BLASTX nr result

ID: Coptis25_contig00001911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001911
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314844.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
emb|CBI33631.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002314847.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003592595.1| Receptor-like kinase [Medicago truncatula] g...    96   3e-18
ref|XP_002457409.1| hypothetical protein SORBIDRAFT_03g006780 [S...    96   3e-18

>ref|XP_002314844.1| predicted protein [Populus trichocarpa] gi|222863884|gb|EEF01015.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  104 bits (260), Expect = 6e-21
 Identities = 56/105 (53%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -2

Query: 312 VLLILLVSYRKFMS-SLCSCWRDIMXXXXXXXXXXXNYKCGPQRYNYSTIKKMTNYFKET 136
           ++ I  V  RK+ S    SCWR                   P+RY+YS +KKMT  FKE 
Sbjct: 8   IITICCVIIRKYSSIHFLSCWRKTRGSQSIEVFLRNYGTLAPERYSYSELKKMTKNFKEK 67

Query: 135 LGKGGYGCVFKGQLHDGRLVAVKVLIESKGNGEDFVNEVSTIGRT 1
           LG+GG+G VFKG L DGRLVAVKVL +SK NGE+FVNEVS+IGRT
Sbjct: 68  LGQGGFGSVFKGNLLDGRLVAVKVLKKSKSNGEEFVNEVSSIGRT 112


>emb|CBI33631.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/64 (65%), Positives = 56/64 (87%)
 Frame = -2

Query: 192 PQRYNYSTIKKMTNYFKETLGKGGYGCVFKGQLHDGRLVAVKVLIESKGNGEDFVNEVST 13
           P+RYNYS +KKMTN F   LG+GG+GCV+KG+L DGR++AVK+L +SKGNG+DF+NEV++
Sbjct: 314 PKRYNYSDVKKMTNSFTSKLGEGGFGCVYKGKLPDGRMMAVKLLSKSKGNGQDFINEVAS 373

Query: 12  IGRT 1
           I RT
Sbjct: 374 ISRT 377


>ref|XP_002314847.1| predicted protein [Populus trichocarpa] gi|222863887|gb|EEF01018.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = -2

Query: 192 PQRYNYSTIKKMTNYFKETLGKGGYGCVFKGQLHDGRLVAVKVLIESKGNGEDFVNEVST 13
           P+RY+YS +KKMT  FKE LG+GGYG VFKG L DGRLVAVKVL +SK NGE+FVNEVS+
Sbjct: 22  PKRYSYSELKKMTKNFKEKLGQGGYGSVFKGNLLDGRLVAVKVLKKSKSNGEEFVNEVSS 81

Query: 12  IGRT 1
           IG T
Sbjct: 82  IGMT 85


>ref|XP_003592595.1| Receptor-like kinase [Medicago truncatula]
           gi|355481643|gb|AES62846.1| Receptor-like kinase
           [Medicago truncatula]
          Length = 327

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/62 (69%), Positives = 54/62 (87%)
 Frame = -2

Query: 186 RYNYSTIKKMTNYFKETLGKGGYGCVFKGQLHDGRLVAVKVLIESKGNGEDFVNEVSTIG 7
           RYNYS + KMTN+F+  LG+GGYG V+KG+LHD R+VAVKVL ESKG+GEDF+NEV++I 
Sbjct: 52  RYNYSDVTKMTNFFRNKLGQGGYGGVYKGKLHDERIVAVKVLSESKGDGEDFINEVASIS 111

Query: 6   RT 1
           RT
Sbjct: 112 RT 113


>ref|XP_002457409.1| hypothetical protein SORBIDRAFT_03g006780 [Sorghum bicolor]
           gi|241929384|gb|EES02529.1| hypothetical protein
           SORBIDRAFT_03g006780 [Sorghum bicolor]
          Length = 607

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/105 (50%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
 Frame = -2

Query: 306 LILLVSYRKFMSSLCSCWRDIMXXXXXXXXXXXNYKCG---PQRYNYSTIKKMTNYFKET 136
           LI  + YR+      S WR                +CG   PQRY YS +KK+T  FKE 
Sbjct: 255 LIAWLIYRRKQKFRSSFWR----ATDQSNEEEVIIRCGSLAPQRYKYSELKKITKSFKEK 310

Query: 135 LGKGGYGCVFKGQLHDGRLVAVKVLIESKGNGEDFVNEVSTIGRT 1
           LG+GGYG VFKG L DGR++AVK+L  SKGNGEDFVNEV +I +T
Sbjct: 311 LGEGGYGVVFKGSLRDGRIIAVKLLKGSKGNGEDFVNEVMSISQT 355


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