BLASTX nr result

ID: Coptis25_contig00001889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001889
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis] gi...   179   4e-43
ref|XP_004144463.1| PREDICTED: protein MOS2-like [Cucumis sativus]    166   6e-39
ref|XP_004169661.1| PREDICTED: protein MOS2-like [Cucumis sativus]    164   1e-38
ref|NP_174617.1| protein MOS2 [Arabidopsis thaliana] gi|75169419...   159   5e-37
ref|XP_002893773.1| hypothetical protein ARALYDRAFT_890931 [Arab...   159   6e-37

>ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis]
           gi|223537810|gb|EEF39428.1| Protein MOS2, putative
           [Ricinus communis]
          Length = 479

 Score =  179 bits (455), Expect = 4e-43
 Identities = 98/201 (48%), Positives = 131/201 (65%), Gaps = 6/201 (2%)
 Frame = -3

Query: 728 LSFSLSSKPNPNNKRRPSSSTFSLQETDPSSQQQQFVIEFDPSKPSILINNNTHVIPRLE 549
           LSFS+ +K +  +  +P  S     ET  +   +QFV EFDPSK   L   N  +IP  E
Sbjct: 3   LSFSIPAKSSSKSTSKPKFSASVDAETQTNGTDKQFVTEFDPSKT--LTKQNRIIIPPKE 60

Query: 548 NTWNPYKKMKNINT-PLQNIQDPN-LTFELETPALNMDTDPSMSYGINIR----DKNIEE 387
           N W P+KKMKN+   P     DP+ L FE+ T A + D D SMSYG+N+R    D   + 
Sbjct: 61  NEWRPHKKMKNLALLPSLQSSDPDALRFEIATDADDGD-DKSMSYGLNVRAAGEDDGGKS 119

Query: 386 EKRVGYNPVENVLLKKFKEDMKNLPDDRGMDEFEDVPVEGFGVAILKGYGWKEGQGIGKN 207
           +++      EN++L+K + D++ LP+DRG DEF+DVPVEGFG A+L GYGW+EG+GIG+N
Sbjct: 120 QQQKKPESTENIMLEKLRYDLERLPEDRGFDEFKDVPVEGFGAALLAGYGWREGRGIGRN 179

Query: 206 AKEDVKMVQYVKRGNKEGLGF 144
           AKEDVK+ QY KR +KEGLGF
Sbjct: 180 AKEDVKVKQYTKRTDKEGLGF 200


>ref|XP_004144463.1| PREDICTED: protein MOS2-like [Cucumis sativus]
          Length = 500

 Score =  166 bits (419), Expect = 6e-39
 Identities = 97/246 (39%), Positives = 143/246 (58%), Gaps = 24/246 (9%)
 Frame = -3

Query: 737 TTMLSFSLSSKPNPNNKR----RPSSSTFSLQETD--PSSQQQQFVIEFDPSKPSILINN 576
           T  LSFSL SK + ++ +    +PS   F  +  D  P +  +Q+V EFD SKP      
Sbjct: 22  TMKLSFSLPSKSSSSSSKPNLVKPSKE-FDDKTLDHGPLNDSKQYVNEFDASKPLSETTG 80

Query: 575 NTH--VIPRLENTWNPYKKMKNINTPLQNIQDPNLTFELETPALNMDTDPSMSYGINIRD 402
            +   VIP L+N W P K+MKN+  PL    + +L FE  +    +D D  MSYG+N+R 
Sbjct: 81  KSRNLVIPSLQNEWRPLKRMKNLEVPLDQSDESHLKFESASGLDPLD-DSKMSYGLNVRQ 139

Query: 401 K----NIEEEKRVGYNP-----VENVLLKKFKEDMKNLPDDRGMDEFEDVPVEGFGVAIL 249
                 I +E + G  P     +E ++L+KFK D++ LP+DRG ++FE+VPVE F  A++
Sbjct: 140 SVDGMKISDESKSGEEPPRPAPLEVIMLEKFKADLERLPEDRGFEDFEEVPVESFAAALM 199

