BLASTX nr result
ID: Coptis25_contig00001873
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001873
(1353 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|2... 431 e-118
ref|XP_003529765.1| PREDICTED: F-box/kelch-repeat protein At1g51... 421 e-115
ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|2... 421 e-115
ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51... 420 e-115
emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera] 420 e-115
>ref|XP_002315377.1| predicted protein [Populus trichocarpa] gi|222864417|gb|EEF01548.1|
predicted protein [Populus trichocarpa]
Length = 469
Score = 431 bits (1109), Expect = e-118
Identities = 203/321 (63%), Positives = 242/321 (75%)
Frame = +1
Query: 1 GRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQND 180
GR LDD WVAYIGN+F+ + +WQK+NSG P+GRFGH+C V+G+ LVLFGGIND GIRQND
Sbjct: 142 GRDLDDTWVAYIGNDFQRMLKWQKVNSGIPNGRFGHACIVIGDYLVLFGGINDRGIRQND 201
Query: 181 TWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLNDT 360
TW+G V+ E GI LSW LL V S+APPPRGAHA CC++ M+IHGGIGL G R+ DT
Sbjct: 202 TWVGKVVLSENLGITLSWRLLDVRSIAPPPRGAHAACCIDKSTMVIHGGIGLYGLRMGDT 261
Query: 361 WLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLLDI 540
W+ +LSE S TW +++T+ SPPARSGHTLTCI T +VLFGGRG GY+VL+DVWLL +
Sbjct: 262 WILELSENFCSGTWRELVTHPSPPARSGHTLTCIEGTGIVLFGGRGSGYDVLHDVWLLQV 321
Query: 541 REEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLDVN 720
E +WIQ+LYNL IP GV PRVGHSAT EDS R RK+DFWVLDV+
Sbjct: 322 SEVELKWIQILYNLQDIPAGVSLPRVGHSATLILGGRLLIYGGEDSQRHRKDDFWVLDVS 381
Query: 721 AIPSERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVDGIL 900
IPS + +S L + MWK LKAKG++P RSFHRACADHSGC +YVFGGMVDG+L
Sbjct: 382 KIPSNKAQSPLNSRGLQANNMWKMLKAKGYKPYRRSFHRACADHSGCRLYVFGGMVDGLL 441
Query: 901 RPGEVIGLRFDGELFLVELGL 963
+P E GLRFDGELFLV+L L
Sbjct: 442 QPAEAYGLRFDGELFLVKLEL 462
>ref|XP_003529765.1| PREDICTED: F-box/kelch-repeat protein At1g51550-like [Glycine max]
Length = 498
Score = 421 bits (1081), Expect = e-115
Identities = 195/319 (61%), Positives = 243/319 (76%), Gaps = 1/319 (0%)
Frame = +1
Query: 1 GRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQND 180
GRHLDD WVAYIGN+FR + +WQ ++SG PSGRFGH+C +G+ LVLFGGIND G R+ND
Sbjct: 139 GRHLDDTWVAYIGNDFRRMLKWQTVHSGIPSGRFGHTCVEMGDYLVLFGGINDRGNRKND 198
Query: 181 TWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLNDT 360
TWLGHV+ +E G+ SW +L VG+VAPP RGAHA CC+++KRMIIHGGIGL+G RL DT
Sbjct: 199 TWLGHVMFNENNGVTFSWKMLDVGNVAPPSRGAHAACCIDEKRMIIHGGIGLNGLRLGDT 258
