BLASTX nr result
ID: Coptis25_contig00001880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001880
(1123 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA64408.1| shaggy-like kinase dzeta [Arabidopsis thaliana] ... 77 6e-12
ref|XP_002453590.1| hypothetical protein SORBIDRAFT_04g008580 [S... 76 1e-11
ref|NP_001149983.1| shaggy-related protein kinase eta [Zea mays]... 76 1e-11
gb|ACG33869.1| shaggy-related protein kinase eta [Zea mays] 76 1e-11
ref|NP_001130511.1| uncharacterized protein LOC100191610 [Zea ma... 76 1e-11
>emb|CAA64408.1| shaggy-like kinase dzeta [Arabidopsis thaliana]
gi|1669653|emb|CAA70483.1| serine/threonine kinase
[Arabidopsis thaliana]
Length = 412
Score = 77.4 bits (189), Expect = 6e-12
Identities = 57/126 (45%), Positives = 65/126 (51%), Gaps = 31/126 (24%)
Frame = -2
Query: 1122 KVLQDR-YKNRELQLMCSMDHPNVVSLKHCF*SEFLITTRT*I------RGCHSSM*NSI 964
KVLQDR YKNRELQLM MDHPNVVSLKHCF F TTR + ++ +
Sbjct: 102 KVLQDRRYKNRELQLMRLMDHPNVVSLKHCF---FSTTTRDELFLNLVMEYVPETLYRVL 158
Query: 963 --HTKSLDG*HIFTLYL----------------------VKPQNLLVDTHTHDVKLCDFG 856
+T S IF + L +KPQNLLVD HTH KLCDFG
Sbjct: 159 KHYTSSNQRMPIFYVKLYTYQIFRGLAYIHTAPGVCHRDIKPQNLLVDPHTHQCKLCDFG 218
Query: 855 STKIQV 838
S K+ V
Sbjct: 219 SAKVLV 224
>ref|XP_002453590.1| hypothetical protein SORBIDRAFT_04g008580 [Sorghum bicolor]
gi|241933421|gb|EES06566.1| hypothetical protein
SORBIDRAFT_04g008580 [Sorghum bicolor]
Length = 417
Score = 76.3 bits (186), Expect = 1e-11
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = -1
Query: 1033 LIRVLNHYSNMNQRMPLLYVKLYTYQIFRWLAYIHTVPG 917
L RVL HYSNMNQRMPL+YVKLYTYQIFR LAYIHTVPG
Sbjct: 159 LYRVLKHYSNMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 197
Score = 72.0 bits (175), Expect = 3e-10
Identities = 58/124 (46%), Positives = 68/124 (54%), Gaps = 29/124 (23%)
Frame = -2
Query: 1122 KVLQD-RYKNRELQLMCSMDHPNVVSLKHCF*S-------------EFLITTRT*IRGCH 985
KVLQD RYKNRELQ+M SMDH NVVSLKHCF S EF+ + + +
Sbjct: 107 KVLQDKRYKNRELQIMRSMDHCNVVSLKHCFFSTTSRDELFLNLVMEFVPESLYRVLKHY 166
Query: 984 SSM*NS---IHTKSLDG*HIF--TLYL----------VKPQNLLVDTHTHDVKLCDFGST 850
S+M I+ K L IF Y+ VKPQNLLVD TH VK+CDFGS
Sbjct: 167 SNMNQRMPLIYVK-LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKICDFGSA 225
Query: 849 KIQV 838
K+ V
Sbjct: 226 KMLV 229
>ref|NP_001149983.1| shaggy-related protein kinase eta [Zea mays]
gi|195635873|gb|ACG37405.1| shaggy-related protein kinase
eta [Zea mays]
Length = 409
Score = 76.3 bits (186), Expect = 1e-11
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = -1
Query: 1033 LIRVLNHYSNMNQRMPLLYVKLYTYQIFRWLAYIHTVPG 917
L RVL HYSNMNQRMPL+YVKLYTYQIFR LAYIHTVPG
Sbjct: 151 LYRVLKHYSNMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 189
