BLASTX nr result
ID: Coptis25_contig00001884
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001884
(2061 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272844.1| PREDICTED: uncharacterized protein LOC100264... 437 e-120
ref|XP_003633256.1| PREDICTED: uncharacterized protein LOC100264... 437 e-120
ref|XP_003539923.1| PREDICTED: uncharacterized protein LOC100810... 412 e-112
ref|XP_002517918.1| structural constituent of cell wall, putativ... 412 e-112
ref|XP_002325597.1| predicted protein [Populus trichocarpa] gi|2... 409 e-111
>ref|XP_002272844.1| PREDICTED: uncharacterized protein LOC100264321 isoform 1 [Vitis
vinifera]
Length = 550
Score = 437 bits (1124), Expect = e-120
Identities = 265/552 (48%), Positives = 331/552 (59%), Gaps = 23/552 (4%)
Frame = +2
Query: 170 MASGSS----TGRRGFDFGTDDVLCSYDDFTSQDISNGKKHIDPVNTNDHSKDFRESRMG 337
MASGSS +G +GFDF +DD+LCSYD+F++Q+ SNG H DP + KDF ++RM
Sbjct: 1 MASGSSGRAGSGSKGFDFASDDILCSYDEFSNQESSNGT-HSDPAS----GKDFHKARMS 55
Query: 338 RSAFLP---VYNQPEES-LHQELISTVEKTMKKYADNLLRFLEGISARLSQLELYCYNLE 505
RS+ P VY Q EES L+QE+ISTVEKT+KKYADNL+RFLEGIS+RLSQLELYCYNL+
Sbjct: 56 RSSLFPASNVYGQQEESSLNQEMISTVEKTVKKYADNLMRFLEGISSRLSQLELYCYNLD 115
Query: 506 KSIGEMRSDLLRENRESDAKLSTLEKHLQEVHRSIQILRDKQELADTQKELAKLQLVHKE 685
KSIGEMRSDL+R++ E+D+KL +L+KH+QEVHRS+QILRDKQELAD QKELAKLQLV KE
Sbjct: 116 KSIGEMRSDLVRDHGEADSKLKSLDKHIQEVHRSVQILRDKQELADAQKELAKLQLVQKE 175
Query: 686 SSTVSHSQHKEEVVTPSTSDPQKLDNPPEVQKQQLALALPHQVIPPTSHPSRSMDQHPSM 865
SST SHSQ++E TP+ SDP+K D +V QQLALALPHQV P + +R ++Q +
Sbjct: 176 SSTSSHSQNEERAATPA-SDPKKPDKMSDVHNQQLALALPHQVAPQPALSTRPVEQQQPV 234
Query: 866 APSPQIPSQNVXXXXXXXXXXXXXXMSTPLQTQQPQDRYLQADSQYQRPQLQ-ISQPSAQ 1042
A Q P QN+ +T QTQ PQ +YL +D QY+ QLQ I + + Q
Sbjct: 235 AAPTQSPPQNITQSPSYYLPSTQLPNAT-AQTQHPQSQYLPSDPQYRTQQLQDIPRVAPQ 293
Query: 1043 PLQSHGSQAPPVHPFTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1222
P QS +QAP V F Y
Sbjct: 294 PAQSQVNQAPQVPSFPQYQQQWPQQMTQQMPQQMPQQVQMPQQPSMQPQNRPPTTTVYPP 353
Query: 1223 XXXXXXET-------YPGNLSIQVPSSGIPQPGAGRSEAVNYGYGGINRATVQQQPSQHN 1381
T P ++ +Q+ SGI QPGA R++ + YGYG R QQ P QH
Sbjct: 354 YSAPAQPTNASPPEMLPSSMPMQMSFSGISQPGASRADTLPYGYGAAGRPVPQQPPPQH- 412
Query: 1382 MQRPQQHSFGSAVGDNIYPVSGSLSARTPREGYMVYNGEGGSTSHPVPTHFPQGGYPPSI 1561
