BLASTX nr result

ID: Coptis25_contig00001879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001879
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ55297.1| DNA-binding family protein [Coffea arabica]             81   1e-30
gb|ADY38786.1| DNA-binding protein [Coffea arabica]                    81   1e-30
gb|ABZ89179.1| hypothetical protein 46C02.5 [Coffea canephora]         81   1e-30
ref|XP_002270792.1| PREDICTED: uncharacterized protein LOC100261...    82   2e-29
emb|CAN72947.1| hypothetical protein VITISV_034305 [Vitis vinifera]    82   2e-29

>gb|ADZ55297.1| DNA-binding family protein [Coffea arabica]
          Length = 351

 Score = 80.9 bits (198), Expect(2) = 1e-30
 Identities = 41/58 (70%), Positives = 45/58 (77%)
 Frame = +1

Query: 1   ITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQPAMLGGNVTYEGCFEIFS 174
           ITVA  EDV Q IM F+QQ K  +CILSASGSISN SLRQPA  GGN+TYEG F+I S
Sbjct: 156 ITVAAGEDVGQKIMLFMQQSKREICILSASGSISNASLRQPATSGGNITYEGRFDILS 213



 Score = 77.4 bits (189), Expect(2) = 1e-30
 Identities = 41/85 (48%), Positives = 51/85 (60%)
 Frame = +3

Query: 279 FEIFSLSGSFLHNEVGGASSRTGGLSVCLSSTDXXXXXXXXXXPLTAAGPVQIVAASFSF 458
           F+I SL GS++  E+GG   RTGGLSVCLSSTD          PLTAAGP+QI+  +F  
Sbjct: 209 FDILSLCGSYVRTELGG---RTGGLSVCLSSTDGQIIGGGVGGPLTAAGPIQIIVGTFVI 265

Query: 459 DTTKNTNADEKLEASLNKSPSQVAG 533
           D  K+     K + S  KSPS + G
Sbjct: 266 DPKKDITGGLKGDTSAGKSPSPIGG 290


>gb|ADY38786.1| DNA-binding protein [Coffea arabica]
          Length = 351

 Score = 80.9 bits (198), Expect(2) = 1e-30
 Identities = 41/58 (70%), Positives = 45/58 (77%)
 Frame = +1

Query: 1   ITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQPAMLGGNVTYEGCFEIFS 174
           ITVA  EDV Q IM F+QQ K  +CILSASGSISN SLRQPA  GGN+TYEG F+I S
Sbjct: 156 ITVAAGEDVGQKIMLFMQQSKREICILSASGSISNASLRQPATSGGNITYEGRFDILS 213



 Score = 77.4 bits (189), Expect(2) = 1e-30
 Identities = 41/85 (48%), Positives = 51/85 (60%)
 Frame = +3

Query: 279 FEIFSLSGSFLHNEVGGASSRTGGLSVCLSSTDXXXXXXXXXXPLTAAGPVQIVAASFSF 458
           F+I SL GS++  E+GG   RTGGLSVCLSSTD          PLTAAGP+QI+  +F  
Sbjct: 209 FDILSLCGSYVRTELGG---RTGGLSVCLSSTDGQIIGGGVGGPLTAAGPIQIIVGTFVM 265

Query: 459 DTTKNTNADEKLEASLNKSPSQVAG 533
           D  K+     K + S  KSPS + G
Sbjct: 266 DPKKDITGGLKGDTSAGKSPSPIGG 290


>gb|ABZ89179.1| hypothetical protein 46C02.5 [Coffea canephora]
          Length = 351

 Score = 80.9 bits (198), Expect(2) = 1e-30
 Identities = 41/58 (70%), Positives = 45/58 (77%)
 Frame = +1

Query: 1   ITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQPAMLGGNVTYEGCFEIFS 174
           ITVA  EDV Q IM F+QQ K  +CILSASGSISN SLRQPA  GGN+TYEG F+I S
Sbjct: 156 ITVAAGEDVGQKIMLFMQQSKREICILSASGSISNASLRQPATSGGNITYEGRFDILS 213



