BLASTX nr result

ID: Coptis25_contig00001800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001800
         (1744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272134.1| PREDICTED: uncharacterized protein LOC100243...   195   4e-47
ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264...   177   6e-42
ref|XP_002282948.1| PREDICTED: uncharacterized protein LOC100252...   173   1e-40
ref|XP_004146032.1| PREDICTED: uncharacterized protein LOC101209...   168   4e-39
ref|XP_002298903.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-37

>ref|XP_002272134.1| PREDICTED: uncharacterized protein LOC100243523 [Vitis vinifera]
            gi|297740469|emb|CBI30651.3| unnamed protein product
            [Vitis vinifera]
          Length = 559

 Score =  195 bits (495), Expect = 4e-47
 Identities = 105/220 (47%), Positives = 137/220 (62%), Gaps = 2/220 (0%)
 Frame = +3

Query: 1089 LVSDGLSTHVDQTPYLSLNPITTPVTCEPYYGFLPCAPNLWGELFLIVVYEFLLYLGDTY 1268
            LV+DG+  +V Q+P + L    + VTCEP YGFLPC   +WGELFLIVVYEFLL LG+ Y
Sbjct: 29   LVTDGMK-NVTQSPIIGLELSASTVTCEPTYGFLPCTTVVWGELFLIVVYEFLLSLGEQY 87

Query: 1269 ITSGSELLFRILGPGIFGASAFHILGALPGATIVLASGISGSTETAQXXXXXXXXXXXXX 1448
            +++GS+L F+I G GIFGAS FHILG++P   ++L +G+SGST+TA+             
Sbjct: 88   VSAGSDLFFQIFGTGIFGASLFHILGSIPEVAMILVTGLSGSTDTAESMATMSMAMLAGS 147

Query: 1449 XXXXXXXXXXXXXXXXKVDI--SKELSSLDKAAKPLDFIGSGVTTDPETRYTARIMLLST 1622
                              DI  S   S+L+   KP    G GV TD  TRYTARIM+LS 
Sbjct: 148  AVMQLTVIWGSCVFFGNYDISDSSTSSALENNKKPFSLTGYGVRTDDATRYTARIMILSM 207

Query: 1623 IPFIIAELPHVLGSSSGHSVATLIALVVSLSFLCIYCVYQ 1742
            IPF+I +L  ++ SSSG  V  LI+L+V+L FL +YC YQ
Sbjct: 208  IPFLILQLAKLINSSSGIRVVILISLLVTLVFLFLYCFYQ 247


>ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264164 [Vitis vinifera]
            gi|302142926|emb|CBI20221.3| unnamed protein product
            [Vitis vinifera]
          Length = 580

 Score =  177 bits (450), Expect = 6e-42
 Identities = 98/228 (42%), Positives = 131/228 (57%), Gaps = 3/228 (1%)
 Frame = +3

Query: 1068 NTNSTSELVSDGLSTHVDQTPYL---SLNPITTPVTCEPYYGFLPCAPNLWGELFLIVVY 1238
            N  S++ LVSDG+  H D +PYL   S + ++   +C+  YGF+PC     G LFLI+VY
Sbjct: 28   NRTSSTGLVSDGVHDHRDGSPYLLLRSFSAVSASDSCDQTYGFMPCTTTTVGNLFLILVY 87

Query: 1239 EFLLYLGDTYITSGSELLFRILGPGIFGASAFHILGALPGATIVLASGISGSTETAQXXX 1418
             +L++L  TY++SGSELL  +LGPG+ G     ILGALP A ++L SG+SGSTETAQ   
Sbjct: 88   GYLMFLAATYLSSGSELLLELLGPGLVGGLLLPILGALPDAMLILVSGLSGSTETAQSQV 147

Query: 1419 XXXXXXXXXXXXXXXXXXXXXXXXXXKVDISKELSSLDKAAKPLDFIGSGVTTDPETRYT 1598
                                      K D+   ++   +  K     GSGV+TD  T Y 
Sbjct: 148  SVGMGLLAGSTVMLLTIIWGTCVIVGKCDLQDSVAKDSQDTKGFSLTGSGVSTDIWTSYA 207

Query: 1599 ARIMLLSTIPFIIAELPHVLGSSSGHSVATLIALVVSLSFLCIYCVYQ 1742
            A IM++S IPFII +LP VL S+S   +A LIAL+VSL  L  YC+YQ
Sbjct: 208  AIIMVISVIPFIIVQLPQVLHSTSARRLAVLIALIVSLILLITYCLYQ 255


>ref|XP_002282948.1| PREDICTED: uncharacterized protein LOC100252144 [Vitis vinifera]
          Length = 579

 Score =  173 bits (438), Expect = 1e-40
 Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 3/228 (1%)
 Frame = +3

Query: 1068 NTNSTSELVSDGLSTHVDQTPYL---SLNPITTPVTCEPYYGFLPCAPNLWGELFLIVVY 1238
            N   +++LVSD    H + +PYL   S + ++   +C+  YGF+PC   + G LFLIVVY
Sbjct: 28   NRTLSTDLVSDDFHDHRNGSPYLLLRSFSAVSASDSCDQTYGFMPCTTTIVGNLFLIVVY 87