+ +FG+ GD Y SG A P YM+Y+ E + P P HFPQG YPP
Sbjct: 413 ----IKGTFGTQPGD-AYAASGPHPALHPGNAYMMYDNEARAHHPPQPPHFPQGVYPPVS 467
Query: 1562 SSVQNPPPVRQTSPSPMMRN-------NNPYNELIEKAVSMGYGRDFVVHVINTMAMSGQ 1720
S QNP P + M+RN N+PYNE IEK ++MGY D VV+VI M SGQ
Sbjct: 468 VSSQNPQPT--VGSNLMVRNSGQPPPRNHPYNEWIEKLMNMGYRGDHVVNVIQRMEESGQ 525
Query: 1721 PMDFNTLLDRLN 1756
P+DFN+LLDRLN
Sbjct: 526 PIDFNSLLDRLN 537
>ref|XP_003633256.1| PREDICTED: uncharacterized protein LOC100264321 isoform 2 [Vitis
vinifera]
Length = 560
Score = 437 bits (1123), Expect = e-120
Identities = 265/558 (47%), Positives = 333/558 (59%), Gaps = 29/558 (5%)
Frame = +2
Query: 170 MASGSS----TGRRGFDFGTDDVLCSYDDFTSQDISNGKKHIDPVNTN------DHSKDF 319
MASGSS +G +GFDF +DD+LCSYD+F++Q+ SNG H DP + D+ +DF
Sbjct: 1 MASGSSGRAGSGSKGFDFASDDILCSYDEFSNQESSNGT-HSDPASGKFTILVFDNEQDF 59
Query: 320 RESRMGRSAFLP---VYNQPEES-LHQELISTVEKTMKKYADNLLRFLEGISARLSQLEL 487
++RM RS+ P VY Q EES L+QE+ISTVEKT+KKYADNL+RFLEGIS+RLSQLEL
Sbjct: 60 HKARMSRSSLFPASNVYGQQEESSLNQEMISTVEKTVKKYADNLMRFLEGISSRLSQLEL 119
Query: 488 YCYNLEKSIGEMRSDLLRENRESDAKLSTLEKHLQEVHRSIQILRDKQELADTQKELAKL 667
YCYNL+KSIGEMRSDL+R++ E+D+KL +L+KH+QEVHRS+QILRDKQELAD QKELAKL
Sbjct: 120 YCYNLDKSIGEMRSDLVRDHGEADSKLKSLDKHIQEVHRSVQILRDKQELADAQKELAKL 179
Query: 668 QLVHKESSTVSHSQHKEEVVTPSTSDPQKLDNPPEVQKQQLALALPHQVIPPTSHPSRSM 847
QLV KESST SHSQ++E TP+ SDP+K D +V QQLALALPHQV P + +R +
Sbjct: 180 QLVQKESSTSSHSQNEERAATPA-SDPKKPDKMSDVHNQQLALALPHQVAPQPALSTRPV 238
Query: 848 DQHPSMAPSPQIPSQNVXXXXXXXXXXXXXXMSTPLQTQQPQDRYLQADSQYQRPQLQ-I 1024
+Q +A Q P QN+ +T QTQ PQ +YL +D QY+ QLQ I
Sbjct: 239 EQQQPVAAPTQSPPQNITQSPSYYLPSTQLPNAT-AQTQHPQSQYLPSDPQYRTQQLQDI 297
Query: 1025 SQPSAQPLQSHGSQAPPVHPFTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1204
+ + QP QS +QAP V F Y
Sbjct: 298 PRVAPQPAQSQVNQAPQVPSFPQYQQQWPQQMTQQMPQQMPQQVQMPQQPSMQPQNRPPT 357
Query: 1205 XXXXXXXXXXXXET-------YPGNLSIQVPSSGIPQPGAGRSEAVNYGYGGINRATVQQ 1363
T P ++ +Q+ SGI QPGA R++ + YGYG R QQ
Sbjct: 358 TTVYPPYSAPAQPTNASPPEMLPSSMPMQMSFSGISQPGASRADTLPYGYGAAGRPVPQQ 417
Query: 1364 QPSQHNMQRPQQHSFGSAVGDNIYPVSGSLSARTPREGYMVYNGEGGSTSHPVPTHFPQG 1543
P QH + +FG+ GD Y SG A P YM+Y+ E + P P HFPQG
Sbjct: 418 PPPQH-----IKGTFGTQPGD-AYAASGPHPALHPGNAYMMYDNEARAHHPPQPPHFPQG 471
