BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001930
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282339.1| PREDICTED: probable rhamnose biosynthetic en...   547   e-153
ref|XP_002509687.1| NAD dependent epimerase/dehydratase, putativ...   546   e-153
ref|XP_002887985.1| hypothetical protein ARALYDRAFT_893174 [Arab...   537   e-150
ref|XP_002303557.1| predicted protein [Populus trichocarpa] gi|1...   536   e-150
ref|NP_564806.1| 3,5-epimerase/4-reductase [Arabidopsis thaliana...   535   e-149

>ref|XP_002282339.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera]
          Length = 302

 Score =  547 bits (1409), Expect = e-153
 Identities = 262/300 (87%), Positives = 284/300 (94%)
 Frame = +2

Query: 146  MGFTSNGSSESTAPLKFLIYGRTGWIGGLLGKLCESQGINYVYGSGRLQDRDSLITDLET 325
            MGF +NG++ S   LKFLIYGRTGWIGGLLGKLCE+QG+ Y YGSGRL++R SL  DL +
Sbjct: 1    MGFPANGAAASDRKLKFLIYGRTGWIGGLLGKLCEAQGLEYSYGSGRLENRASLEADLAS 60

Query: 326  VKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLVLINYATGCIFE 505
            VKP+HVFNAAGVTGRPNVDWCESHKVETIRTNV GTLTLADVCRE+GLVLINYATGCIFE
Sbjct: 61   VKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADVCREKGLVLINYATGCIFE 120

Query: 506  YDLNHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 685
            YD NHPLGSG+GFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDL+NPR
Sbjct: 121  YDANHPLGSGVGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPR 180

Query: 686  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKA 865
            NFITKI++YEKVV+IPNSMTILDELLPIS+EMAKRNLTGIWNFTNPGVVSHNEILEMY+ 
Sbjct: 181  NFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRD 240

Query: 866  YIDPNFTWKNFTLEEQAKVIVAPRSNNELDSTKLKKEFPELLSIKESLIRYVFKPNQKTS 1045
            YIDPNF WKNFTLEEQAKVIVAPRSNNELD++KLKKEFPEL+SIKESLI+YVFKPNQK +
Sbjct: 241  YIDPNFAWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLIKYVFKPNQKAT 300


>ref|XP_002509687.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223549586|gb|EEF51074.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 302

 Score =  546 bits (1406), Expect = e-153
 Identities = 260/300 (86%), Positives = 283/300 (94%)
 Frame = +2

Query: 146  MGFTSNGSSESTAPLKFLIYGRTGWIGGLLGKLCESQGINYVYGSGRLQDRDSLITDLET 325
            MGF SNG++++  P KFLIYGRTGWIGGLLGKLCESQGI+Y YG+GRL++R SL  D+ +
Sbjct: 1    MGFQSNGATDNKKPYKFLIYGRTGWIGGLLGKLCESQGIDYTYGNGRLENRVSLENDIAS 60

Query: 326  VKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLVLINYATGCIFE 505
            + P+HVFNAAGVTGRPNVDWCESHKVETIRTNV GTLTLADVCRE+GLVLINYATGCIFE
Sbjct: 61   INPTHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADVCREKGLVLINYATGCIFE 120

Query: 506  YDLNHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 685
            YD  HPLGSGIGFKEEDTPNFIGSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL NPR
Sbjct: 121  YDDKHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLANPR 180

Query: 686  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKA 865
            NFITKI++YEKVVDIPNSMTILDELLPIS+EMAKRNLTGIWNFTNPGVVSHNEILEMY+ 
Sbjct: 181  NFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRD 240

Query: 866  YIDPNFTWKNFTLEEQAKVIVAPRSNNELDSTKLKKEFPELLSIKESLIRYVFKPNQKTS 1045
            Y+DPNFTWKNFTLEEQAKVIVAPRSNNELD+TKL KEFPE+L IKESLI+YVFKPNQKT+
Sbjct: 241  YVDPNFTWKNFTLEEQAKVIVAPRSNNELDATKLSKEFPEMLPIKESLIKYVFKPNQKTA 300


>ref|XP_002887985.1| hypothetical protein ARALYDRAFT_893174 [Arabidopsis lyrata subsp.
            lyrata] gi|297333826|gb|EFH64244.1| hypothetical protein
            ARALYDRAFT_893174 [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score =  537 bits (1383), Expect = e-150
 Identities = 260/295 (88%), Positives = 280/295 (94%)
 Frame = +2

Query: 158  SNGSSESTAPLKFLIYGRTGWIGGLLGKLCESQGINYVYGSGRLQDRDSLITDLETVKPS 337
            +NGSS S     FLIYGRTGWIGGLLGKLCESQGI+Y YGSGRLQDR S+I D+E+VKPS
Sbjct: 5    ANGSSTS---FNFLIYGRTGWIGGLLGKLCESQGISYTYGSGRLQDRQSIIADIESVKPS 61

Query: 338  HVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLVLINYATGCIFEYDLN 517
            HVFNAAGVTGRPNVDWCESHKVETIRTNV GTLTLAD+CRE+GLVLINYATGCIFEYD  
Sbjct: 62   HVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSG 121