Query: 248 KGYGWKEGQGIGKNAKEDVKMVQYVKRGNKEGLGFQPDKPTFDKK-------GRDLAPKG 90
            GYGW++G+GIG+NAKEDVK+ +Y +R +K+GLGF  D P    K       GR+   K 
Sbjct: 200 NGYGWRQGKGIGRNAKEDVKVREYSRRTDKQGLGFVSDVPVGISKKEEEKDGGRERERKR 259

Query: 89  ENGKTR 72
           + G+ +
Sbjct: 260 DEGRVK 265


>ref|XP_004169661.1| PREDICTED: protein MOS2-like [Cucumis sativus]
          Length = 478

 Score =  164 bits (416), Expect = 1e-38
 Identities = 96/243 (39%), Positives = 142/243 (58%), Gaps = 24/243 (9%)
 Frame = -3

Query: 728 LSFSLSSKPNPNNKR----RPSSSTFSLQETD--PSSQQQQFVIEFDPSKPSILINNNTH 567
           LSFSL SK + ++ +    +PS   F  +  D  P +  +Q+V EFD SKP       + 
Sbjct: 3   LSFSLPSKSSSSSSKPNLVKPSKE-FDDKTLDHGPLNDSKQYVNEFDASKPLSETTGKSR 61

Query: 566 --VIPRLENTWNPYKKMKNINTPLQNIQDPNLTFELETPALNMDTDPSMSYGINIRDK-- 399
             VIP L+N W P K+MKN+  PL    + +L FE  +    +D D  MSYG+N+R    
Sbjct: 62  NLVIPSLQNEWRPLKRMKNLEVPLDQSDESHLKFESASGLDPLD-DSKMSYGLNVRQSVD 120

Query: 398 --NIEEEKRVGYNP-----VENVLLKKFKEDMKNLPDDRGMDEFEDVPVEGFGVAILKGY 240
              I +E + G  P     +E ++L+KFK D++ LP+DRG ++FE+VPVE F  A++ GY
Sbjct: 121 GMKISDESKSGEEPPRPAPLEVIMLEKFKADLERLPEDRGFEDFEEVPVESFAAALMNGY 180

Query: 239 GWKEGQGIGKNAKEDVKMVQYVKRGNKEGLGFQPDKPTFDKK-------GRDLAPKGENG 81
           GW++G+GIG+NAKEDVK+ +Y +R +K+GLGF  D P    K       GR+   K + G
Sbjct: 181 GWRQGKGIGRNAKEDVKVREYSRRTDKQGLGFVSDVPVGISKKEEEKDGGRERERKRDEG 240

Query: 80  KTR 72
           + +
Sbjct: 241 RVK 243


>ref|NP_174617.1| protein MOS2 [Arabidopsis thaliana]
           gi|75169419|sp|Q9C801.1|MOS2_ARATH RecName: Full=Protein
           MOS2 gi|12322393|gb|AAG51225.1|AC051630_22 unknown
           protein; 82634-81246 [Arabidopsis thaliana]
           gi|20259490|gb|AAM13865.1| unknown protein [Arabidopsis
           thaliana] gi|29824125|gb|AAP04023.1| unknown protein
           [Arabidopsis thaliana] gi|77176696|gb|ABA64466.1|
           putative nucleic-acid binding protein [Arabidopsis
           thaliana] gi|332193481|gb|AEE31602.1| protein MOS2
           [Arabidopsis thaliana]
          Length = 462

 Score =  159 bits (403), Expect = 5e-37
 Identities = 99/259 (38%), Positives = 147/259 (56%), Gaps = 17/259 (6%)
 Frame = -3

Query: 728 LSFSLSSKPNPNNKRRPSSSTFSLQETDPSSQQQQFVIEFDPSKPSILINNNTHVIPRLE 549
           LSFSL SK  P    + +++T            ++FV EFDPSK ++  +   +VIP +E
Sbjct: 3   LSFSLPSKSKP----KVTATTADGNNAVDDGTSKEFVTEFDPSK-TLANSIPKYVIPPIE 57