Query: 1544 GYPPSISSVQNPPPVRQTSPSPMMRN-------NNPYNELIEKAVSMGYGRDFVVHVINT 1702
YPP S QNP P + M+RN N+PYNE IEK ++MGY D VV+VI
Sbjct: 472 VYPPVSVSSQNPQPT--VGSNLMVRNSGQPPPRNHPYNEWIEKLMNMGYRGDHVVNVIQR 529
Query: 1703 MAMSGQPMDFNTLLDRLN 1756
M SGQP+DFN+LLDRLN
Sbjct: 530 MEESGQPIDFNSLLDRLN 547
>ref|XP_003539923.1| PREDICTED: uncharacterized protein LOC100810231 isoform 2 [Glycine
max]
Length = 541
Score = 412 bits (1058), Expect = e-112
Identities = 249/552 (45%), Positives = 323/552 (58%), Gaps = 21/552 (3%)
Frame = +2
Query: 170 MASGSS----TGRRGFDFGTDDVLCSYDDFTSQDISNGKKHIDPVNTNDHSKDFRESRMG 337
MASGSS + +GFDF +DD+LCSYDD+ ++D S+ H DPV + + DF +SR
Sbjct: 1 MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSSSNGNHTDPVIAPNSTNDFHKSR-- 58
Query: 338 RSAFLPVYNQPEESLHQELISTVEKTMKKYADNLLRFLEGISARLSQLELYCYNLEKSIG 517
R YN PE+SL Q++I+TVEK+MKKYADNL+RFLEGIS+RLSQLELYCYNL+KSIG
Sbjct: 59 RMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIG 118
Query: 518 EMRSDLLRENRESDAKLSTLEKHLQEVHRSIQILRDKQELADTQKELAKLQLVHKESSTV 697
EM+ D+ R++ E +++L +LEKH+QEVHRS+QILRDKQELA+TQKELAKLQL KESS+
Sbjct: 119 EMKCDINRDHVEQESRLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSS 178
Query: 698 SHSQHKEEVVTPSTSDPQKLDNPPEVQKQQLALALPHQVIPPTSHPSRSMDQHPSMAPSP 877
SHSQ EE +P T+DP+K DN + QQLALALPHQ+ P P+ + Q + AP+P
Sbjct: 179 SHSQSNEERSSP-TTDPKKTDNASDANNQQLALALPHQIAPQPQPPAPQV-QAQAQAPAP 236
Query: 878 ---QIPSQNVXXXXXXXXXXXXXXMSTPLQTQQPQDRYLQADSQYQRPQLQISQPSAQPL 1048
Q+P Q + P Q PQ++YL +D QY+ PQ QP+ P
Sbjct: 237 NVTQVPQQ-------PPYYMPPTPLPNPAVPQHPQNQYLPSDQQYRTPQHVAPQPT--PS 287
Query: 1049 QSHGSQAPPVHPFTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1228
Q S PV F+ Y
Sbjct: 288 QVTPS---PVQQFSHYQQQQQQPQQQQPQQQQQWSQQVLPSQPPPMQSQVRPPSPNVYPP 344
Query: 1229 XXXXETYPGNLSIQVPSS--------GIPQPGAGRSEAVNYGYGGINRATVQQQPSQHNM 1384
+ + + +P+S G+P PG+ R++A+ YGYGG R QQ P Q
Sbjct: 345 YQPNQATNPSPAETLPNSMAMQMPYSGVPPPGSSRTDAIPYGYGGAGRTVPQQPPPQ--- 401
Query: 1385 QRPQQHSFGSAVGDNIYPVSGSLSARTPREG-YMVYNGEGGSTSHPVPTHFPQGGYPPSI 1561
Q S A ++Y SG+L A P G YM+Y+GEGG T HP HF Q GYPP+
Sbjct: 402 ---QMKSSFPAPPADMYGPSGNLPALPPPSGAYMMYDGEGGRTHHPPQPHFAQPGYPPTS 458
Query: 1562 SSVQNPPP-----VRQTSPSPMMRNNNPYNELIEKAVSMGYGRDFVVHVINTMAMSGQPM 1726
