BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001840
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [V...   106   2e-21
emb|CBI17596.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002514807.1| 60S ribosomal protein L38, putative [Ricinus...   106   2e-21
ref|XP_002533843.1| 60S ribosomal protein L38, putative [Ricinus...   106   2e-21
gb|AFK42835.1| unknown [Lotus japonicus]                              105   4e-21

>ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [Vitis vinifera]
           gi|449442271|ref|XP_004138905.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449454586|ref|XP_004145035.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449506284|ref|XP_004162704.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
          Length = 69

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/68 (79%), Positives = 54/68 (79%)
 Frame = +3

Query: 138 PKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXXRCSKYLYTLCVFDSEKADKLKQSLP 317
           PKQIHEIKDFLLTARRKDARS              RCSKYLYTLCVFDSEKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 61

Query: 318 PGLSVQDL 341
           PGLSVQDL
Sbjct: 62  PGLSVQDL 69


>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/68 (79%), Positives = 54/68 (79%)
 Frame = +3

Query: 138 PKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXXRCSKYLYTLCVFDSEKADKLKQSLP 317
           PKQIHEIKDFLLTARRKDARS              RCSKYLYTLCVFDSEKADKLKQSLP
Sbjct: 60  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 119

Query: 318 PGLSVQDL 341
           PGLSVQDL
Sbjct: 120 PGLSVQDL 127


>ref|XP_002514807.1| 60S ribosomal protein L38, putative [Ricinus communis]
           gi|223545858|gb|EEF47361.1| 60S ribosomal protein L38,
           putative [Ricinus communis]
          Length = 78

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/68 (79%), Positives = 54/68 (79%)
 Frame = +3

Query: 138 PKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXXRCSKYLYTLCVFDSEKADKLKQSLP 317
           PKQIHEIKDFLLTARRKDARS              RCSKYLYTLCVFDSEKADKLKQSLP
Sbjct: 11  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 70

Query: 318 PGLSVQDL 341
           PGLSVQDL
Sbjct: 71  PGLSVQDL 78


>ref|XP_002533843.1| 60S ribosomal protein L38, putative [Ricinus communis]
           gi|223526222|gb|EEF28545.1| 60S ribosomal protein L38,
           putative [Ricinus communis]
          Length = 96

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/68 (79%), Positives = 54/68 (79%)
 Frame = +3

Query: 138 PKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXXRCSKYLYTLCVFDSEKADKLKQSLP 317
           PKQIHEIKDFLLTARRKDARS              RCSKYLYTLCVFDSEKADKLKQSLP
Sbjct: 29  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 88

Query: 318 PGLSVQDL 341
           PGLSVQDL
Sbjct: 89  PGLSVQDL 96


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/68 (77%), Positives = 54/68 (79%)
 Frame = +3

Query: 138 PKQIHEIKDFLLTARRKDARSXXXXXXXXXXXXXXRCSKYLYTLCVFDSEKADKLKQSLP 317
           PKQIHEIKDFLLTARRKDARS              RCSKYLYTLCVFD+EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSLP 61

Query: 318 PGLSVQDL 341
           PGLSVQDL
Sbjct: 62  PGLSVQDL 69