BLASTX nr result
ID: Coptis25_contig00001802
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001802
(1006 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-... 203 2e-78
emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera] 203 2e-78
emb|CBI36548.3| unnamed protein product [Vitis vinifera] 203 2e-78
ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-... 200 1e-77
emb|CBI21151.3| unnamed protein product [Vitis vinifera] 192 1e-75
>ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
isoform 1 [Vitis vinifera]
Length = 794
Score = 203 bits (516), Expect(2) = 2e-78
Identities = 104/140 (74%), Positives = 119/140 (85%), Gaps = 9/140 (6%)
Frame = +2
Query: 614 WRGRSSQLPAAGEERSWGENKD-----LRQQEQLSAQFSRAQI----GGPTATLIKAEVP 766
WRGRS+QLPA+GEERSW +++ +Q+QL++QF++AQI GGP L+KAEVP
Sbjct: 136 WRGRSAQLPASGEERSWFDSRQQEANQFNRQDQLNSQFAKAQISSVLGGPAPALVKAEVP 195
Query: 767 WSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAV 946
WSARR LSEK+RVLKTVKGILNKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KAV
Sbjct: 196 WSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAV 255
Query: 947 LEPTFCNMYAILCSDLNEKL 1006
LEPTFC MYA+LCSDLNEKL
Sbjct: 256 LEPTFCPMYALLCSDLNEKL 275
Score = 117 bits (292), Expect(2) = 2e-78
Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 435
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 436 IKREIEAELLGEDQSWGRGDANAQTQSQNR 525
IK+EIEAEL GEDQ+WGRG++N QSQ+R
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSR 127
>emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]
Length = 794
Score = 203 bits (516), Expect(2) = 2e-78
Identities = 104/140 (74%), Positives = 119/140 (85%), Gaps = 9/140 (6%)
Frame = +2
Query: 614 WRGRSSQLPAAGEERSWGENKD-----LRQQEQLSAQFSRAQI----GGPTATLIKAEVP 766
WRGRS+QLPA+GEERSW +++ +Q+QL++QF++AQI GGP L+KAEVP
Sbjct: 136 WRGRSAQLPASGEERSWFDSRQQEANQFNRQDQLNSQFAKAQISSVQGGPAPALVKAEVP 195
Query: 767 WSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAV 946
WSARR LSEK+RVLKTVKGILNKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KAV
Sbjct: 196 WSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAV 255
Query: 947 LEPTFCNMYAILCSDLNEKL 1006
LEPTFC MYA+LCSDLNEKL
Sbjct: 256 LEPTFCPMYALLCSDLNEKL 275
Score = 117 bits (292), Expect(2) = 2e-78
Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 435
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 436 IKREIEAELLGEDQSWGRGDANAQTQSQNR 525
IK+EIEAEL GEDQ+WGRG++N QSQ+R
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSR 127
>emb|CBI36548.3| unnamed protein product [Vitis vinifera]
Length = 630
Score = 203 bits (516), Expect(2) = 2e-78
Identities = 104/140 (74%), Positives = 119/140 (85%), Gaps = 9/140 (6%)
Frame = +2
Query: 614 WRGRSSQLPAAGEERSWGENKD-----LRQQEQLSAQFSRAQI----GGPTATLIKAEVP 766
WRGRS+QLPA+GEERSW +++ +Q+QL++QF++AQI GGP L+KAEVP
Sbjct: 136 WRGRSAQLPASGEERSWFDSRQQEANQFNRQDQLNSQFAKAQISSVLGGPAPALVKAEVP 195
Query: 767 WSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKAV 946
WSARR LSEK+RVLKTVKGILNKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KAV
