BLASTX nr result

ID: Coptis25_contig00001869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001869
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216...   260   4e-67
ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253...   253   4e-65
emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]   253   4e-65
emb|CBI16094.3| unnamed protein product [Vitis vinifera]              240   5e-61
ref|XP_002520534.1| DNA binding protein, putative [Ricinus commu...   226   7e-57

>ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
           gi|449470904|ref|XP_004153145.1| PREDICTED:
           uncharacterized protein LOC101205712 [Cucumis sativus]
           gi|449525506|ref|XP_004169758.1| PREDICTED:
           uncharacterized LOC101205712 [Cucumis sativus]
          Length = 336

 Score =  260 bits (664), Expect = 4e-67
 Identities = 160/307 (52%), Positives = 187/307 (60%), Gaps = 33/307 (10%)
 Frame = -1

Query: 884 DPSCKTSASEERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQ 705
           D SC   A EERV EWETGLP A DLTPLSQ LI PELASAFSI+  P +T++DVNRASQ
Sbjct: 20  DESC---AHEERVFEWETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQ 76

Query: 704 NTISSLRR-QNSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVEN 528
           NT+S+LR  Q   F   NFKS   F +DR    + M              + RK++ V+ 
Sbjct: 77  NTLSNLRGFQAQAFSSNNFKS---FNDDRTQDHDAMVVEGDEATERDAGSDSRKLRKVDC 133

Query: 527 VEEADSALRMENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNV 348
            EEADSALR +N  +D SARTLKR RLVWTPQLHKRFVDVV HLGI NAVPKTIMQ+MNV
Sbjct: 134 AEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 193

Query: 347 EGLTRENVASHLQKYRLFVKR------QGPASSDQLFASTPTVPQ--------------N 228
           EGLTRENVASHLQKYRL++KR      +GP+S D++FASTP  P               +
Sbjct: 194 EGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPPTLHESTNSGQANGNGH 253

Query: 227 MPLAS-MPY--------VAXXXXXXXXXXXXXXGNLAPGS---YSGFEFHPYGMSREHQG 84
           +P+ + MPY        V                   PGS   Y GFE HP+ M   HQ 
Sbjct: 254 LPVPTPMPYGPPMMPMPVLGMAASGHAHSYMGMPVAHPGSAQGYPGFETHPFNMM--HQR 311

Query: 83  HWPGNKF 63
            W GNK+
Sbjct: 312 DWSGNKY 318


>ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
          Length = 311

 Score =  253 bits (647), Expect = 4e-65
 Identities = 152/283 (53%), Positives = 181/283 (63%), Gaps = 28/283 (9%)
 Frame = -1

Query: 857 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 678
           +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 18  DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 77

Query: 677 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEADSALRM 498
           +  F   NFKS   F E+R   +  +              E RK++ V+  EEADSA+R 
Sbjct: 78  SHSFSSNNFKS---FNEER-NREPAVVEPEETGDRDGSGSESRKVRKVDCAEEADSAMRT 133

Query: 497 ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 318
           EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 134 ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 193

Query: 317 HLQKYRLFVKR------QGPASSDQLFASTPTVPQNMPLAS------------------M 210
           HLQKYRL++KR      +GP+SSD LFASTP VPQ++  +                   M
Sbjct: 194 HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPIPM 252

Query: 209 PYVAXXXXXXXXXXXXXXGNL---APGSYSGFE-FHPYGMSRE 93
           PY                G +    PG Y G+E  HPY M ++
Sbjct: 253 PYGQTMMHMPVLGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 295


>emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
          Length = 362

 Score =  253 bits (647), Expect = 4e-65
 Identities = 152/283 (53%), Positives = 181/283 (63%), Gaps = 28/283 (9%)
 Frame = -1

Query: 857 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 678
           +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 69  DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 128

Query: 677 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEADSALRM 498
           +  F   NFKS   F E+R   +  +              E RK++ V+  EEADSA+R 
Sbjct: 129 SHSFSSNNFKS---FNEER-NREPAVVEPEETGDRDGSGSESRKVRKVDCAEEADSAMRT 184

Query: 497 ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 318
           EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 185 ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 244

Query: 317 HLQKYRLFVKR------QGPASSDQLFASTPTVPQNMPLAS------------------M 210
           HLQKYRL++KR      +GP+SSD LFASTP VPQ++  +                   M
Sbjct: 245 HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPIPM 303

Query: 209 PYVAXXXXXXXXXXXXXXGNL---APGSYSGFE-FHPYGMSRE 93
           PY                G +    PG Y G+E  HPY M ++
Sbjct: 304 PYGQTMMHMPVLGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 346


>emb|CBI16094.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  240 bits (612), Expect = 5e-61
 Identities = 149/283 (52%), Positives = 174/283 (61%), Gaps = 28/283 (9%)
 Frame = -1

Query: 857 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 678
           +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 129 DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 188

Query: 677 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEADSALRM 498
           +  F   NFKS   F E+R  + EP                           EADSA+R 
Sbjct: 189 SHSFSSNNFKS---FNEER--NREPA--------------------------EADSAMRT 217

Query: 497 ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 318
           EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 218 ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 277

Query: 317 HLQKYRLFVKR------QGPASSDQLFASTPTVPQNMPLAS------------------M 210
           HLQKYRL++KR      +GP+SSD LFASTP VPQ++  +                   M
Sbjct: 278 HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPIPM 336

Query: 209 PYVAXXXXXXXXXXXXXXGNL---APGSYSGFE-FHPYGMSRE 93
           PY                G +    PG Y G+E  HPY M ++
Sbjct: 337 PYGQTMMHMPVLGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 379


>ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
           gi|223540376|gb|EEF41947.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 316

 Score =  226 bits (576), Expect = 7e-57
 Identities = 128/220 (58%), Positives = 158/220 (71%), Gaps = 9/220 (4%)
 Frame = -1

Query: 857 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 678
           EERV++WE GLP+A DLTPLSQ LI PELASAFSI+ EP ++++DVNR SQNT+ SLR  
Sbjct: 23  EERVRDWEFGLPTADDLTPLSQPLIPPELASAFSISPEPHRSIIDVNRESQNTLLSLRSA 82

Query: 677 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEADSALRM 498
              F    FKS   +  +   + E                ++ K++ +++ EEADSALR 
Sbjct: 83  TGAFSSNKFKS---YNNNDDPTAETAVEEINNNTNNNNDTDQEKLRRIDSGEEADSALRT 139

Query: 497 ENLN--EDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENV 324
           ENL   +  +ARTLKR RLVWTPQLHKRFVDVV +LGI NAVPKTIMQ+MNVEGLTRENV
Sbjct: 140 ENLTGEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENV 199

Query: 323 ASHLQKYRLFVKR------QGPASSD-QLFASTPTVPQNM 225
           ASHLQKYRL++KR      +GP++SD QLFASTP VPQ++
Sbjct: 200 ASHLQKYRLYLKRMQGLSSEGPSASDNQLFASTP-VPQSL 238


Top