 Score = 77.4 bits (189), Expect(2) = 1e-30
 Identities = 41/85 (48%), Positives = 51/85 (60%)
 Frame = +3

Query: 279 FEIFSLSGSFLHNEVGGASSRTGGLSVCLSSTDXXXXXXXXXXPLTAAGPVQIVAASFSF 458
           F+I SL GS++  E+GG   RTGGLSVCLSSTD          PLTAAGP+QI+  +F  
Sbjct: 209 FDILSLCGSYVRTELGG---RTGGLSVCLSSTDGQIIGGGVGGPLTAAGPIQIIVGTFVI 265

Query: 459 DTTKNTNADEKLEASLNKSPSQVAG 533
           D  K+     K + S  KSPS + G
Sbjct: 266 DPKKDITGGLKGDTSAGKSPSPIGG 290


>ref|XP_002270792.1| PREDICTED: uncharacterized protein LOC100261576 [Vitis vinifera]
           gi|296087886|emb|CBI35169.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score = 81.6 bits (200), Expect(2) = 2e-29
 Identities = 42/58 (72%), Positives = 46/58 (79%)
 Frame = +1

Query: 1   ITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQPAMLGGNVTYEGCFEIFS 174
           ITVA+ EDVAQ IM F+QQ K  +CI+SASGSISN SLRQPA  GGNV YEG FEI S
Sbjct: 137 ITVASGEDVAQKIMFFMQQSKREICIMSASGSISNASLRQPATSGGNVAYEGRFEILS 194



 Score = 72.4 bits (176), Expect(2) = 2e-29
 Identities = 41/85 (48%), Positives = 53/85 (62%)
 Frame = +3

Query: 279 FEIFSLSGSFLHNEVGGASSRTGGLSVCLSSTDXXXXXXXXXXPLTAAGPVQIVAASFSF 458
           FEI SL+GS++  E+GG   RTGGLSVCLS+TD          PL AAGPVQ++  +F  
Sbjct: 190 FEILSLTGSYVRTEIGG---RTGGLSVCLSNTDGEIIGGGVGGPLKAAGPVQVIVGTFLV 246

Query: 459 DTTKNTNADEKLEASLNKSPSQVAG 533
           D+ K+T+   K +AS  K  S V G
Sbjct: 247 DSKKDTSTGLKADAS-PKFTSPVGG 270


>emb|CAN72947.1| hypothetical protein VITISV_034305 [Vitis vinifera]
          Length = 285

 Score = 81.6 bits (200), Expect(2) = 2e-29
 Identities = 42/58 (72%), Positives = 46/58 (79%)
 Frame = +1

Query: 1   ITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQPAMLGGNVTYEGCFEIFS 174
           ITVA+ EDVAQ IM F+QQ K  +CI+SASGSISN SLRQPA  GGNV YEG FEI S
Sbjct: 92  ITVASGEDVAQKIMFFMQQSKREICIMSASGSISNASLRQPATSGGNVAYEGRFEILS 149



 Score = 72.4 bits (176), Expect(2) = 2e-29
 Identities = 41/85 (48%), Positives = 53/85 (62%)
 Frame = +3

Query: 279 FEIFSLSGSFLHNEVGGASSRTGGLSVCLSSTDXXXXXXXXXXPLTAAGPVQIVAASFSF 458
           FEI SL+GS++  E+GG   RTGGLSVCLS+TD          PL AAGPVQ++  +F  
Sbjct: 145 FEILSLTGSYVRTEIGG---RTGGLSVCLSNTDGEIIGGGVGGPLKAAGPVQVIVGTFLV 201

Query: 459 DTTKNTNADEKLEASLNKSPSQVAG 533
           D+ K+T+   K +AS  K  S V G
Sbjct: 202 DSKKDTSTGLKADAS-PKFTSPVGG 225


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