BLASTX nr result

ID: Coptis25_contig00001819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001819
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB02902.1| mitochondrial import inner membrane translocase s...    92   4e-17
ref|XP_002511123.1| translocase of inner mitochondrial membrane,...    91   1e-16
ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|1...    87   1e-15
ref|XP_002284270.1| PREDICTED: mitochondrial import inner membra...    87   1e-15
ref|XP_002318756.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15

>gb|ADB02902.1| mitochondrial import inner membrane translocase subunit Tim8/small
           zinc finger-like protein [Jatropha curcas]
          Length = 78

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/69 (62%), Positives = 57/69 (82%)
 Frame = +1

Query: 1   M*RFLHEEKQKAMVHQGVSKFTNVCWDKCITSTQATNLAMASQHACLSNCAQRYLDMSLL 180
           M +FL++EK+KAMV++ V+K T+ CWDKCITST  +  + +S+ ACLSNCAQRY+DMSL+
Sbjct: 11  MQQFLNQEKEKAMVNEMVAKLTSECWDKCITSTPGSKFS-SSESACLSNCAQRYMDMSLI 69

Query: 181 TMKYFQSMH 207
            MK FQSMH
Sbjct: 70  IMKRFQSMH 78


>ref|XP_002511123.1| translocase of inner mitochondrial membrane, putative [Ricinus
           communis] gi|223550238|gb|EEF51725.1| translocase of
           inner mitochondrial membrane, putative [Ricinus
           communis]
          Length = 78

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 56/69 (81%)
 Frame = +1

Query: 1   M*RFLHEEKQKAMVHQGVSKFTNVCWDKCITSTQATNLAMASQHACLSNCAQRYLDMSLL 180
           M RFL++EK+KAMV++ V+K T+ CWDKCITST  +  + +S+ +CL+NC QRY+DMSL+
Sbjct: 11  MQRFLNQEKEKAMVNEMVAKLTSACWDKCITSTPGSKFS-SSESSCLTNCTQRYMDMSLI 69

Query: 181 TMKYFQSMH 207
            MK FQSMH
Sbjct: 70  IMKRFQSMH 78


>ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|118483366|gb|ABK93584.1|
           unknown [Populus trichocarpa]
           gi|222869279|gb|EEF06410.1| predicted protein [Populus
           trichocarpa]
          Length = 78

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/67 (58%), Positives = 56/67 (83%)
 Frame = +1

Query: 7   RFLHEEKQKAMVHQGVSKFTNVCWDKCITSTQATNLAMASQHACLSNCAQRYLDMSLLTM 186
           RFL++EK++AMV++ V+K T+ CWDKCITS+  +  + +S+ +CLSNCAQRY+DMSL+ M
Sbjct: 13  RFLNQEKERAMVNEMVAKLTSACWDKCITSSPGSKFS-SSESSCLSNCAQRYMDMSLIIM 71

Query: 187 KYFQSMH 207
           K FQSM+
Sbjct: 72  KRFQSMN 78


>ref|XP_002284270.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim8 [Vitis vinifera] gi|297734470|emb|CBI15717.3|
           unnamed protein product [Vitis vinifera]
          Length = 77

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/65 (61%), Positives = 52/65 (80%)
 Frame = +1

Query: 10  FLHEEKQKAMVHQGVSKFTNVCWDKCITSTQATNLAMASQHACLSNCAQRYLDMSLLTMK 189
           F+ +EK+KAMV++ V+K T VCWDKCITST  +  + +S+  CLSNCAQRY+DMSL+ MK
Sbjct: 13  FISQEKEKAMVNEMVAKLTTVCWDKCITSTPGSKFS-SSESTCLSNCAQRYMDMSLIIMK 71

Query: 190 YFQSM 204
            FQSM
Sbjct: 72  RFQSM 76


>ref|XP_002318756.1| predicted protein [Populus trichocarpa] gi|222859429|gb|EEE96976.1|
           predicted protein [Populus trichocarpa]
          Length = 78

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = +1

Query: 7   RFLHEEKQKAMVHQGVSKFTNVCWDKCITSTQATNLAMASQHACLSNCAQRYLDMSLLTM 186
           RFL EEK++AMV++ V+K T+ CWDKCIT T  + L+ +S+ +CLSNCA+ Y+DMSL+ M
Sbjct: 13  RFLTEEKERAMVNEMVAKLTSACWDKCITGTPGSKLS-SSESSCLSNCARSYMDMSLIIM 71

Query: 187 KYFQSMH 207
           K FQSM+
Sbjct: 72  KRFQSMN 78


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