BLASTX nr result

ID: Coptis25_contig00001838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001838
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631875.1| PREDICTED: UPF0183 protein At3g51130-like [V...   603   0.0  
ref|XP_003537624.1| PREDICTED: UPF0183 protein At3g51130-like [G...   580   0.0  
ref|XP_003612120.1| hypothetical protein MTR_5g021520 [Medicago ...   576   0.0  
emb|CBI17410.3| unnamed protein product [Vitis vinifera]              603   0.0  
ref|XP_004134877.1| PREDICTED: UPF0183 protein At3g51130-like [C...   575   0.0  

>ref|XP_003631875.1| PREDICTED: UPF0183 protein At3g51130-like [Vitis vinifera]
          Length = 402

 Score =  603 bits (1556), Expect(2) = 0.0
 Identities = 287/318 (90%), Positives = 299/318 (94%)
 Frame = +1

Query: 370  QRLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPG 549
            QRLRLIE+FDVKRLQMRY TS+IGGPS LATFVAVYALFGPTFPG YDKDRGVYTLFYPG
Sbjct: 85   QRLRLIEIFDVKRLQMRYATSLIGGPSTLATFVAVYALFGPTFPGSYDKDRGVYTLFYPG 144

Query: 550  LSFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAP 729
            LSFAFPIP QY DCC+DGEAELPLEFPDGTTPVTCRVSIYDSS DSKVGVGS M KA+AP
Sbjct: 145  LSFAFPIPTQYTDCCHDGEAELPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSSMEKASAP 204

Query: 730  PLPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHS 909
            PLPAGS+YMEEVH KLGEEL F VGGQHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHS
Sbjct: 205  PLPAGSLYMEEVHVKLGEELRFTVGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHS 264

Query: 910  ASDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIY 1089
            ASDPRPRTTLCGDYFYNYF RG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+IY
Sbjct: 265  ASDPRPRTTLCGDYFYNYFDRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIY 324

Query: 1090 GSEGGGLFREGNASKHCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNV 1269
            GS+ GG F+E   SKH ITPSTKWEQVKEILGDCGRAAIQTQGST+NPFGSTFVYGYQNV
Sbjct: 325  GSDFGGSFQEVKMSKHRITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNV 384

Query: 1270 AFEVMKNGYIATVTLFQS 1323
            AFEVMKNGYIATVTLFQS
Sbjct: 385  AFEVMKNGYIATVTLFQS 402



 Score =  166 bits (421), Expect(2) = 0.0
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +3

Query: 93  MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 272
           M QR RRRCEGTAMGAIVLDL+PGLGIGPF+LGMPI +AFAQIEQQPNIYDVVHVKY DE
Sbjct: 1   MLQRPRRRCEGTAMGAIVLDLKPGLGIGPFSLGMPISKAFAQIEQQPNIYDVVHVKYFDE 60

Query: 273 EPLKLDIVISFPDHGFHLRFDPWSQ 347
           EPLKLDIVISFPDHGFHLRFDPWSQ
Sbjct: 61  EPLKLDIVISFPDHGFHLRFDPWSQ 85


>ref|XP_003537624.1| PREDICTED: UPF0183 protein At3g51130-like [Glycine max]
          Length = 403

 Score =  580 bits (1494), Expect(2) = 0.0
 Identities = 275/319 (86%), Positives = 295/319 (92%), Gaps = 1/319 (0%)
 Frame = +1

Query: 370  QRLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPG 549
            QRLRLIE+FDVKRLQM Y TS+IGGPS LATFVAVYALFGPT+PGI+DKDR +YTLFYPG
Sbjct: 85   QRLRLIEIFDVKRLQMCYSTSLIGGPSTLATFVAVYALFGPTYPGIFDKDRRIYTLFYPG 144

Query: 550  LSFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAP 729
            LSFAFPIP Q+ DCC+DG  ELPLEFPDGTTPVTCRVSIYDSS+  KVGVG+LM+KA+AP
Sbjct: 145  LSFAFPIPSQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGALMDKASAP 204

Query: 730  PLPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHS 909
            PLPAGSIYMEEVH KLGEEL+F VG QHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHS
Sbjct: 205  PLPAGSIYMEEVHVKLGEELYFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHS 264

Query: 910  ASDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIY 1089
            ASD RPRTTLCGDYFYNYFTRG DILFDGQTHKIKKFVLHTNFPGHADFNSY+KCNF++Y
Sbjct: 265  ASDLRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNFPGHADFNSYIKCNFVVY 324

Query: 1090 GSEGGGLFREGNASK-HCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQN 1266
            GS+ GG F+E N SK   ITPSTKWEQVKEILGDCGRAAIQTQGS SNPFGST VYGYQN
Sbjct: 325  GSDLGGSFQEVNNSKQRVITPSTKWEQVKEILGDCGRAAIQTQGSASNPFGSTLVYGYQN 384