Query: 361 WLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLLDI 540
W+ ++S+ TW +I+ + SPP RSGHTLTCIG +R +LFGGRG+GYEVL+DVWLLD
Sbjct: 259 WVLEMSDSHCFGTWHEIVAHPSPPPRSGHTLTCIGRSRTILFGGRGLGYEVLDDVWLLDT 318
Query: 541 REEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLDVN 720
+ Y W+Q++Y+L SIP GV PRVGH+AT EDSYR+RK+DFWVLD++
Sbjct: 319 YQGYQRWVQIVYDLQSIPAGVSLPRVGHTATLVLGGRLLIYGGEDSYRQRKDDFWVLDIS 378
Query: 721 AIPSERMRSD-TVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVDGI 897
AIP + TV ++ + +MWKR K+ GH + RSFHRACAD SG YVYVFGGMVDG
Sbjct: 379 AIPYPCITQQITVSSKKVLTRMWKRWKSSGHAANSRSFHRACADRSGRYVYVFGGMVDGF 438
Query: 898 LRPGEVIGLRFDGELFLVE 954
L+P E GLRFDGELFLV+
Sbjct: 439 LQPAEPSGLRFDGELFLVD 457
>ref|XP_002311905.1| predicted protein [Populus trichocarpa] gi|222851725|gb|EEE89272.1|
predicted protein [Populus trichocarpa]
Length = 475
Score = 421 bits (1081), Expect = e-115
Identities = 199/322 (61%), Positives = 240/322 (74%), Gaps = 1/322 (0%)
Frame = +1
Query: 1 GRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQND 180
GR LDD WVAYIG +F+ + +WQK+ SG PSGRFGH+CAV+GE LVLFGGIND G+RQND
Sbjct: 147 GRDLDDTWVAYIGKDFQRMLKWQKVTSGIPSGRFGHTCAVIGENLVLFGGINDRGMRQND 206
Query: 181 TWLGHVLRDEIFGIE-LSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLND 357
TW+G V+ E GI LSW LL V SVAPPPRGAHA CC++ + M+IHGGIGL G RL D
Sbjct: 207 TWVGQVVLGENLGITTLSWRLLDVSSVAPPPRGAHAACCIDKRTMVIHGGIGLYGLRLGD 266
Query: 358 TWLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLLD 537
TW+ +LSE S TW +++ + SPP RSGHTLTCI T VLFGGRG+GY+VL+DVWLL
Sbjct: 267 TWILELSENFCSGTWIELVAHPSPPPRSGHTLTCIEGTGTVLFGGRGLGYDVLHDVWLLQ 326
Query: 538 IREEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLDV 717
E+ +W+Q+LYNL IP GV PRVGHSAT EDS R RK DFWVLDV
Sbjct: 327 ASEDQLKWVQMLYNLQDIPEGVSLPRVGHSATLILGGRLLIYGGEDSQRHRKGDFWVLDV 386
Query: 718 NAIPSERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVDGI 897
+ IPS + +S ++++ L MW+RLKAKG++P+CRSFHRACADHSG +YVFGGMVD +
Sbjct: 387 SKIPSIKEQSTPLNSRGLQANMWRRLKAKGYKPNCRSFHRACADHSGRRLYVFGGMVDSL 446
Query: 898 LRPGEVIGLRFDGELFLVELGL 963
L P E LRFDGELFLV+ L
Sbjct: 447 LHPAEASELRFDGELFLVKFEL 468
>ref|XP_002264976.1| PREDICTED: F-box/kelch-repeat protein At1g51550 [Vitis vinifera]
gi|297735772|emb|CBI18459.3| unnamed protein product
[Vitis vinifera]
Length = 473
Score = 420 bits (1080), Expect = e-115
Identities = 194/322 (60%), Positives = 239/322 (74%), Gaps = 1/322 (0%)
Frame = +1
