BLASTX nr result

ID: Coptis25_contig00001928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001928
         (1620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270182.1| PREDICTED: probable xyloglucan endotransgluc...   242   e-109
ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransgluc...   236   e-108
emb|CAN80252.1| hypothetical protein VITISV_036642 [Vitis vinifera]   240   e-108
ref|XP_002274827.1| PREDICTED: probable xyloglucan endotransgluc...   237   e-107
emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]   237   e-107

>ref|XP_002270182.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 296

 Score =  242 bits (617), Expect(2) = e-109
 Identities = 119/181 (65%), Positives = 133/181 (73%)
 Frame = +2

Query: 245 MFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXXXXXXXXXXXXXX 424
           +F++ +L  SF+ +   NL QD EITWGDGRAK+                          
Sbjct: 13  LFLVSLLLGSFVVASVGNLYQDFEITWGDGRAKILNNGELLTL----------------- 55

Query: 425 XXXXXXXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEI 604
                    SLDKTSGSGFQS+NEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEI
Sbjct: 56  ---------SLDKTSGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEI 106

Query: 605 DFEFLGNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIIFFVDGT 784
           DFEFLGNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+LWNP  IIF VDGT
Sbjct: 107 DFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFSVDGT 166

Query: 785 P 787
           P
Sbjct: 167 P 167



 Score =  181 bits (458), Expect(2) = e-109
 Identities = 94/161 (58%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
 Frame = +1

Query: 838  FFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTASYA 1017
            F VDGTPIR+FKNSESIGV +PKNQPM+IYSSLWNADDWATRGGLVKTDWS+APFTASY 
Sbjct: 161  FSVDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYR 220

Query: 1018 NFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKNYMIXXXXXXXX 1179
            NF A ACIW             +      W +Q LDSTSQE +K VQKN           
Sbjct: 221  NFNADACIWSSGASSCSSTTPSSTSTSGQWYSQELDSTSQERMKWVQKN----------- 269

Query: 1180 XXXXXXXXXXXXXXXXXXXYMIYNYCTDTKRFPQGLPRECS 1302
                               YMIYNYCTDTKRFPQGLP EC+
Sbjct: 270  -------------------YMIYNYCTDTKRFPQGLPPECT 291


>ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 296

 Score =  236 bits (601), Expect(2) = e-108
 Identities = 116/193 (60%), Positives = 134/193 (69%)
 Frame = +2

Query: 209 MTCNTSCRAETLMFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXX 388
           M   ++      + ++ +L  SF+ +   NL QD ++TWGDGRAK+              
Sbjct: 1   MASTSTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDLTWGDGRAKILNNGQLLTL----- 55

Query: 389 XXXXXXXXXXXXXXXXXXXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAY 568
                                SLDK SGSGFQS+NEY+FGKIDMQLKLVPGNSAGTVTAY
Sbjct: 56  ---------------------SLDKASGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAY 94

Query: 569 YLSSQGPTHDEIDFEFLGNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLW 748
           YLSSQGPTHDEIDFEFLGNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+LW
Sbjct: 95  YLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILW 154

Query: 749 NPLSIIFFVDGTP 787
           NP  IIF VDGTP
Sbjct: 155 NPQRIIFSVDGTP 167



 Score =  183 bits (465), Expect(2) = e-108
 Identities = 94/161 (58%), Positives = 103/161 (63%), Gaps = 6/161 (3%)
 Frame = +1

Query: 838  FFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTASYA 1017
            F VDGTPIR+FKNSESIGVPFPKNQPM+IYSSLWNADDWATRGGLVKTDW++APFTASY 
Sbjct: 161  FSVDGTPIREFKNSESIGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYR 220

Query: 1018 NFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKNYMIXXXXXXXX 1179
            NF A AC+W             +      W +Q LDSTSQE +K VQKN           
Sbjct: 221  NFNANACVWSSRSSSCSSTSPSSTSTNGGWYSQELDSTSQERMKWVQKN----------- 269

Query: 1180 XXXXXXXXXXXXXXXXXXXYMIYNYCTDTKRFPQGLPRECS 1302
                               YMIYNYCTDTKRFPQGLP EC+
Sbjct: 270  -------------------YMIYNYCTDTKRFPQGLPPECT 291


>emb|CAN80252.1| hypothetical protein VITISV_036642 [Vitis vinifera]
          Length = 287

 Score =  240 bits (613), Expect(2) = e-108
 Identities = 118/182 (64%), Positives = 133/182 (73%)
 Frame = +2

Query: 242 LMFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXXXXXXXXXXXXX 421
           ++F++ +L  SF+ +   NL QD  ITWGDGRAK+                         
Sbjct: 3   VLFLVSLLLGSFVVASVGNLXQDFXITWGDGRAKILNNGELLTL---------------- 46

Query: 422 XXXXXXXXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDE 601
                     SLDKTSGSGFQS+NEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDE
Sbjct: 47  ----------SLDKTSGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDE 96

Query: 602 IDFEFLGNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIIFFVDG 781
           IDFEFLGNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+LWNP  IIF VDG
Sbjct: 97  IDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFSVDG 156

Query: 782 TP 787
           TP
Sbjct: 157 TP 158



 Score =  179 bits (453), Expect(2) = e-108
 Identities = 93/161 (57%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
 Frame = +1