+S+QNPPP VR + S +R N+PYNELIEK VSMG+ D V VI M SGQ +
Sbjct: 459 ASLQNPPPGLNLMVRNPNQSQFIR-NHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAI 517
Query: 1727 DFNTLLDRLNMH 1762
DFN++LDRLN+H
Sbjct: 518 DFNSVLDRLNVH 529
>ref|XP_002517918.1| structural constituent of cell wall, putative [Ricinus communis]
gi|223542900|gb|EEF44436.1| structural constituent of
cell wall, putative [Ricinus communis]
Length = 536
Score = 412 bits (1058), Expect = e-112
Identities = 245/544 (45%), Positives = 322/544 (59%), Gaps = 15/544 (2%)
Frame = +2
Query: 170 MASGSS----TGRRGFDFGTDDVLCSYDDFTSQDISNGKKHIDPVNTNDHSKDFRESRMG 337
MASGSS +G +GFDFGTDD+LCSY+D+ ++D +NG H DPV ++ +KD+ +SRM
Sbjct: 1 MASGSSDRSNSGSKGFDFGTDDILCSYEDYGNKDSTNGS-HSDPVIVSNSTKDYHKSRMS 59
Query: 338 RSAFLPV--YNQPEESLHQELISTVEKTMKKYADNLLRFLEGISARLSQLELYCYNLEKS 511
RS+ Y+QPE+S Q++IS VE++MKK+ D L+RFLEG+S+RLSQLEL CYNL+KS
Sbjct: 60 RSSLFHASSYSQPEDSFSQDVISVVERSMKKHTDGLMRFLEGVSSRLSQLELNCYNLDKS 119
Query: 512 IGEMRSDLLRENRESDAKLSTLEKHLQEVHRSIQILRDKQELADTQKELAKLQLVHKESS 691
IGEMRSDL+R + D+KL +LEKHLQEVHRS+QILRDKQELADTQKELAKLQLV KE S
Sbjct: 120 IGEMRSDLVRHRADGDSKLKSLEKHLQEVHRSVQILRDKQELADTQKELAKLQLVQKEPS 179
Query: 692 TVSHSQHKEEVVTPSTSDPQKLDNPPEVQKQQLALALPHQVIP-PTSHPSRSMDQHPSMA 868
+ SHSQ EE +P +DP+K DN PE+ QQLALALPHQ++P P S P +
Sbjct: 180 SSSHSQ-AEEKASPPATDPKKTDNTPEIHSQQLALALPHQIVPQPQSAP---------VP 229
Query: 869 PSPQIPSQNVXXXXXXXXXXXXXXMSTPLQTQQPQDRYLQADSQYQRPQLQ-ISQPSAQP 1045
P Q P QNV + P Q Q PQ Y+ AD QY PQ+Q +++ + QP
Sbjct: 230 PPSQAPPQNVTQQQSYYLPPAQLP-NPPAQAQHPQGPYMSADPQYGTPQIQDMTRVAPQP 288
Query: 1046 LQSHGSQAPPVHPFTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1225
Q+ +Q PP FT Y
Sbjct: 289 AQTQINQTPPGPQFTQY-QHQWPQQLPQQVQAPQQPPMQPQMRPSSPAVYPTYPPQGQPT 347
Query: 1226 XXXXXETYPGNLSIQVPSSGIPQPGAGRSEAVNYGYGGINRATVQQQPSQHNMQRPQQHS 1405
ET ++ +Q+ + +PQP + ++A+ YGYG TV QQP ++ +
Sbjct: 348 NSSPPETMSSSMPMQLSYAAVPQPLSSGTDAIPYGYGA--GRTVPQQPQAQQVKA----A 401
Query: 1406 FGSAVGDNIYPVSGSLSARTPREGYMVYNGEGGSTSH-PVPTHFPQGGYPPSISSVQNP- 1579
+G+ GD Y G SA P YM+Y+ EGG H P HF QGGYPP+ S+QNP
Sbjct: 402 YGAPPGDG-YATGGPHSALPPGSAYMMYDSEGGRAHHPPQQPHFSQGGYPPTNLSLQNPQ 460
Query: 1580 --PPVRQTSPSPMMRN---NNPYNELIEKAVSMGYGRDFVVHVINTMAMSGQPMDFNTLL 1744
P + +P N N+PY+ELI+K VSMG+ + +V VI M SGQP+DFN +L