Query: 1267 VAFEVMKNGYIATVTLFQS 1323
            +AFEVMKNGYIAT+TLFQS
Sbjct: 385  IAFEVMKNGYIATITLFQS 403



 Score =  172 bits (437), Expect(2) = 0.0
 Identities = 80/85 (94%), Positives = 82/85 (96%)
 Frame = +3

Query: 93  MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 272
           M QR RRRCEGTAMGAIVLDLRPGLGIGPF+LGMPICEAFAQIEQQPNIYDVVHVKY DE
Sbjct: 1   MLQRPRRRCEGTAMGAIVLDLRPGLGIGPFSLGMPICEAFAQIEQQPNIYDVVHVKYFDE 60

Query: 273 EPLKLDIVISFPDHGFHLRFDPWSQ 347
           EPLKLD+VISFPDHGFHLRFDPWSQ
Sbjct: 61  EPLKLDVVISFPDHGFHLRFDPWSQ 85


>ref|XP_003612120.1| hypothetical protein MTR_5g021520 [Medicago truncatula]
            gi|355513455|gb|AES95078.1| hypothetical protein
            MTR_5g021520 [Medicago truncatula]
          Length = 404

 Score =  576 bits (1485), Expect(2) = 0.0
 Identities = 273/320 (85%), Positives = 296/320 (92%), Gaps = 2/320 (0%)
 Frame = +1

Query: 370  QRLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPG 549
            QRLRLIE+FDVKRLQMRY TS+IGGP+ LATFVAVYALFGPT+PGI+DKDRG+YTLFYPG
Sbjct: 85   QRLRLIEIFDVKRLQMRYSTSLIGGPTTLATFVAVYALFGPTYPGIFDKDRGIYTLFYPG 144

Query: 550  LSFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAP 729
            LSFAFPIPGQ+ DCC+DG  ELPLEFPDGTTPVTCRVSIYDSS+  KVGVGSLM+KA+AP
Sbjct: 145  LSFAFPIPGQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGSLMDKASAP 204

Query: 730  PLPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHS 909
            PLP GSIYMEEVH KLGEEL+F VG QHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHS
Sbjct: 205  PLPTGSIYMEEVHVKLGEELYFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHS 264

Query: 910  ASDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIY 1089
            ASD RPRTT+CGDYFYNYFTRG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+IY
Sbjct: 265  ASDLRPRTTICGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIY 324

Query: 1090 GSEG-GGLFREGNASK-HCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQ 1263
             S+  GG F++ N SK   ITPSTKWEQVK+ILGDCGRAAIQTQGS SNPFGST VYGYQ
Sbjct: 325  CSDAVGGSFQDVNNSKQRVITPSTKWEQVKDILGDCGRAAIQTQGSASNPFGSTLVYGYQ 384

Query: 1264 NVAFEVMKNGYIATVTLFQS 1323
            N+AFEVMKNGYIAT+TLFQS
Sbjct: 385  NIAFEVMKNGYIATITLFQS 404



 Score =  172 bits (436), Expect(2) = 0.0
 Identities = 80/85 (94%), Positives = 82/85 (96%)
 Frame = +3

Query: 93  MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 272
           M QR RRRCEGTAMGAIVLDLRPGLGIGPF+LGMPICEAFAQIEQQPN+YDVVHVKY DE
Sbjct: 1   MLQRPRRRCEGTAMGAIVLDLRPGLGIGPFSLGMPICEAFAQIEQQPNLYDVVHVKYFDE 60

Query: 273 EPLKLDIVISFPDHGFHLRFDPWSQ 347
           EPLKLDIVISFPDHGFHLRFDPWSQ
Sbjct: 61  EPLKLDIVISFPDHGFHLRFDPWSQ 85


>emb|CBI17410.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  603 bits (1556), Expect(2) = 0.0
 Identities = 287/318 (90%), Positives = 299/318 (94%)
 Frame = +1

Query: 370  QRLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPG 549
            QRLRLIE+FDVKRLQMRY TS+IGGPS LATFVAVYALFGPTFPG YDKDRGVYTLFYPG
Sbjct: 72   QRLRLIEIFDVKRLQMRYATSLIGGPSTLATFVAVYALFGPTFPGSYDKDRGVYTLFYPG 131

Query: 550  LSFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAP 729
            LSFAFPIP QY DCC+DGEAELPLEFPDGTTPVTCRVSIYDSS DSKVGVGS M KA+AP
Sbjct: 132  LSFAFPIPTQYTDCCHDGEAELPLEFPDGTTPVTCRVSIYDSSTDSKVGVGSSMEKASAP 191

