BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001871
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...   432   e-119
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...   429   e-118
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...   427   e-117
ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arab...   423   e-116
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...   421   e-115

>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
            gi|296090151|emb|CBI39970.3| unnamed protein product
            [Vitis vinifera]
          Length = 907

 Score =  432 bits (1110), Expect = e-119
 Identities = 217/246 (88%), Positives = 229/246 (93%), Gaps = 4/246 (1%)
 Frame = +3

Query: 12   GILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLKPIMLVFVTMVLLIRFTLSRR 179
            GILE +WD + D    GG+ SKL E YTFGG+S+SLEMLKPIMLVF+TM LL+RFTLSRR
Sbjct: 303  GILERVWDNVIDVFSDGGVFSKLNEIYTFGGISASLEMLKPIMLVFLTMALLVRFTLSRR 362

Query: 180  PKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRYLKNPELFDK 359
            PKNFRKWDIWQGIEF QSK QARVDGSTGV F DVAGI+EAV+ELQELV+YLKNPELFDK
Sbjct: 363  PKNFRKWDIWQGIEFSQSKAQARVDGSTGVKFSDVAGIEEAVEELQELVKYLKNPELFDK 422

Query: 360  MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKR 539
            MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKR
Sbjct: 423  MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKR 482

Query: 540  AKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQERETTLNQLLIELDGFDTGKGV 719
            AKVNKPSVIFIDEIDALATRRQG+ SEST+ LYNAATQERETTLNQLLIELDGFDTGKGV
Sbjct: 483  AKVNKPSVIFIDEIDALATRRQGIFSESTDHLYNAATQERETTLNQLLIELDGFDTGKGV 542

Query: 720  IFLGAT 737
            IFLGAT
Sbjct: 543  IFLGAT 548


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
            predicted protein [Populus trichocarpa]
          Length = 932

 Score =  429 bits (1103), Expect = e-118
 Identities = 215/249 (86%), Positives = 229/249 (91%), Gaps = 4/249 (1%)
 Frame = +3

Query: 3    LCFGILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLKPIMLVFVTMVLLIRFTL 170
            L F ILEG+WD + D    GG+ SK YEFYTFGGVS+S+EMLKPIMLV +TMVLL+RFTL
Sbjct: 324  LTFSILEGVWDYVVDIFSDGGLFSKFYEFYTFGGVSASIEMLKPIMLVLLTMVLLVRFTL 383

Query: 171  SRRPKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRYLKNPEL 350
            SRRPKNFRKWD+WQGI+F +SK +ARVDGSTGV F DVAGIDEAV+ELQELVRYLKNPEL
Sbjct: 384  SRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPEL 443

Query: 351  FDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDL 530
            FDKMGIKPPHGVLLEG PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDL
Sbjct: 444  FDKMGIKPPHGVLLEGAPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDL 503

Query: 531  FKRAKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQERETTLNQLLIELDGFDTG 710
            FKRAKVNKPSVIFIDEIDALATRRQG+  EST+ LYNAATQERETTLNQLLIELDGFDTG
Sbjct: 504  FKRAKVNKPSVIFIDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTG 563

Query: 711  KGVIFLGAT 737
            KGVIFL AT
Sbjct: 564  KGVIFLAAT 572


>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 925

 Score =  427 bits (1097), Expect = e-117
 Identities = 213/242 (88%), Positives = 227/242 (93%)
 Frame = +3

Query: 12   GILEGIWDKIYDGGISSKLYEFYTFGGVSSSLEMLKPIMLVFVTMVLLIRFTLSRRPKNF 191
            GILEGI+D   DGG+ SKL EFYTFGGVS+S+EMLKPI LV +TMVLL+RFTLSRRPKNF
Sbjct: 327  GILEGIFDVFSDGGVFSKLSEFYTFGGVSASIEMLKPITLVLLTMVLLVRFTLSRRPKNF 386

Query: 192  RKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRYLKNPELFDKMGIK 371
            RKWD+WQGI+F +SK +ARVDGSTGV F DVAGID+AV+ELQELVRYLKNPELFDKMGIK
Sbjct: 387  RKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDDAVEELQELVRYLKNPELFDKMGIK 446

Query: 372  PPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVN 551
            PPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVN
Sbjct: 447  PPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVN 506

Query: 552  KPSVIFIDEIDALATRRQGLSSESTNDLYNAATQERETTLNQLLIELDGFDTGKGVIFLG 731
            KPSVIFIDEIDALATRRQG+  EST+ LYNAATQERETTLNQLLIELDGFDTGKGVIFL 
Sbjct: 507  KPSVIFIDEIDALATRRQGIFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLA 566

Query: 732  AT 737
            AT
Sbjct: 567  AT 568


>ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp.
            lyrata] gi|297315589|gb|EFH46012.1| hypothetical protein
            ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata]
          Length = 933

 Score =  423 bits (1088), Expect = e-116
 Identities = 212/247 (85%), Positives = 228/247 (92%), Gaps = 4/247 (1%)
 Frame = +3

Query: 9    FGILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLKPIMLVFVTMVLLIRFTLSR 176
            FG+LE  WD + D    GGI S++ +FYTFGGVSSSLEMLKPI+LV +TMVLL+RFTLSR
Sbjct: 324  FGVLEKSWDYLVDFLGDGGIFSRISDFYTFGGVSSSLEMLKPILLVVMTMVLLVRFTLSR 383

Query: 177  RPKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRYLKNPELFD 356
            RPKNFRKWD+WQGI F QSK +ARVDGSTGV F DVAGIDEAVDELQELV+YLKNP+LFD
Sbjct: 384  RPKNFRKWDLWQGIAFSQSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFD 443

Query: 357  KMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFK 536
            KMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFK
Sbjct: 444  KMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFK 503

Query: 537  RAKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQERETTLNQLLIELDGFDTGKG 716
            RAKVNKPSVIFIDEIDALATRRQG+  E+++ LYNAATQERETTLNQLLIELDGFDTGKG
Sbjct: 504  RAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKG 563

Query: 717  VIFLGAT 737
            VIFLGAT
Sbjct: 564  VIFLGAT 570


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
            gi|2262118|gb|AAB63626.1| cell division protein isolog
            [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
            division protein-like [Arabidopsis thaliana]
            gi|7269243|emb|CAB81312.1| cell division protein-like
            [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
            extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score =  421 bits (1081), Expect = e-115
 Identities = 211/246 (85%), Positives = 227/246 (92%), Gaps = 4/246 (1%)
 Frame = +3

Query: 12   GILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLKPIMLVFVTMVLLIRFTLSRR 179
            G+LE  WD I D    GGI S++ +FYTFGGV+SSLEMLKPI+LV +TMVLL+RFTLSRR
Sbjct: 338  GVLEKSWDYIVDVLADGGIFSRISDFYTFGGVASSLEMLKPILLVVMTMVLLVRFTLSRR 397

Query: 180  PKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRYLKNPELFDK 359
            PKNFRKWD+WQGI F QSK +ARVDGSTGV F DVAGIDEAVDELQELV+YLKNP+LFDK
Sbjct: 398  PKNFRKWDLWQGIAFSQSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDK 457

Query: 360  MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKR 539
            MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKR
Sbjct: 458  MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKR 517

Query: 540  AKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQERETTLNQLLIELDGFDTGKGV 719
            AKVNKPSVIFIDEIDALATRRQG+  E+++ LYNAATQERETTLNQLLIELDGFDTGKGV
Sbjct: 518  AKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGV 577

Query: 720  IFLGAT 737
            IFLGAT
Sbjct: 578  IFLGAT 583