Query: 838  FFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTASYA 1017
            F VDGTPIR+FKNSESIGV +PKNQPM+IYSSLWNADDWATRGGLVKTDWS+APFTASY 
Sbjct: 152  FSVDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYR 211

Query: 1018 NFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKNYMIXXXXXXXX 1179
            NF A ACIW             +      W +Q LDSTSQE +K VQKN           
Sbjct: 212  NFNADACIWSSGASSCSSNTPTSTSTNTEWYSQELDSTSQERMKWVQKN----------- 260

Query: 1180 XXXXXXXXXXXXXXXXXXXYMIYNYCTDTKRFPQGLPRECS 1302
                               YMIYNYC+DTKRFPQGLP EC+
Sbjct: 261  -------------------YMIYNYCSDTKRFPQGLPPECT 282


>ref|XP_002274827.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera] gi|147802595|emb|CAN77531.1|
           hypothetical protein VITISV_019831 [Vitis vinifera]
          Length = 296

 Score =  237 bits (604), Expect(2) = e-107
 Identities = 119/193 (61%), Positives = 134/193 (69%)
 Frame = +2

Query: 209 MTCNTSCRAETLMFVIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXX 388
           MT  T+      + ++ +L  SF+ +   NL QD +ITWGDGRAK+              
Sbjct: 1   MTYPTTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDITWGDGRAKILNNGQLLTL----- 55

Query: 389 XXXXXXXXXXXXXXXXXXXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAY 568
                                SLDK SGSGF+S NEY+FGKIDMQLKLVPGNSAGTVTAY
Sbjct: 56  ---------------------SLDKASGSGFRSNNEYLFGKIDMQLKLVPGNSAGTVTAY 94

Query: 569 YLSSQGPTHDEIDFEFLGNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLW 748
           YLSSQGPTHDEIDFEFLGNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYSVLW
Sbjct: 95  YLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSVLW 154

Query: 749 NPLSIIFFVDGTP 787
           NP  IIF VDGTP
Sbjct: 155 NPQRIIFSVDGTP 167



 Score =  181 bits (459), Expect(2) = e-107
 Identities = 93/161 (57%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
 Frame = +1

Query: 838  FFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTASYA 1017
            F VDGTPIR+FKNSESIGVP+PKNQPM+IYSSLWNADDWATRGGLVKTDWS+APFTASY 
Sbjct: 161  FSVDGTPIREFKNSESIGVPYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYR 220

Query: 1018 NFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKNYMIXXXXXXXX 1179
            NF A AC+W             +      W +Q LDSTSQE +  VQKN           
Sbjct: 221  NFNANACVWSSGSSSCSSTSPSSTSTNGGWYSQELDSTSQERMTWVQKN----------- 269

Query: 1180 XXXXXXXXXXXXXXXXXXXYMIYNYCTDTKRFPQGLPRECS 1302
                               YMIYNYCTDTKRFPQGLP EC+
Sbjct: 270  -------------------YMIYNYCTDTKRFPQGLPPECT 291


>emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]
          Length = 287

 Score =  237 bits (605), Expect(2) = e-107
 Identities = 119/179 (66%), Positives = 131/179 (73%)
 Frame = +2

Query: 251 VIFMLACSFIASCAANLNQDLEITWGDGRAKMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430
           ++ ML+   +AS A N NQD +ITWGDGRAK+                            
Sbjct: 7   LVLMLSMXVVAS-AGNFNQDFDITWGDGRAKILNNGQLLTL------------------- 46

Query: 431 XXXXXXXSLDKTSGSGFQSRNEYMFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDF 610
                  SLDK SGSGFQSRNEY+FGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDF
Sbjct: 47  -------SLDKASGSGFQSRNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDF 99

Query: 611 EFLGNLTGDPYILHTNVFAQGKGSKEQQFYLWFDPTKDFHTYSVLWNPLSIIFFVDGTP 787
           EFLGNL+GDPYILHTNVF+QGKG++EQQFYLWFDPT DFHTYS+LWNP  IIF VDGTP
Sbjct: 100 EFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFSVDGTP 158



 Score =  181 bits (458), Expect(2) = e-107
 Identities = 94/161 (58%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
 Frame = +1

Query: 838  FFVDGTPIRQFKNSESIGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTASYA 1017
            F VDGTPIR+FKNSESIGV +PKNQPM+IYSSLWNADDWATRGGLVKTDWS+APFTASY 
Sbjct: 152  FSVDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRGGLVKTDWSQAPFTASYR 211

Query: 1018 NFKAQACIWXXXXXXXXXXXXDT------WLTQGLDSTSQESIKSVQKNYMIXXXXXXXX 1179
            NF A ACIW             +      W +Q LDSTSQE +K VQKN           
Sbjct: 212  NFNADACIWSSGASSCSSTTPSSTSTSGQWYSQELDSTSQERMKWVQKN----------- 260

Query: 1180 XXXXXXXXXXXXXXXXXXXYMIYNYCTDTKRFPQGLPRECS 1302
                               YMIYNYCTDTKRFPQGLP EC+
Sbjct: 261  -------------------YMIYNYCTDTKRFPQGLPPECT 282


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