Query: 518  HPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPRNFIT 697
            HPLGSGIGFKEEDTPNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDLTNPRNFIT
Sbjct: 122  HPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFIT 181

Query: 698  KISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKAYIDP 877
            KI++YEKVVDIPNSMTILDELLPIS+EMAKRNLTGI+NFTNPGVVSHNEILEMY+ YIDP
Sbjct: 182  KIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDP 241

Query: 878  NFTWKNFTLEEQAKVIVAPRSNNELDSTKLKKEFPELLSIKESLIRYVFKPNQKT 1042
            +FTWKNFTLEEQAKVIVAPRSNNELD+TKLK EFPEL+SIKESLI++VF+PN+KT
Sbjct: 242  SFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 296


>ref|XP_002303557.1| predicted protein [Populus trichocarpa] gi|118484773|gb|ABK94255.1|
            unknown [Populus trichocarpa] gi|222840989|gb|EEE78536.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  536 bits (1381), Expect = e-150
 Identities = 258/300 (86%), Positives = 281/300 (93%)
 Frame = +2

Query: 146  MGFTSNGSSESTAPLKFLIYGRTGWIGGLLGKLCESQGINYVYGSGRLQDRDSLITDLET 325
            MGF ++  + ST PLKFLIYGRTGWIGGLLGKLC+SQGI++ YGSGRL++R SL  D+  
Sbjct: 1    MGFETSNGTASTKPLKFLIYGRTGWIGGLLGKLCQSQGIDFTYGSGRLENRPSLEADVAA 60

Query: 326  VKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLVLINYATGCIFE 505
            V P+HVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRE+GLVLINYATGCIFE
Sbjct: 61   VNPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCREKGLVLINYATGCIFE 120

Query: 506  YDLNHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 685
            YD +HPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLL+NYENVCTLRVRMPIS DL NPR
Sbjct: 121  YDSSHPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLRNYENVCTLRVRMPISCDLANPR 180

Query: 686  NFITKISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKA 865
            NFITKI++YEKVV+IPNSMTILDELLPIS+EMAKRNLTGI+NFTNPGVVSHNEILEMY+ 
Sbjct: 181  NFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRD 240

Query: 866  YIDPNFTWKNFTLEEQAKVIVAPRSNNELDSTKLKKEFPELLSIKESLIRYVFKPNQKTS 1045
            YIDP FTWKNFTLEEQAKVIVAPRSNNELD+ KLK+EFPELL IKESLI+YVFKPNQKT+
Sbjct: 241  YIDPKFTWKNFTLEEQAKVIVAPRSNNELDTVKLKQEFPELLPIKESLIKYVFKPNQKTT 300


>ref|NP_564806.1| 3,5-epimerase/4-reductase [Arabidopsis thaliana]
            gi|8493590|gb|AAF75813.1|AC011000_16 Contains weak
            similarity to 5-epimerase from Saccharopolyspora
            erythraea gb|L37354. ESTs gb|T41773, gb|R29767,
            gb|T88368, gb|F13963 come from this gene [Arabidopsis
            thaliana] gi|12083298|gb|AAG48808.1|AF332445_1 unknown
            protein [Arabidopsis thaliana] gi|41080591|gb|AAR99502.1|
            3,5-epimerase/4-reductase [Arabidopsis thaliana]
            gi|332195914|gb|AEE34035.1| 3,5-epimerase/4-reductase
            [Arabidopsis thaliana]
          Length = 301

 Score =  535 bits (1378), Expect = e-149
 Identities = 257/295 (87%), Positives = 280/295 (94%)
 Frame = +2

Query: 158  SNGSSESTAPLKFLIYGRTGWIGGLLGKLCESQGINYVYGSGRLQDRDSLITDLETVKPS 337
            +NGSS S+    FLIYG+TGWIGGLLGKLCE+QGI Y YGSGRLQDR S++ D+E+VKPS
Sbjct: 5    ANGSSSSS--FNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPS 62

Query: 338  HVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLVLINYATGCIFEYDLN 517
            HVFNAAGVTGRPNVDWCESHKVETIRTNV GTLTLAD+CRE+GLVLINYATGCIFEYD  
Sbjct: 63   HVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSG 122

Query: 518  HPLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPRNFIT 697
            HPLGSGIGFKEEDTPNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDLTNPRNFIT
Sbjct: 123  HPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFIT 182

Query: 698  KISKYEKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILEMYKAYIDP 877
            KI++YEKVVDIPNSMTILDELLPIS+EMAKRNLTGI+NFTNPGVVSHNEILEMY+ YIDP
Sbjct: 183  KIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDP 242

Query: 878  NFTWKNFTLEEQAKVIVAPRSNNELDSTKLKKEFPELLSIKESLIRYVFKPNQKT 1042
            +FTWKNFTLEEQAKVIVAPRSNNELD+TKLK EFPEL+SIKESLI++VF+PN+KT
Sbjct: 243  SFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297