BLASTX nr result

ID: Coptis25_contig00001876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001876
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|2...   184   4e-44
ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|2...   180   6e-43
ref|XP_003520299.1| PREDICTED: uncharacterized protein LOC100798...   178   3e-42
ref|XP_002521549.1| conserved hypothetical protein [Ricinus comm...   177   5e-42
ref|XP_003612063.1| hypothetical protein MTR_5g020870 [Medicago ...   177   5e-42

>ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|222836876|gb|EEE75269.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  184 bits (467), Expect = 4e-44
 Identities = 113/259 (43%), Positives = 145/259 (55%), Gaps = 3/259 (1%)
 Frame = -3

Query: 1020 GDYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSLKFVDAIEELSSECSP 841
            GD +DFFDPQ                 D +  + +   + +    +F DA EELSSE  P
Sbjct: 199  GDVDDFFDPQDSMSYTSNTDVE-----DTTAAECSMKLTAAIPVGEFYDAWEELSSESGP 253

Query: 840  HVLHRDVT--AELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTLPTPST 667
            H         AELR++R SLLMEI+ RKQAEEA   +Q QW+R+ Q L+L GL+LP    
Sbjct: 254  HPSPSPHLSGAELREMRLSLLMEIEKRKQAEEALTNMQNQWQRIRQELALVGLSLPAFPV 313

Query: 666  NATE-DEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQ 490
            +  E D+ S+++P EE+CQQI L R VS S+GR  AKAEAEIELE+++  KNFEI RL  
Sbjct: 314  DVPENDQPSDSNPAEEICQQIYLARFVSESIGRGIAKAEAEIELEAQVEEKNFEIARLCD 373

Query: 489  RLHYYEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWSFIPTD 310
            RLHYYE VN EMS RNQE +E+            +             + ALAWS++P  
Sbjct: 374  RLHYYEAVNREMSHRNQEVIEMARRNRQARKRRRKWIWGSIAAAITLGTTALAWSYLPAM 433

Query: 309  GVSFPTDTSHAPEVEGAAN 253
              S     SHAPE +  AN
Sbjct: 434  RGSSSASDSHAPEHDDTAN 452


>ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|222853159|gb|EEE90706.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  180 bits (457), Expect = 6e-43
 Identities = 115/266 (43%), Positives = 146/266 (54%), Gaps = 10/266 (3%)
 Frame = -3

Query: 1020 GDYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSL-----KFVDAIEELS 856
            GD +DFFDPQ                 +  VED     S    +      +F DA EELS
Sbjct: 160  GDSDDFFDPQDSMSYTS----------NTDVEDTTAVESSMKLTAALPVGEFYDAWEELS 209

Query: 855  SEC----SPHVLHRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGL 688
            SE     SP   H    AELR++R SLLMEI+ RKQAEEA D +Q+QW+R+ Q L+L GL
Sbjct: 210  SESGQQPSPSPHHNG--AELREMRLSLLMEIEKRKQAEEALDNMQSQWQRIRQELALVGL 267

Query: 687  TLPTPSTNATE-DEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNF 511
            +LP    +  E D+ S+ +PVEE+CQQI L R VS S+GR  AKAEAEIE+E+++ +KNF
Sbjct: 268  SLPACPVDVPESDQPSDVNPVEEICQQIYLARFVSESIGRGIAKAEAEIEMEAQVEAKNF 327

Query: 510  EITRLSQRLHYYEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALA 331
            EI RL  RLHYYE VN E+S  NQE +E             +                LA
Sbjct: 328  EIARLLDRLHYYEAVNRELSQWNQEVIETARRNRQIRKRRQKWVWGSIAAAITLGMTTLA 387

Query: 330  WSFIPTDGVSFPTDTSHAPEVEGAAN 253
            WS++P    S  +  SHAPE +  AN
Sbjct: 388  WSYLPAMSGSSSSSDSHAPEHDDTAN 413


>ref|XP_003520299.1| PREDICTED: uncharacterized protein LOC100798468 [Glycine max]
          Length = 438

 Score =  178 bits (451), Expect = 3e-42
 Identities = 107/256 (41%), Positives = 143/256 (55%)
 Frame = -3

Query: 1020 GDYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSLKFVDAIEELSSECSP 841
            G+ EDFFDP              +   D        AG  S    +F DA EELSS+   
Sbjct: 192  GESEDFFDPHDSMSLKSCTDAEDNTGAD-------QAGKFSAAGGEFFDAWEELSSDGGT 244

