BLASTX nr result

ID: Coptis25_contig00001857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001857
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...   145   5e-33
ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...   141   1e-31
ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...   136   4e-30
ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865...   129   3e-28
gb|ABY79158.1| At5g03870 [Arabidopsis thaliana] gi|166065029|gb|...   127   2e-27

>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score =  145 bits (367), Expect = 5e-33
 Identities = 78/143 (54%), Positives = 101/143 (70%), Gaps = 13/143 (9%)
 Frame = -3

Query: 513 ASARRELSEQ----------LKKVSISAKSRSTESLLKSLEKQCPPGGENSVIVYTTT-G 367
           AS  +ELSE+          + KV     SR  ES+L   EK+CPPGG N+V++YTTT  
Sbjct: 205 ASFEKELSEEKEQIKKIVSPIPKVQKLRNSRDCESILDLFEKKCPPGGANAVVIYTTTLR 264

Query: 366 GNREPFKDSNKIRSMLQSHHIQMFERDIYKDALFREQLKGLMG--YIKVPLMFVKGRLVG 193
           G R+ F+D N +RS+L+SHHI MFERDI  D+  +E+L+GLMG   +KVPL+FVKGRL+G
Sbjct: 265 GIRKTFEDCNHVRSILESHHIHMFERDISMDSGLKEELRGLMGTKEVKVPLVFVKGRLIG 324

Query: 192 GADEVMVMEENGDLGILFDGIPK 124
           GADEV+ +EE G L ILFDGIP+
Sbjct: 325 GADEVVKLEEEGKLDILFDGIPR 347


>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  141 bits (355), Expect = 1e-31
 Identities = 76/140 (54%), Positives = 104/140 (74%), Gaps = 14/140 (10%)
 Frame = -3

Query: 501 RELSEQLKKV----SISAK-------SRSTESLLKSLEKQCPPGGENSVIVYTTT-GGNR 358
           REL+E+ +KV    SI+ K       S   ES+L+S E++CPPGGEN+V++YTTT  G R
Sbjct: 236 RELTEEEEKVKRIISITPKPHQKFKNSLQLESILQSFEQKCPPGGENAVVLYTTTLRGIR 295

Query: 357 EPFKDSNKIRSMLQSHHIQMFERDIYKDALFREQLKGLMG--YIKVPLMFVKGRLVGGAD 184
           + F+D N +RS+++SHHI M ERDI  D+  +E+L+ LMG   +KVPL+FVKGRL+GGAD
Sbjct: 296 KTFEDCNTVRSIIESHHIHMLERDISMDSGLKEELRRLMGTKVVKVPLVFVKGRLIGGAD 355

Query: 183 EVMVMEENGDLGILFDGIPK 124
           +V+ +EE G LGILFDGIP+
Sbjct: 356 QVVKLEEEGKLGILFDGIPR 375


>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score =  136 bits (342), Expect = 4e-30
 Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 10/135 (7%)
 Frame = -3

Query: 498 ELSEQLKKVSISAKS-------RSTESLLKSLEKQCPPGGENSVIVYTTT-GGNREPFKD 343
           E  EQ+K++ + +         R  ES+L+S E++CPPGGEN V++YTTT  G R+ F+D
Sbjct: 221 EEEEQIKRIILPSSRTKKVKDLRDLESILQSFEQKCPPGGENKVVIYTTTLRGIRKTFED 280

Query: 342 SNKIRSMLQSHHIQMFERDIYKDALFREQLKGLMGY--IKVPLMFVKGRLVGGADEVMVM 169
            N  RS+++SHHI + ERD+  D+ F+E+L+ LMG   +KVPL+FVKGRL+GGAD+V+ +
Sbjct: 281 CNTARSIIESHHIHIVERDVSMDSGFKEELRRLMGTKEVKVPLVFVKGRLIGGADQVVKL 340

Query: 168 EENGDLGILFDGIPK 124
           EE G L ILFDGIP+
Sbjct: 341 EEEGKLEILFDGIPR 355


>ref|XP_004149222.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449522666|ref|XP_004168347.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 397

 Score =  129 bits (325), Expect = 3e-28
 Identities = 70/134 (52%), Positives = 98/134 (73%), Gaps = 10/134 (7%)
 Frame = -3

Query: 498 ELSEQLKK-VSISAKSRS------TESLLKSLEKQCPPGGENSVIVYTTT-GGNREPFKD 343
           E  EQ+K+ VS + KSR+      +E+ LK  E+ CPPGGE SV++YTTT  G R+ F+D
Sbjct: 211 EEGEQIKRIVSETPKSRAARHFQESETALKKFEELCPPGGETSVVIYTTTLRGIRKTFED 270

Query: 342 SNKIRSMLQSHHIQMFERDIYKDALFREQLKGLMG--YIKVPLMFVKGRLVGGADEVMVM 169
            NK+RS+++S+ I + ERD+  D+ F+E+L+ LMG   +KVP +FVKGRL+GGA EV+ M
Sbjct: 271 CNKVRSIVESYGIHVVERDVSMDSGFKEELRALMGSKEVKVPAVFVKGRLIGGAAEVLKM 330

Query: 168 EENGDLGILFDGIP 127
           EE G LG+LF+GIP
Sbjct: 331 EEEGKLGVLFEGIP 344


>gb|ABY79158.1| At5g03870 [Arabidopsis thaliana] gi|166065029|gb|ABY79159.1|
           At5g03870 [Arabidopsis thaliana]
           gi|166065031|gb|ABY79160.1| At5g03870 [Arabidopsis
           thaliana] gi|166065035|gb|ABY79162.1| At5g03870
           [Arabidopsis thaliana] gi|166065043|gb|ABY79166.1|
           At5g03870 [Arabidopsis thaliana]
           gi|166065049|gb|ABY79169.1| At5g03870 [Arabidopsis
           thaliana] gi|166065051|gb|ABY79170.1| At5g03870
           [Arabidopsis thaliana]
          Length = 368

 Score =  127 bits (319), Expect = 2e-27
 Identities = 62/140 (44%), Positives = 98/140 (70%), Gaps = 11/140 (7%)
 Frame = -3

Query: 513 ASARRELSEQLKKVSI--------SAKSRSTESLLKSLEKQCPPGGENSVIVYTTT-GGN 361
           AS  RELS++ +++ +        S K+  TE +L+   ++CPPGGE+SV++Y TT  G 
Sbjct: 176 ASYERELSQEKEQIKMVISPVVHESRKTEKTERILEKFPEKCPPGGEHSVVIYITTLRGI 235

Query: 360 REPFKDSNKIRSMLQSHHIQMFERDIYKDALFREQLKGLMG--YIKVPLMFVKGRLVGGA 187
           R+ F+D N +RS+L SH ++  ERD+   ++F+E+++G+MG  ++K+P +FVKGR+VG  
Sbjct: 236 RKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGTKHVKIPAVFVKGRMVGSV 295

Query: 186 DEVMVMEENGDLGILFDGIP 127
           +EVM +EE G LGIL +GIP
Sbjct: 296 EEVMKLEEEGKLGILLEGIP 315


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