BLASTX nr result

ID: Coptis25_contig00001804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001804
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264442.1| PREDICTED: uncharacterized protein LOC100260...    90   2e-16
emb|CAN77497.1| hypothetical protein VITISV_040680 [Vitis vinifera]    90   2e-16
gb|AFK41124.1| unknown [Lotus japonicus]                               86   3e-15
ref|XP_003556855.1| PREDICTED: uncharacterized protein LOC100795...    85   6e-15
ref|XP_002323166.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_002264442.1| PREDICTED: uncharacterized protein LOC100260368 [Vitis vinifera]
          Length = 184

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/82 (56%), Positives = 47/82 (57%)
 Frame = +1

Query: 40  IDTLKLGACVDLLGGLVHVIIGSSAKDTCCPVXXXXXXXXXXXXXXTTXXXXXXXXXXXX 219
           IDTLKLGACVDLLGGLVHV IGSSAKDTCCPV              TT            
Sbjct: 103 IDTLKLGACVDLLGGLVHVGIGSSAKDTCCPVLQGLVDSDSALCLCTTIKAKLLNVNIII 162

Query: 220 XXXXXXXXDCGKTPPPGFKCPA 285
                   DCGKTPPPGF+CPA
Sbjct: 163 PIALQVLVDCGKTPPPGFQCPA 184


>emb|CAN77497.1| hypothetical protein VITISV_040680 [Vitis vinifera]
          Length = 182

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/82 (56%), Positives = 47/82 (57%)
 Frame = +1

Query: 40  IDTLKLGACVDLLGGLVHVIIGSSAKDTCCPVXXXXXXXXXXXXXXTTXXXXXXXXXXXX 219
           IDTLKLGACVDLLGGLVHV IGSSAKDTCCPV              TT            
Sbjct: 101 IDTLKLGACVDLLGGLVHVGIGSSAKDTCCPVLQGLVDSDSALCLCTTIKAKLLNVNIII 160

Query: 220 XXXXXXXXDCGKTPPPGFKCPA 285
                   DCGKTPPPGF+CPA
Sbjct: 161 PIALQVLVDCGKTPPPGFQCPA 182


>gb|AFK41124.1| unknown [Lotus japonicus]
          Length = 124

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = -1

Query: 224 IGMIILMLRSLALIVVQRQRAASKSASPPSTGQHVSLALLPIITCTRPPNKSTHAPSLRV 45
           +GM+ILMLRSLAL+VVQR  AASKS SP STGQ V LAL PI  C RPP +STHAPS +V
Sbjct: 1   MGMMILMLRSLALMVVQRHTAASKSTSPASTGQQVCLALPPIPMCIRPPKRSTHAPSFKV 60

Query: 44  SM 39
           S+
Sbjct: 61  SI 62


>ref|XP_003556855.1| PREDICTED: uncharacterized protein LOC100795348 [Glycine max]
          Length = 104

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 43/60 (71%), Positives = 49/60 (81%)
 Frame = -1

Query: 218 MIILMLRSLALIVVQRQRAASKSASPPSTGQHVSLALLPIITCTRPPNKSTHAPSLRVSM 39
           M++LMLR LAL+VVQR  AASKS SP STGQHV LALLP+  C RPP+ STHAPS R+SM
Sbjct: 1   MMMLMLRILALMVVQRHTAASKSTSPASTGQHVCLALLPMPMCMRPPSTSTHAPSFRLSM 60


>ref|XP_002323166.1| predicted protein [Populus trichocarpa] gi|222867796|gb|EEF04927.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/82 (52%), Positives = 45/82 (54%)
 Frame = +1

Query: 40  IDTLKLGACVDLLGGLVHVIIGSSAKDTCCPVXXXXXXXXXXXXXXTTXXXXXXXXXXXX 219
           IDTLKLGACVD+LGGLVH+ IGSSAKD CCPV              TT            
Sbjct: 3   IDTLKLGACVDVLGGLVHIGIGSSAKDACCPVLQGLLDLDAAICLCTTIKAKLLNISIII 62

Query: 220 XXXXXXXXDCGKTPPPGFKCPA 285
                   DCGKTPP GFKCPA
Sbjct: 63  PIALEVLVDCGKTPPEGFKCPA 84


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