Sbjct: 461 SAPGTNMMARNPSHANFVRNHPYSELIDKLVSMGFRAEHIVGVIQRMEESGQPLDFNAVL 520
Query: 1745 DRLN 1756
DRL+
Sbjct: 521 DRLS 524
>ref|XP_002325597.1| predicted protein [Populus trichocarpa] gi|222862472|gb|EEE99978.1|
predicted protein [Populus trichocarpa]
Length = 537
Score = 409 bits (1052), Expect = e-111
Identities = 251/544 (46%), Positives = 324/544 (59%), Gaps = 14/544 (2%)
Frame = +2
Query: 170 MASGSS----TGRRGFDFGTDDVLCSYDDF--TSQDISNGKKHIDPVNTNDHSKDFRESR 331
MASGSS +G +GFDFGTDD+LCSY+D+ +QD SNG H DPV ++ SKDF +S+
Sbjct: 1 MASGSSGRANSGSKGFDFGTDDILCSYEDYGTNNQDSSNGS-HSDPVIGSNSSKDFHKSK 59
Query: 332 MGRSAFLPV--YNQPEESLH--QELISTVEKTMKKYADNLLRFLEGISARLSQLELYCYN 499
M RS+ P Y+QPE+S H +++STVEK MKK+ DN++RFLEGIS+RLSQLEL CYN
Sbjct: 60 MTRSSVYPASSYSQPEDSFHFSPDVVSTVEKGMKKHTDNIMRFLEGISSRLSQLELSCYN 119
Query: 500 LEKSIGEMRSDLLRENRESDAKLSTLEKHLQEVHRSIQILRDKQELADTQKELAKLQLVH 679
L+K+IG+MRSD +R+N E+D KL +LEKH+QEVHRS+QILRDKQELA+TQKELAKLQL
Sbjct: 120 LDKAIGDMRSDSIRDNEEADLKLKSLEKHIQEVHRSVQILRDKQELAETQKELAKLQLAQ 179
Query: 680 KESSTVSHSQHKEEVVTPSTSDPQKLDNPPEVQKQQLALALPHQVIPPTSHPSRSMDQH- 856
KE S+ S SQ EE P+ SDP+ DN +++ QQLALALPHQV P QH
Sbjct: 180 KEPSSSSQSQSNEEKAPPAASDPKATDNASDIRNQQLALALPHQVAP---------QQHA 230
Query: 857 PSMAPSPQIPSQNVXXXXXXXXXXXXXXMSTP-LQTQQPQDRYLQADSQYQRPQLQ-ISQ 1030
P + P Q P QNV + TP Q PQ++YL +D QY+ PQ+Q +S+
Sbjct: 231 PPVPPLSQAPPQNV--TQQQSYYLPPAQLPTPAAPIQHPQNQYLPSDPQYRTPQMQDVSR 288
Query: 1031 PSAQPLQSHGSQAPPVHPFTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1210
+ QP Q +Q F Y
Sbjct: 289 VAPQPAQPQVNQTLQGQQFPQY---QQQWPQQLPLQVQPPQQTQPQIKPPSTTAYTPYQP 345
Query: 1211 XXXXXXXXXXETYPGNLSIQVPSSGIPQPGAGRSEAVNYGYGGINRATVQQQPSQHNMQR 1390
ET P +L +QV SG+PQ A R++ + YGYG R V QQP Q ++Q+
Sbjct: 346 PCQPTNPSPQETLPNSLPMQVSYSGVPQSLASRADTMPYGYGA-GRTAVPQQPRQPSLQQ 404
Query: 1391 PQQHSFGSAVGDNIYPVSGSLSARTPREGYMVYNGEGGSTSH-PVPTHFPQGGYPPSISS 1567
+ +FG D Y +G + P YMVY+GEGG T H P +HFPQGGYPP ++
Sbjct: 405 -IKGTFGGQHSD-AYATAGPHPGQPPVSAYMVYDGEGGRTHHPPQQSHFPQGGYPPQPAA 462
Query: 1568 VQNPPPVRQTSPSPMMRNNNPYNELIEKAVSMGYGRDFVVHVINTMAMSGQPMDFNTLLD 1747
P R +SPS R N+PY++LIEK VSMG+ D VI M SG+P+DFN +LD
Sbjct: 463 GTGMLP-RHSSPSHFFR-NHPYSDLIEKLVSMGFRGDHAASVIQRMEESGEPVDFNAVLD 520
Query: 1748 RLNM 1759
RLN+
Sbjct: 521 RLNV 524