Query: 840  HVLHRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTLPTPSTNA 661
               HRD+ AELR+IR SLLMEI+ RKQ EE+ + +Q+QWERL QRLSL G+ LP+  T  
Sbjct: 245  QNSHRDIEAELREIRLSLLMEIEKRKQVEESLNSMQSQWERLRQRLSLMGIALPSDLT-- 302

Query: 660  TEDEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLH 481
             E  +  +DP+E++CQQ+ + R +S ++GR  A+AEAEIE+E+++ SKNFEI RL +RLH
Sbjct: 303  AEGGQLSSDPMEDVCQQLYIARFISNTIGRGIARAEAEIEMEAQLESKNFEIARLLERLH 362

Query: 480  YYEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWSFIPTDGVS 301
             YE +N EMS RNQE VE+            R             + A+AWS++P    S
Sbjct: 363  CYETMNREMSQRNQEAVEMARRERQRRSRRQRWIWGSITTAIAVGTAAIAWSYLPVGRGS 422

Query: 300  FPTDTSHAPEVEGAAN 253
                     E + AAN
Sbjct: 423  TSAVHDQVSEHDDAAN 438


>ref|XP_002521549.1| conserved hypothetical protein [Ricinus communis]
            gi|223539227|gb|EEF40820.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 475

 Score =  177 bits (449), Expect = 5e-42
 Identities = 112/258 (43%), Positives = 142/258 (55%), Gaps = 8/258 (3%)
 Frame = -3

Query: 1020 GDYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSL-------KFVDAIEE 862
            G+ EDFFDPQ                +  + +  +N G ES   L       +F DA EE
Sbjct: 224  GESEDFFDPQESMS------------YTSNTDGEDNCGVESSIKLAATTPVGEFYDAWEE 271

Query: 861  LSSECSPHVLHRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTL 682
            LSSE       RD+ AELR++R SLL+EI+ RKQAEE  +  Q  W+R+ ++L+L GLTL
Sbjct: 272  LSSESGQQSSFRDIEAELREMRLSLLVEIEKRKQAEETLNNAQNHWQRMREQLALVGLTL 331

Query: 681  PTPSTNATEDEKS-EADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEI 505
            P       E E S + DP EELCQQ+ L R VS S+GR  AKAEAE+E E++I +KNFEI
Sbjct: 332  PAFPFADPEGELSLDTDPAEELCQQVYLARFVSDSIGRGMAKAEAEMEKEAQIEAKNFEI 391

Query: 504  TRLSQRLHYYEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWS 325
             RL  RLHYYE +N EMS RNQE VE+            R             + ALAWS
Sbjct: 392  ARLVDRLHYYEAMNREMSQRNQEAVEMARRNRQVRKGRQRWVWGSIATVVTLGTAALAWS 451

Query: 324  FIPTDGVSFPTDTSHAPE 271
            ++P    S  +  S APE
Sbjct: 452  YLPATKGSSSSSDSLAPE 469


>ref|XP_003612063.1| hypothetical protein MTR_5g020870 [Medicago truncatula]
            gi|355513398|gb|AES95021.1| hypothetical protein
            MTR_5g020870 [Medicago truncatula]
            gi|388497508|gb|AFK36820.1| unknown [Medicago truncatula]
          Length = 439

 Score =  177 bits (449), Expect = 5e-42
 Identities = 100/254 (39%), Positives = 143/254 (56%)
 Frame = -3

Query: 1017 DYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSLKFVDAIEELSSECSPH 838
            D EDFFDPQ             +   DLS++  +  G       +F DA EELSS+ +  
Sbjct: 192  DIEDFFDPQDSMSFTSNTDVEENAGTDLSMKFSSPGG-------EFYDAWEELSSDAATQ 244

Query: 837  VLHRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTLPTPSTNAT 658
                DV AELR++R SLLMEI+ RKQAEE+ + ++ QW+ + Q L L G+ LP   T   
Sbjct: 245  NSASDVEAELREMRLSLLMEIEKRKQAEESLNNMRNQWQSIRQGLYLAGIILPADLTAVA 304

Query: 657  EDEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLHY 478
            E E+  +DPVE+LCQQ+ + R +S ++GR T + E E+E+E+++ SKNFEI RL +RLH 
Sbjct: 305  EGEQLNSDPVEDLCQQLYVARFISNTIGRATVRTEVEMEMEAQLESKNFEIARLMERLHC 364

Query: 477  YEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWSFIPTDGVSF 298
            YE +N EMS RNQE VE+            +             + A+AWS++P  G S+
Sbjct: 365  YETMNHEMSQRNQEAVEMARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAGGESY 424

Query: 297  PTDTSHAPEVEGAA 256
              +    P+ + AA
Sbjct: 425  SAEDHPVPKHDDAA 438


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