BLASTX nr result

ID: Coptis25_contig00001882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001882
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320229.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
gb|ABK93089.1| unknown [Populus trichocarpa]                           74   1e-11
gb|ABK93249.1| unknown [Populus trichocarpa] gi|118487256|gb|ABK...    74   1e-11
gb|ABK93793.1| unknown [Populus trichocarpa]                           74   1e-11
ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [R...    74   1e-11

>ref|XP_002320229.1| predicted protein [Populus trichocarpa] gi|222861002|gb|EEE98544.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = -1

Query: 219 VTADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 100
           +TA+KIA LVKAANVQ+E+YWPGLFAKL EKRNIEDLIMN
Sbjct: 22  ITAEKIATLVKAANVQIESYWPGLFAKLAEKRNIEDLIMN 61


>gb|ABK93089.1| unknown [Populus trichocarpa]
          Length = 110

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = -1

Query: 219 VTADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 100
           +TA+KIA LVKAANVQ+E+YWPGLFAKL EKRNIEDLIMN
Sbjct: 22  ITAEKIATLVKAANVQIESYWPGLFAKLAEKRNIEDLIMN 61


>gb|ABK93249.1| unknown [Populus trichocarpa] gi|118487256|gb|ABK95456.1| unknown
           [Populus trichocarpa]
          Length = 109

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = -1

Query: 219 VTADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 100
           +TA+KIA LVKAANVQ+E+YWPGLFAKL EKRNIEDLIMN
Sbjct: 22  ITAEKIATLVKAANVQIESYWPGLFAKLAEKRNIEDLIMN 61


>gb|ABK93793.1| unknown [Populus trichocarpa]
          Length = 110

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = -1

Query: 219 VTADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 100
           +TA+KIA LVKAANVQ+E+YWPGLFAKL EKRNIEDLIMN
Sbjct: 22  ITAEKIATLVKAANVQIESYWPGLFAKLAEKRNIEDLIMN 61


>ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223545551|gb|EEF47055.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 113

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -1

Query: 222 PVTADKIAALVKAANVQVEAYWPGLFAKLVEKRNIEDLIMN 100
           P+TA+KIA LVKAANVQ+E+YWP LFAKL EKRNIEDL+MN
Sbjct: 21  PITAEKIAQLVKAANVQIESYWPSLFAKLAEKRNIEDLVMN 61


Top