Query: 548 NTWNPYKKMKNINTPLQNIQ-DPNLTFELETPALNMDTDPSMSYGINIRDK--------N 396
           NTW P+KKMKN++ PLQ+      L FE E P    +   ++SYG+N+R K        +
Sbjct: 58  NTWRPHKKMKNLDLPLQSGNAGSGLEFEPEVPLPGTEKPDNISYGLNLRQKVKDDSIGGD 117

Query: 395 IEEEKRVGYNPVENVLLKKFKEDMKNLPDDRGMDEFEDVPVEGFGVAILKGYGWKEGQGI 216
             EE++V     E ++L+  + D+ +L DD  +++FE VPV+GFG A++ GYGWK G+GI
Sbjct: 118 AVEERKVSMG--EQLMLQSLRRDLMSLADDPTLEDFESVPVDGFGAALMAGYGWKPGKGI 175

Query: 215 GKNAKEDVKMVQYVKRGNKEGLGFQPDK-PTFDKKGR-------DLAPKGENGKTRHVIG 60
           GKNAKEDV++ +Y K   KEGLGF PD+    D K +       D    G NG     +G
Sbjct: 176 GKNAKEDVEIKEYKKWTAKEGLGFDPDRSKVVDVKAKVKESVKLDKKGVGINGGDVFFVG 235

Query: 59  IDGKLVVRELKGIHVGKVV 3
            + +++     G+  GK+V
Sbjct: 236 KEVRIIAGRDVGLK-GKIV 253


>ref|XP_002893773.1| hypothetical protein ARALYDRAFT_890931 [Arabidopsis lyrata subsp.
           lyrata] gi|297339615|gb|EFH70032.1| hypothetical protein
           ARALYDRAFT_890931 [Arabidopsis lyrata subsp. lyrata]
          Length = 461

 Score =  159 bits (402), Expect = 6e-37
 Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 19/261 (7%)
 Frame = -3

Query: 728 LSFSLSSKPNPNNKRRPSSSTFSLQETDPSSQQQQFVIEFDPSKPSILINNNT--HVIPR 555
           LSFSL SK  P       ++T            ++FV EFDPSK    ++N+   +VIP 
Sbjct: 3   LSFSLPSKSKPK-----VTATTDANNAVDDGTSKEFVTEFDPSKT---LSNSIPKYVIPP 54

Query: 554 LENTWNPYKKMKNINTPLQNIQDPN-LTFELETPALNMDTDPSMSYGINIRDKNIE---- 390
           +ENTW P+KKMKN++ PLQ+    + L FE E P    +   +++YG+N+R K  E    
Sbjct: 55  IENTWRPHKKMKNLDLPLQSGNTGSGLEFEPEVPLPGHERPDNITYGLNLRQKVKEDSIG 114

Query: 389 ----EEKRVGYNPVENVLLKKFKEDMKNLPDDRGMDEFEDVPVEGFGVAILKGYGWKEGQ 222
               E+++V     E ++L+  ++D+++L DD  +++FE VPVEGFG A++ GYGWK G+
Sbjct: 115 GDAIEDRKVSMG--EQLMLQSLRKDLQSLADDPTLEDFESVPVEGFGAALMAGYGWKPGK 172

Query: 221 GIGKNAKEDVKMVQYVKRGNKEGLGFQPDK-PTFDKKGR-------DLAPKGENGKTRHV 66
           GIGKNAKEDV++ +Y K   KEGLGF PD+    D K R       D    G NG     
Sbjct: 173 GIGKNAKEDVEIKEYKKWTAKEGLGFDPDRSKVVDVKVRGKESVKLDKMGVGVNGGDVFF 232

Query: 65  IGIDGKLVVRELKGIHVGKVV 3
           +G + +++     G+  GK+V
Sbjct: 233 VGKEVRIIAGRDVGLK-GKIV 252


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