Query: 730  PLPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHS 909
            PLPAGS+YMEEVH KLGEEL F VGGQHIPFGASPQDVWT+LGRPCGIHQKQVDQMVIHS
Sbjct: 192  PLPAGSLYMEEVHVKLGEELRFTVGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHS 251

Query: 910  ASDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIY 1089
            ASDPRPRTTLCGDYFYNYF RG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+IY
Sbjct: 252  ASDPRPRTTLCGDYFYNYFDRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYMKCNFVIY 311

Query: 1090 GSEGGGLFREGNASKHCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNV 1269
            GS+ GG F+E   SKH ITPSTKWEQVKEILGDCGRAAIQTQGST+NPFGSTFVYGYQNV
Sbjct: 312  GSDFGGSFQEVKMSKHRITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNV 371

Query: 1270 AFEVMKNGYIATVTLFQS 1323
            AFEVMKNGYIATVTLFQS
Sbjct: 372  AFEVMKNGYIATVTLFQS 389



 Score =  145 bits (365), Expect(2) = 0.0
 Identities = 67/72 (93%), Positives = 70/72 (97%)
 Frame = +3

Query: 132 MGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDEEPLKLDIVISFPD 311
           MGAIVLDL+PGLGIGPF+LGMPI +AFAQIEQQPNIYDVVHVKY DEEPLKLDIVISFPD
Sbjct: 1   MGAIVLDLKPGLGIGPFSLGMPISKAFAQIEQQPNIYDVVHVKYFDEEPLKLDIVISFPD 60

Query: 312 HGFHLRFDPWSQ 347
           HGFHLRFDPWSQ
Sbjct: 61  HGFHLRFDPWSQ 72


>ref|XP_004134877.1| PREDICTED: UPF0183 protein At3g51130-like [Cucumis sativus]
          Length = 398

 Score =  575 bits (1481), Expect(2) = 0.0
 Identities = 274/318 (86%), Positives = 294/318 (92%)
 Frame = +1

Query: 370  QRLRLIEVFDVKRLQMRYGTSIIGGPSVLATFVAVYALFGPTFPGIYDKDRGVYTLFYPG 549
            QRLRLIE+FDVKRLQMRY TS+IGGPS LATFVAVYALFGPTFPGIYDKDRGVYTLFYPG
Sbjct: 85   QRLRLIEIFDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPG 144

Query: 550  LSFAFPIPGQYMDCCNDGEAELPLEFPDGTTPVTCRVSIYDSSADSKVGVGSLMNKATAP 729
            LSFAFPIP QY DCC+DGEAELPLEFPDGTTPV CRVSI+DSS   KVG+G+LM+KA+AP
Sbjct: 145  LSFAFPIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAP 204

Query: 730  PLPAGSIYMEEVHAKLGEELWFGVGGQHIPFGASPQDVWTDLGRPCGIHQKQVDQMVIHS 909
            PLPA S+YMEEVH KLG+EL+F VG QHIPFGASPQD+WT+LGRPCGIHQKQVDQMVIHS
Sbjct: 205  PLPASSLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHS 264

Query: 910  ASDPRPRTTLCGDYFYNYFTRGFDILFDGQTHKIKKFVLHTNFPGHADFNSYLKCNFLIY 1089
            ASDPRPRTTLCGDYFYNYFTRG DILFDGQTHKIKKFVLHTN+PGHADFNSY+KCNF+I+
Sbjct: 265  ASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH 324

Query: 1090 GSEGGGLFREGNASKHCITPSTKWEQVKEILGDCGRAAIQTQGSTSNPFGSTFVYGYQNV 1269
             S   G F E N  K+ ITPSTKWE VKEILGDCGRAAIQTQGST+NPFGSTFVYGYQNV
Sbjct: 325  VS---GSFDETNC-KNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNV 380

Query: 1270 AFEVMKNGYIATVTLFQS 1323
            AFEVMKNGYIATVTLF+S
Sbjct: 381  AFEVMKNGYIATVTLFKS 398



 Score =  173 bits (439), Expect(2) = 0.0
 Identities = 80/85 (94%), Positives = 83/85 (97%)
 Frame = +3

Query: 93  MQQRSRRRCEGTAMGAIVLDLRPGLGIGPFTLGMPICEAFAQIEQQPNIYDVVHVKYLDE 272
           MQQRSRRRCEGTAMGAIVLDL+PGLG+GPF LGMPICEAFAQIEQ+PNIYDVVHVKY DE
Sbjct: 1   MQQRSRRRCEGTAMGAIVLDLQPGLGLGPFNLGMPICEAFAQIEQRPNIYDVVHVKYFDE 60

Query: 273 EPLKLDIVISFPDHGFHLRFDPWSQ 347
           EPLKLDIVISFPDHGFHLRFDPWSQ
Sbjct: 61  EPLKLDIVISFPDHGFHLRFDPWSQ 85


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