BLASTX nr result

ID: Coptis25_contig00001888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001888
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   101   7e-20
emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]    97   1e-18
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    97   2e-18
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    93   3e-17
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                79   3e-13

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  101 bits (251), Expect = 7e-20
 Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
 Frame = -3

Query: 518  ELPKDVLALIACKLIHINDFIRFGAVSKLWRSVYIEENRSYVVNRQVPMLMLTTELNSDG 339
            ++P D L LIA KL  + D++RFG V K W S++ E+      + + P LML  + NS+ 
Sbjct: 924  KMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIF-EDKECCCPSSKSPWLMLAEKENSE- 981

Query: 338  KTRSFHSLSEKRVCNFQVQLPH--DRYCAGSIYGWLVTVSENYDVCLFNPFLSVDNEIHL 165
              R F+S    +V  ++++LP    ++C GS YGWLVT+  + D+CL NP   V  +I L
Sbjct: 982  -IRGFYSPLSGKV--YEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRV--QILL 1036

Query: 164  PSLKTLEALNE--EDEIFGVH----YLERVALSANPSANRDFVAMAVYGQFGRLAFCKPG 3
            PSL+    LN   +    G      ++ +  LS+ PS + D   M +Y  +GRLAF KPG
Sbjct: 1037 PSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPS-SPDCAVMIIYSDYGRLAFTKPG 1095


>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
 Frame = -3

Query: 518 ELPKDVLALIACKLIHINDFIRFGAVSKLWRSVYIEENRSYVVNRQVPMLMLTTELNSDG 339
           +LPK+++ LI  +L H  D IRFG V + W  V +E  +      +    ML    N D 
Sbjct: 8   KLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLPPNKDD 67

Query: 338 KTRSFHSLSEKRVCNFQVQLPHDRYCAGSIYGWLVTVSEN--YDVCLFNPFLSVDNEIHL 165
           +    +   +K+    Q+    D++C  S  GWL+T++    Y++C  NP   V  +I L
Sbjct: 68  EAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPISGV--QIDL 125

Query: 164 PSLKTLE-ALNEEDEIFGVHYLERVALSANPS-ANRDFVAMAVYGQFGRLAFCKPG 3
           P   T E +  + DE     +L +V LS+ PS +N + V MA++  + +LAFCKPG
Sbjct: 126 PPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYKKLAFCKPG 181


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
 Frame = -3

Query: 518 ELPKDVLALIACKLIHINDFIRFGAVSKLWRSVYIEENRSYVVNRQVPMLMLTTELNSDG 339
           +LPK+++ LI  +L H  D IRFG V + W  V +E  +      +    ML    N D 
Sbjct: 8   KLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLPPNKDD 67

Query: 338 KTRSFHSLSEKRVCNFQVQLPHDRYCAGSIYGWLVTVSEN--YDVCLFNPFLSVDNEIHL 165
                +   +K+    Q+    D++C  S  GWL+T++    Y++C  NP   V  +I L
Sbjct: 68  GAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPISGV--QIDL 125

Query: 164 PSLKTLE-ALNEEDEIFGVHYLERVALSANPS-ANRDFVAMAVYGQFGRLAFCKPG 3
           P   T E +  + DE     +L +V LS+ PS +N + V MA++  + +LAFCKPG
Sbjct: 126 PPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYNKLAFCKPG 181


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 68/181 (37%), Positives = 99/181 (54%), Gaps = 10/181 (5%)
 Frame = -3

Query: 515 LPKDVLALIACKLIHINDFIRFGAVSKLWRSVYIEENRSYVVNRQ-------VPMLMLTT 357
           LP D+L  I   L  I D IRFGAV   W S+ ++  +   VN++       +P LM+ +
Sbjct: 136 LPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWLMVLS 195

Query: 356 ELNSDGKTRSFHSLSEKRVCNFQVQLPHD-RYCAGSIYGWLVTVSENYDVCLFNPFLSVD 180
           + NS   +RSF+S++ +++  F + +P   RYC GS +GWL+T  E   V L +PF    
Sbjct: 196 KPNSKD-SRSFYSITHQKLSKFHLPVPPGTRYC-GSSHGWLITTDETNAVSLLHPFSR-- 251

Query: 179 NEIHLPSLKTLEALNEEDEIFGVHY-LERVALSANPSAN-RDFVAMAVYGQFGRLAFCKP 6
             I LP L  L+    +  ++G  Y L +  LSANP++N  DFV M +YG    LAF K 
Sbjct: 252 QVIRLPPLTRLKI--PQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAFIKS 309

Query: 5   G 3
           G
Sbjct: 310 G 310


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 57/172 (33%), Positives = 84/172 (48%)
 Frame = -3

Query: 518 ELPKDVLALIACKLIHINDFIRFGAVSKLWRSVYIEENRSYVVNRQVPMLMLTTELNSDG 339
           EL  D+L  I   L  I D++ FG V K W SV  + N +  + R  P LML  E   D 
Sbjct: 6   ELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVATKANFNNDLCR-APWLMLAEE--EDN 62

Query: 338 KTRSFHSLSEKRVCNFQVQLPHDRYCAGSIYGWLVTVSENYDVCLFNPFLSVDNEIHLPS 159
           + R F SL    + N ++     + C  S+ GWL+TV E  ++ L +PF  V  +I LP 
Sbjct: 63  EVRKFFSLYNGMILNKRIPKASRKRCLESM-GWLITVGEEGEISLLHPFSDV--QIELPH 119

Query: 158 LKTLEALNEEDEIFGVHYLERVALSANPSANRDFVAMAVYGQFGRLAFCKPG 3
             T    N+        ++ +  LSA+PS   D++ M + G    L+F +PG
Sbjct: 120 QNTTVEYNKHQTGALTCFIGKAVLSASPSHTSDYLLMVIDGGSRFLSFWRPG 171


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