Score = 70.5 bits (171), Expect = 7e-10
Identities = 57/124 (45%), Positives = 67/124 (54%), Gaps = 29/124 (23%)
Frame = -2
Query: 1122 KVLQD-RYKNRELQLMCSMDHPNVVSLKHCF*S-------------EFLITTRT*IRGCH 985
KVLQD RYKNRELQ+M SMDH N VSLKHCF S EF+ + + +
Sbjct: 99 KVLQDKRYKNRELQIMRSMDHCNAVSLKHCFFSTTSRDELFLNLVMEFVPESLYRVLKHY 158
Query: 984 SSM*NS---IHTKSLDG*HIF--TLYL----------VKPQNLLVDTHTHDVKLCDFGST 850
S+M I+ K L IF Y+ VKPQNLLVD TH VK+CDFGS
Sbjct: 159 SNMNQRMPLIYVK-LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKICDFGSA 217
Query: 849 KIQV 838
K+ V
Sbjct: 218 KMLV 221
>gb|ACG33869.1| shaggy-related protein kinase eta [Zea mays]
Length = 412
Score = 76.3 bits (186), Expect = 1e-11
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = -1
Query: 1033 LIRVLNHYSNMNQRMPLLYVKLYTYQIFRWLAYIHTVPG 917
L RVL HYSNMNQRMPL+YVKLYTYQIFR LAYIHTVPG
Sbjct: 154 LYRVLKHYSNMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 192
Score = 72.4 bits (176), Expect = 2e-10
Identities = 58/124 (46%), Positives = 68/124 (54%), Gaps = 29/124 (23%)
Frame = -2
Query: 1122 KVLQD-RYKNRELQLMCSMDHPNVVSLKHCF*S-------------EFLITTRT*IRGCH 985
KVLQD RYKNRELQ+M SMDH NVVSLKHCF S EF+ + + +
Sbjct: 102 KVLQDKRYKNRELQIMRSMDHCNVVSLKHCFFSTTSRDELFLNLVMEFVPESLYRVLKHY 161
Query: 984 SSM*NS---IHTKSLDG*HIF--TLYL----------VKPQNLLVDTHTHDVKLCDFGST 850
S+M I+ K L IF Y+ VKPQNLLVD TH VK+CDFGS
Sbjct: 162 SNMNQRMPLIYVK-LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPPTHQVKICDFGSA 220
Query: 849 KIQV 838
K+ V
Sbjct: 221 KMLV 224
>ref|NP_001130511.1| uncharacterized protein LOC100191610 [Zea mays]
gi|194689346|gb|ACF78757.1| unknown [Zea mays]
gi|194700586|gb|ACF84377.1| unknown [Zea mays]
gi|194707456|gb|ACF87812.1| unknown [Zea mays]
gi|195634801|gb|ACG36869.1| shaggy-related protein kinase
eta [Zea mays] gi|413926059|gb|AFW65991.1| putative
glycogen synthase kinase family protein [Zea mays]
Length = 412
Score = 76.3 bits (186), Expect = 1e-11
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = -1
Query: 1033 LIRVLNHYSNMNQRMPLLYVKLYTYQIFRWLAYIHTVPG 917
L RVL HYSNMNQRMPL+YVKLYTYQIFR LAYIHTVPG
Sbjct: 154 LYRVLKHYSNMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 192
Score = 72.0 bits (175), Expect = 3e-10
Identities = 58/124 (46%), Positives = 68/124 (54%), Gaps = 29/124 (23%)
Frame = -2
Query: 1122 KVLQD-RYKNRELQLMCSMDHPNVVSLKHCF*S-------------EFLITTRT*IRGCH 985
KVLQD RYKNRELQ+M SMDH NVVSLKHCF S EF+ + + +
Sbjct: 102 KVLQDKRYKNRELQIMRSMDHCNVVSLKHCFFSTTSRDELFLNLVMEFVPESLYRVLKHY 161
Query: 984 SSM*NS---IHTKSLDG*HIF--TLYL----------VKPQNLLVDTHTHDVKLCDFGST 850
S+M I+ K L IF Y+ VKPQNLLVD TH VK+CDFGS
Sbjct: 162 SNMNQRMPLIYVK-LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKICDFGSA 220
Query: 849 KIQV 838
K+ V
Sbjct: 221 KMLV 224