXXXXXR-PT 993
            TGFAFI M+DERDAEDAIRGLD+T FGR+GRRLRV+WTKQE                 P 
Sbjct: 37   TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPA 96

Query: 992  KTLFVINFDPMHTRTRDLEKHFDPYGKIMSIRIRRNFAFVQYDSQEDATKALDATNMSKL 813
            KTLFVINFDP +TRTRDLE+HFDPYGKI++IRIRRNFAF+QY+SQEDAT+AL+ATNMSKL
Sbjct: 97   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 156

Query: 812  MDQVVSVEYAVRDDDGRNNRHSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSPDYGHGLGS 633
            MD+V+SVEYAVRDDD R N +SP                 S SP+RR+R SPDYG G   
Sbjct: 157  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG--- 213

Query: 632  ERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRA------------YQRGRRSPDDGH 489
                    SPS +R +R SPDYGR PSP+ + R RA            ++R R S D   
Sbjct: 214  -------SSPSAYRRERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSAR 266

Query: 488  GPSPDVKPEMRGRMYRRDSPNVVGGLS----------------PDIKPELRSHTYRRDS- 360
            GPS   +   R     R  P+   G S                P + PE +  T R +  
Sbjct: 267  GPS---RSPYRSERSDRAIPDYGRGRSPSPGRREKIMPDYPDRPSLSPERKEKTGRSEKA 323

Query: 359  -PDVGRGSSPNSEYEGRGNTRGQEIDSDFDHGASPPHTKPEPRGSPKFAKTKSPIHEKKY 183
             PD GRG+SP+S    R N+     +S     +     +   R  P +   +S   E++ 
Sbjct: 324  IPDYGRGASPSSPRRERTNSDYVRANSRSRSRSQSQSPRQRERTKPDYGHERSVSPEQRE 383

Query: 182  -----HSRSPSTRKSQRD 144
                 + R PS    +R+
Sbjct: 384  KANPDYGRGPSRSSPRRE 401



 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 58/181 (32%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
 Frame = -3

Query: 686 SPHRRQRDSPDYGHGLGSERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRAYQRG-R 510
           SP +R+R  PDYGH           RS SP + ++ +PDYGRGPS    PR R Y RG  
Sbjct: 360 SPRQRERTKPDYGH----------ERSVSPEQREKANPDYGRGPS-RSSPR-REYDRGPS 407

Query: 509 RSPDDGHGPSPDVKPEMRGRMYRRDSPNVVGGLSPDIKPELRSHTYRRDSPDVGRGSSPN 330
           +SP  G    PD         Y+R+S                       SPD  RG SPN
Sbjct: 408 QSPQQGERALPDYSRGPSDSPYQRESI----------------------SPDYDRGPSPN 445

Query: 329 SEYEGRGNTRGQEIDSDFDHGASPPHTKPEPRGSPKFAKTKSPIHEKKYHSRSPSTRKSQ 150
           S                          K E R SP +  + SP++  +Y SRSP  R+  
Sbjct: 446 S--------------------------KREERDSPNYGGSASPMN-GRYRSRSPPARERS 478

Query: 149 R 147
           R
Sbjct: 479 R 479