Query: 1239 EFLLYLGDTYITSGSELLFRILGPGIFGASAFHILGALPGATIVLASGISGSTETAQXXX 1418
             +L++L  TY++SGSELL  ILGPG+ G     ILGALP A ++L SG+SGSTETAQ   
Sbjct: 88   GYLMFLAATYLSSGSELLLEILGPGLVGGLIVPILGALPDAILILVSGLSGSTETAQSQV 147

Query: 1419 XXXXXXXXXXXXXXXXXXXXXXXXXXKVDISKELSSLDKAAKPLDFIGSGVTTDPETRYT 1598
                                      K D+   ++   +  K     GSGV+TD  T Y 
Sbjct: 148  SVGMGLLAGSTVILLTIMWGSCVIVGKCDLQDSVAKDLQDTKGFSLTGSGVSTDIWTSYA 207

Query: 1599 ARIMLLSTIPFIIAELPHVLGSSSGHSVATLIALVVSLSFLCIYCVYQ 1742
            A IM++S IPFII +LP VL S+S   +A LIAL+VSL  L  YC+YQ
Sbjct: 208  AIIMVISVIPFIIVQLPQVLHSTSARRLAVLIALIVSLILLITYCLYQ 255


>ref|XP_004146032.1| PREDICTED: uncharacterized protein LOC101209298 isoform 1 [Cucumis
            sativus] gi|449507105|ref|XP_004162934.1| PREDICTED:
            uncharacterized protein LOC101229160 isoform 1 [Cucumis
            sativus]
          Length = 589

 Score =  168 bits (426), Expect = 4e-39
 Identities = 94/235 (40%), Positives = 135/235 (57%), Gaps = 5/235 (2%)
 Frame = +3

Query: 1053 SSRFINTNSTSELVSDGLSTHVDQTPYLSLNPITT-----PVTCEPYYGFLPCAPNLWGE 1217
            SS   +++S+S+LVSDG++  + +  YL LN +++       +CE  YGFLPC     G 
Sbjct: 30   SSITSSSSSSSDLVSDGING-LQEPSYLHLNTLSSLSAPEEESCEQSYGFLPCTTTALGN 88

Query: 1218 LFLIVVYEFLLYLGDTYITSGSELLFRILGPGIFGASAFHILGALPGATIVLASGISGST 1397
            LFLI+VY +L++L  TY+++GSELL  ILGPGI G      LGALP A ++L SG++GS 
Sbjct: 89   LFLIIVYGYLMFLAATYLSTGSELLLEILGPGIVGGLFLPALGALPDAMLILVSGLAGSA 148

Query: 1398 ETAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDISKELSSLDKAAKPLDFIGSGVTT 1577
            E AQ                             K D+   ++   +  K      SGV+T
Sbjct: 149  EVAQSQVSVGMGLLAGSTVMLLTLIWGTCVIVGKCDLQDSVAIDSQDTKGFSLTESGVST 208

Query: 1578 DPETRYTARIMLLSTIPFIIAELPHVLGSSSGHSVATLIALVVSLSFLCIYCVYQ 1742
            D  T Y ARIM++S +PF+I +LP +L S+SG  +A LIAL++S+S   IYC+YQ
Sbjct: 209  DIWTSYAARIMVISVVPFLIVQLPQMLNSTSGRHLAVLIALIISVSMFIIYCLYQ 263


>ref|XP_002298903.1| predicted protein [Populus trichocarpa] gi|222846161|gb|EEE83708.1|
            predicted protein [Populus trichocarpa]
          Length = 591

 Score =  162 bits (409), Expect = 3e-37
 Identities = 97/227 (42%), Positives = 132/227 (58%), Gaps = 7/227 (3%)
 Frame = +3

Query: 1083 SELVSDGLSTH--VDQT---PYLSLNPITTPVTCEPYYGFLPCAPNLWGELFLIVVYEFL 1247
            S+L+SDG+  +  ++QT   P+      +   TCE  YGFLPC   + G LFLI+VY +L
Sbjct: 38   SDLISDGVLNNQSLNQTTSSPFHLALKSSAEETCEQTYGFLPCTTTVIGNLFLILVYGYL 97

Query: 1248 LYLGDTYITSGSELLFRILGPGIFGASAFHILGALPGATIVLASGISGSTETAQXXXXXX 1427
            ++   TY++SGSELL +ILGPGI G     +LGALP A ++L SG+SGSTETAQ      
Sbjct: 98   MFFAATYLSSGSELLLQILGPGIIGGLFLPVLGALPDALLILVSGLSGSTETAQSQVSVG 157

Query: 1428 XXXXXXXXXXXXXXXXXXXXXXXKVDISK-ELSSLD-KAAKPLDFIGSGVTTDPETRYTA 1601
                                   K D+S+ E S++D K  K     GSGV+TD  T Y A
Sbjct: 158  MGLLAGSTVMLLTVIWGSCVVVGKCDMSETENSAIDRKDTKRFSLTGSGVSTDIWTCYAA 217

Query: 1602 RIMLLSTIPFIIAELPHVLGSSSGHSVATLIALVVSLSFLCIYCVYQ 1742
            RIM +S +PFI+ +L   L S+SG  +A LI L++SL+ L  YC+YQ
Sbjct: 218  RIMAISILPFIVVQLLQTLHSTSGKHLAVLIGLILSLAILISYCLYQ 264


Top