BLASTX nr result

ID: Coptis25_contig00001901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001901
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002986312.1| hypothetical protein SELMODRAFT_123864 [Sela...    59   4e-07
ref|XP_001783312.1| predicted protein [Physcomitrella patens sub...    57   2e-06
ref|XP_002987196.1| hypothetical protein SELMODRAFT_446854 [Sela...    56   3e-06
gb|ADE75895.1| unknown [Picea sitchensis]                              55   8e-06

>ref|XP_002986312.1| hypothetical protein SELMODRAFT_123864 [Selaginella moellendorffii]
           gi|302814111|ref|XP_002988740.1| hypothetical protein
           SELMODRAFT_128630 [Selaginella moellendorffii]
           gi|300143561|gb|EFJ10251.1| hypothetical protein
           SELMODRAFT_128630 [Selaginella moellendorffii]
           gi|300145848|gb|EFJ12521.1| hypothetical protein
           SELMODRAFT_123864 [Selaginella moellendorffii]
          Length = 381

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = -2

Query: 196 NQFNELPEELTERIFARLPISAVFNLRSVCKSWEKQLTSKSYLRLWNEIGNRDLWFLVY 20
           ++F+ LP++L E+IFA LP+ ++F  R+VCK W    TSKS++ L  ++     W+L+Y
Sbjct: 23  DEFSSLPDDLLEKIFAALPLLSLFRARAVCKRWHGITTSKSFMALCAQVTTHKPWYLMY 81


>ref|XP_001783312.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162665164|gb|EDQ51857.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 861

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
 Frame = -2

Query: 181 LPEELTERIFARLPISAVFNLRSVCKSWEKQLTSKSYLRLWNEIGNRDLW-FLVY--HTN 11
           LPE+L +R  A LP+ + F  RSVCK W   L + S+L LW+++ ++ LW F +Y  H  
Sbjct: 388 LPEDLIDRTLACLPVPSFFRFRSVCKRWNTLLKTNSFLELWSDVVSQQLWLFSIYAKHPT 447

Query: 10  RMI 2
            M+
Sbjct: 448 EMV 450


>ref|XP_002987196.1| hypothetical protein SELMODRAFT_446854 [Selaginella moellendorffii]
           gi|300145093|gb|EFJ11772.1| hypothetical protein
           SELMODRAFT_446854 [Selaginella moellendorffii]
          Length = 863

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/58 (37%), Positives = 40/58 (68%)
 Frame = -2

Query: 190 FNELPEELTERIFARLPISAVFNLRSVCKSWEKQLTSKSYLRLWNEIGNRDLWFLVYH 17
           +++LPE++T  I ARLP+  +  +R+VCK WE  + S  +L+L +++ +R  W+L +H
Sbjct: 443 WSQLPEDMTRIILARLPLPNLLQVRTVCKKWEATIRSPPFLKLCSDLPSRAPWYLGFH 500


>gb|ADE75895.1| unknown [Picea sitchensis]
          Length = 445

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = -2

Query: 184 ELPEELTERIFARLPISAVFNLRSVCKSWEKQLTSKSYLRLWNEIGNRDLWF 29
           EL E+L  R+ ARLP+S+ F  RSVCK W   + S S+L   +E+ +R  WF
Sbjct: 64  ELHEDLLARVLARLPVSSFFRFRSVCKGWNSMMYSPSFLNACSEVPSRCPWF 115


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