Query: 1 GRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQND 180
GRH+DD WVAYIGN+FR + RW+KI SG PSGRFGH+C V+G LVLFGGIND GIR ND
Sbjct: 150 GRHIDDTWVAYIGNDFRRMLRWEKITSGIPSGRFGHTCVVIGNHLVLFGGINDDGIRHND 209
Query: 181 TWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLNDT 360
TW+G V +E G +SW LL VGSVAPPPRGAHAGCC+ + RM+IHGGIGL G RL DT
Sbjct: 210 TWVGQVALNETLGFTVSWRLLDVGSVAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRLGDT 269
Query: 361 WLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLLDI 540
W+ DLSE L TW +++T+ SPPARSGHTLTCIG +R VLFGGRG+ Y VLND+WL +
Sbjct: 270 WMLDLSENLCFGTWHEVVTHPSPPARSGHTLTCIGGSRTVLFGGRGLSYNVLNDLWLFEF 329
Query: 541 REEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLDVN 720
E Y++W+Q+LY L ++P G+ PRVGHSAT EDS R RK+DFWVLD
Sbjct: 330 SEVYSKWVQILYELKNVPGGISLPRVGHSATLILGGRVLIYGGEDSQRHRKDDFWVLDTG 389
Query: 721 AIPS-ERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVDGI 897
AI S + ++++ L +WKRL A+G++P+CRSFH AC D SG +++VFGGMVDG+
Sbjct: 390 AITSVNPINPIPLNSRGLLVNIWKRLNAEGYKPECRSFHGACTDRSGRFLFVFGGMVDGL 449
Query: 898 LRPGEVIGLRFDGELFLVELGL 963
+RP E G+RFD ELFL EL L
Sbjct: 450 IRPAEPAGMRFDAELFLAELVL 471
>emb|CAN68359.1| hypothetical protein VITISV_029196 [Vitis vinifera]
Length = 473
Score = 420 bits (1080), Expect = e-115
Identities = 194/322 (60%), Positives = 239/322 (74%), Gaps = 1/322 (0%)
Frame = +1
Query: 1 GRHLDDAWVAYIGNEFRMVPRWQKINSGTPSGRFGHSCAVVGETLVLFGGINDHGIRQND 180
GRH+DD WVAYIGN+FR + RW+KI SG PSGRFGH+C V+G LVLFGGIND GIR ND
Sbjct: 150 GRHIDDTWVAYIGNDFRRMLRWEKITSGIPSGRFGHTCVVIGNHLVLFGGINDDGIRHND 209
Query: 181 TWLGHVLRDEIFGIELSWMLLHVGSVAPPPRGAHAGCCVNDKRMIIHGGIGLDGHRLNDT 360
TW+G V +E G +SW LL VGSVAPPPRGAHAGCC+ + RM+IHGGIGL G RL DT
Sbjct: 210 TWVGQVAPNETLGFTVSWRLLDVGSVAPPPRGAHAGCCIGNNRMVIHGGIGLYGLRLGDT 269
Query: 361 WLFDLSEGLESTTWSQIITYLSPPARSGHTLTCIGSTRMVLFGGRGVGYEVLNDVWLLDI 540
W+ DLSE L TW +++T+ SPPARSGHTLTCIG +R VLFGGRG+ Y VLND+WL +
Sbjct: 270 WMLDLSENLCFGTWHEVVTHPSPPARSGHTLTCIGGSRTVLFGGRGLSYNVLNDLWLFEF 329
Query: 541 REEYAEWIQLLYNLPSIPRGVPPPRVGHSATXXXXXXXXXXXXEDSYRRRKNDFWVLDVN 720
E Y++W+Q+LY L ++P G+ PRVGHSAT EDS R RK+DFWVLD
Sbjct: 330 SEVYSKWVQILYELKNVPGGISLPRVGHSATLILGGRVLIYGGEDSQRHRKDDFWVLDTG 389
Query: 721 AIPS-ERMRSDTVDTQLLSKKMWKRLKAKGHQPDCRSFHRACADHSGCYVYVFGGMVDGI 897
AI S + ++++ L +WKRL A+G++P+CRSFH AC D SG +++VFGGMVDG+
Sbjct: 390 AITSVNPINPIPLNSRGLLVNIWKRLNAEGYKPECRSFHGACTDRSGRFLFVFGGMVDGL 449
Query: 898 LRPGEVIGLRFDGELFLVELGL 963
+RP E G+RFD ELFL EL L
Sbjct: 450 IRPAEPAGMRFDAELFLAELVL 471