BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001842
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135644.1| PREDICTED: trafficking protein particle comp...   209   1e-62
ref|XP_003574081.1| PREDICTED: trafficking protein particle comp...   208   7e-60
ref|XP_003576569.1| PREDICTED: trafficking protein particle comp...   201   1e-58
ref|NP_001059395.1| Os07g0291100 [Oryza sativa Japonica Group] g...   205   2e-58
dbj|BAD23535.1| putative trafficking protein particle complex 6B...   204   6e-58

>ref|XP_004135644.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Cucumis sativus]
          Length = 171

 Score =  209 bits (532), Expect(2) = 1e-62
 Identities = 97/117 (82%), Positives = 108/117 (92%)
 Frame = -2

Query: 873 VGREVAESCIDSVITEMVSAYCNRFYSAKPELASPRIEAIGFQVGLQLSERYTMERPRFT 694
           +GREVAESC+DS++TEMVS YC+RFY+ KPELA+ RIEAIG+QVG QLSERYTMERPRFT
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFT 60

Query: 693 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRMSIEPSKNSSDH 523
           DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDN FRWLTRMS++P   S D+
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDN 117



 Score = 57.8 bits (138), Expect(2) = 1e-62
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = -1

Query: 406 SQAAEMHLCFPCGIIRGALTNLGIPCAVSAEV 311
           +QA  MHL FPCGIIRGAL+NLGIPCAVSA++
Sbjct: 126 AQATSMHLYFPCGIIRGALSNLGIPCAVSADI 157


>ref|XP_003574081.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Brachypodium distachyon]
          Length = 175

 Score =  208 bits (530), Expect(2) = 7e-60
 Identities = 97/116 (83%), Positives = 109/116 (93%)
 Frame = -2

Query: 873 VGREVAESCIDSVITEMVSAYCNRFYSAKPELASPRIEAIGFQVGLQLSERYTMERPRFT 694
           +GREVAESC+D V+ EMVSAYC+RFY+AKPELA+ RIEAIGFQVG QLSERYTM+RPRF+
Sbjct: 1   MGREVAESCLDGVVMEMVSAYCSRFYAAKPELAAGRIEAIGFQVGHQLSERYTMDRPRFS 60

Query: 693 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRMSIEPSKNSSD 526
           DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHF WLTR+S++PS  S+D
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFPWLTRVSLDPSMESTD 116



 Score = 49.3 bits (116), Expect(2) = 7e-60
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -1

Query: 406 SQAAEMHLCFPCGIIRGALTNLGIPCAVSAEV 311
           +Q   M L FPCGIIRGALTNLGI CAVSA++
Sbjct: 130 AQTTTMLLYFPCGIIRGALTNLGITCAVSADM 161


>ref|XP_003576569.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Brachypodium distachyon]
          Length = 175

 Score =  201 bits (510), Expect(2) = 1e-58
 Identities = 95/116 (81%), Positives = 105/116 (90%)
 Frame = -2

Query: 873 VGREVAESCIDSVITEMVSAYCNRFYSAKPELASPRIEAIGFQVGLQLSERYTMERPRFT 694
           +GREVA SC+D V+ EMVSAYC RFY+AKPELA+ RIEAIGFQVG QLSERYTM+RPRFT
Sbjct: 1   MGREVAGSCLDGVVMEMVSAYCGRFYAAKPELAAGRIEAIGFQVGHQLSERYTMDRPRFT 60

Query: 693 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRMSIEPSKNSSD 526
           DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDN F WLT +S++PS  S+D
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNCFPWLTHVSLDPSMESTD 116



 Score = 52.8 bits (125), Expect(2) = 1e-58
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = -1

Query: 406 SQAAEMHLCFPCGIIRGALTNLGIPCAVSAEV 311
           +Q   M L FPCGIIRGALTNLGIPCAVSA++
Sbjct: 130 AQTTSMLLYFPCGIIRGALTNLGIPCAVSADM 161


>ref|NP_001059395.1| Os07g0291100 [Oryza sativa Japonica Group]
           gi|34393878|dbj|BAC83558.1| unknown protein [Oryza
           sativa Japonica Group] gi|113610931|dbj|BAF21309.1|
           Os07g0291100 [Oryza sativa Japonica Group]
           gi|215686607|dbj|BAG88860.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222636854|gb|EEE66986.1| hypothetical protein
           OsJ_23884 [Oryza sativa Japonica Group]
          Length = 175

 Score =  205 bits (522), Expect(2) = 2e-58
 Identities = 95/116 (81%), Positives = 107/116 (92%)
 Frame = -2

Query: 873 VGREVAESCIDSVITEMVSAYCNRFYSAKPELASPRIEAIGFQVGLQLSERYTMERPRFT 694
           +GREVAESC+D V+ +MV+AYC  FY+AKPELA+ RIEAIGFQVG QL+ERYTMERPRF+
Sbjct: 1   MGREVAESCVDGVVMQMVAAYCGGFYAAKPELAARRIEAIGFQVGHQLTERYTMERPRFS 60

Query: 693 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRMSIEPSKNSSD 526
           DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTR+S++PS  S D
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRVSVDPSVESMD 116



 Score = 47.4 bits (111), Expect(2) = 2e-58
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -1

Query: 406 SQAAEMHLCFPCGIIRGALTNLGIPCAVSAEV 311
           +Q   M L FPCGIIRGALTNLGI C+V+A++
Sbjct: 130 AQTTSMLLYFPCGIIRGALTNLGISCSVTADM 161


>dbj|BAD23535.1| putative trafficking protein particle complex 6B [Oryza sativa
           Japonica Group] gi|215692752|dbj|BAG88172.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704188|dbj|BAG93028.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 175

 Score =  204 bits (518), Expect(2) = 6e-58
 Identities = 96/114 (84%), Positives = 105/114 (92%)
 Frame = -2

Query: 867 REVAESCIDSVITEMVSAYCNRFYSAKPELASPRIEAIGFQVGLQLSERYTMERPRFTDH 688
           REVAESC+D V+ EMV+AYC RFY+AKPELA+ RIEAIGFQVG QL+ERYTMERPRF+DH
Sbjct: 3   REVAESCVDGVVMEMVAAYCGRFYAAKPELAARRIEAIGFQVGHQLTERYTMERPRFSDH 62

Query: 687 LEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRMSIEPSKNSSD 526
           LEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDN FRWLTR+SI+PS  S D
Sbjct: 63  LEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRVSIDPSVESMD 116



 Score = 47.4 bits (111), Expect(2) = 6e-58
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -1

Query: 406 SQAAEMHLCFPCGIIRGALTNLGIPCAVSAEV 311
           +Q   M L FPCGIIRGALTNLGI C+V+A++
Sbjct: 130 AQTTSMLLYFPCGIIRGALTNLGISCSVTADM 161