Sbjct: 196 WSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAV 255
Query: 947 LEPTFCNMYAILCSDLNEKL 1006
LEPTFC MYA+LCSDLNEKL
Sbjct: 256 LEPTFCPMYALLCSDLNEKL 275
Score = 117 bits (292), Expect(2) = 2e-78
Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 435
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 436 IKREIEAELLGEDQSWGRGDANAQTQSQNR 525
IK+EIEAEL GEDQ+WGRG++N QSQ+R
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSR 127
>ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
isoform 2 [Vitis vinifera]
Length = 795
Score = 200 bits (509), Expect(2) = 1e-77
Identities = 103/141 (73%), Positives = 118/141 (83%), Gaps = 10/141 (7%)
Frame = +2
Query: 614 WRGRSSQLPAAGEERSWGENKD-----LRQQEQLSAQFSRAQIG-----GPTATLIKAEV 763
WRGRS+QLPA+GEERSW +++ +Q+QL++QF++AQI GP L+KAEV
Sbjct: 136 WRGRSAQLPASGEERSWFDSRQQEANQFNRQDQLNSQFAKAQISSVLGVGPAPALVKAEV 195
Query: 764 PWSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITTPDILKDVISLIFEKA 943
PWSARR LSEK+RVLKTVKGILNKLTPEKFDLLKGQLIDSGITT DILK VISLIF+KA
Sbjct: 196 PWSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKA 255
Query: 944 VLEPTFCNMYAILCSDLNEKL 1006
VLEPTFC MYA+LCSDLNEKL
Sbjct: 256 VLEPTFCPMYALLCSDLNEKL 276
Score = 117 bits (292), Expect(2) = 1e-77
Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 FGSISSDLPILRPHGGGLAPSS-SLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILN 435
FGS SSDLP+LRPHGG APSS S+K GD EG+ERV++TRD+LLQLRE V V EDIL
Sbjct: 41 FGS-SSDLPVLRPHGG--APSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILK 97
Query: 436 IKREIEAELLGEDQSWGRGDANAQTQSQNR 525
IK+EIEAEL GEDQ+WGRG++N QSQ+R
Sbjct: 98 IKQEIEAELFGEDQNWGRGESNLPNQSQSR 127
>emb|CBI21151.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 192 bits (489), Expect(2) = 1e-75
Identities = 103/151 (68%), Positives = 119/151 (78%), Gaps = 20/151 (13%)
Frame = +2
Query: 614 WRGRSSQLPAAGEERSWG---ENKDL------------RQQEQLSAQFSRAQIG-----G 733
WRGRSSQLPA GE+RSW +NK+L +Q+QL++QF RAQ+ G
Sbjct: 220 WRGRSSQLPATGEDRSWESIRDNKELPSRFESRTQDLNNRQDQLNSQFVRAQLSSNQGVG 279
Query: 734 PTATLIKAEVPWSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITTPDILK 913
P L+KAEVPWSARR +LSE++RVLKTVKGILNKLTPEKFD+LKGQLI+SGITT DILK
Sbjct: 280 PAPVLVKAEVPWSARRVSLSEQERVLKTVKGILNKLTPEKFDVLKGQLIESGITTHDILK 339
Query: 914 DVISLIFEKAVLEPTFCNMYAILCSDLNEKL 1006
VISLIF+KAVLEPTFC MYA+LCSDLNEKL
Sbjct: 340 GVISLIFDKAVLEPTFCPMYALLCSDLNEKL 370
Score = 117 bits (294), Expect(2) = 1e-75
Identities = 73/134 (54%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Frame = +1
Query: 136 FFSLVRE---INRVMQ-ADQTVXXXXXXXXXXXXXXXXXXXXFGNFGSISSDLPILRPHG 303
FFSL +RVMQ ADQTV F + S SSD LRPHG
Sbjct: 79 FFSLQLNSGFASRVMQQADQTVISLRPGGGGGPRGTRFLASRFDSSSSSSSDAQPLRPHG 138
Query: 304 GGLAPSSSLKTGDPWSEGQERVKYTRDQLLQLREAVAVREDILNIKREIEAELLGEDQSW 483
G LAPSS LK+GD EG+ERV+YTRDQLLQLRE V + E+IL IK+EIE+E GEDQ+W
Sbjct: 139 G-LAPSSFLKSGDLRFEGRERVRYTRDQLLQLREVVDIPENILKIKQEIESEFGGEDQNW 197
Query: 484 GRGDANAQTQSQNR 525
RGD N Q QSQ+R
Sbjct: 198 NRGDGNVQPQSQSR 211