BLASTX nr result
ID: Coptis25_contig00001791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001791
(1154 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera] 482 e-134
ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44... 481 e-133
ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|2... 449 e-124
ref|XP_002309282.1| f-box family protein [Populus trichocarpa] g... 441 e-121
ref|XP_002304005.1| f-box family protein [Populus trichocarpa] g... 438 e-120
>emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]
Length = 343
Score = 482 bits (1240), Expect = e-134
Identities = 226/340 (66%), Positives = 270/340 (79%), Gaps = 1/340 (0%)
Frame = -1
Query: 1112 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 933
E+IP LPE+I EC TRL YT+HRVA++VC +W LLQ KEFYY RK+ G THK ACLV
Sbjct: 6 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYXRKQTGFTHKAACLVQ 65
Query: 932 SLPSQTGSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQVSSVEGKLV 753
+LP + SDGRK PS YGI VFD V+ W ++ P+PKYP+GLPLFCQV+S EGKLV
Sbjct: 66 ALPVLSESDGRKPVRPPS--YGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLV 123
Query: 752 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 573
VMGGWDP S+DPV VFVYDF T+RW QG DMPSKRSFFAA +GR+++AGGHD+SKNA
Sbjct: 124 VMGGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNA 183
Query: 572 LKSAWVYSVREDEWNELTELSEERDECQGLIVGNEFWVVSGYGTERQGIFEESVESFELE 393
L +AWVY VR DEW+ELT +S+ERDECQG+++G+EFWVVSGYGTE QG F +S ES +LE
Sbjct: 184 LSTAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLE 243
Query: 392 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 213
T +W RV+ W N+CPR CVGV KDG L SWA+ D+ V VGACAVDLGD T +TGSAYQ
Sbjct: 244 TGRWSRVDEAWGTNQCPRSCVGVGKDGKLFSWAESDTAVGVGACAVDLGDWTLLTGSAYQ 303
Query: 212 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 96
GA QGFFLV+ K+G+ KLE++ V + FSGFVQSGCCVEI
Sbjct: 304 GAPQGFFLVERKEGQNGKLERIEVGDGFSGFVQSGCCVEI 343
>ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44130 [Vitis vinifera]
Length = 355
Score = 481 bits (1239), Expect = e-133
Identities = 226/340 (66%), Positives = 270/340 (79%), Gaps = 1/340 (0%)
Frame = -1
Query: 1112 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 933
E+IP LPE+I EC TRL YT+HRVA++VC +W LLQ KEFYY RK+ G THK ACLV
Sbjct: 18 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYLRKQTGFTHKAACLVQ 77
Query: 932 SLPSQTGSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQVSSVEGKLV 753
+LP + SDGRK PS YGI VFD V+ W ++ P+PKYP+GLPLFCQV+S EGKLV
Sbjct: 78 ALPVLSESDGRKPVRPPS--YGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLV 135
Query: 752 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 573
VMGGWDP S+DPV VFVYDF T+RW QG DMPSKRSFFAA +GR+++AGGHD+SKNA
Sbjct: 136 VMGGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNA 195
Query: 572 LKSAWVYSVREDEWNELTELSEERDECQGLIVGNEFWVVSGYGTERQGIFEESVESFELE 393
L +AWVY VR DEW+ELT +S+ERDECQG+++G+EFWVVSGYGTE QG F +S ES +LE
Sbjct: 196 LSTAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLE 255
Query: 392 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 213
T +W RV+ W N+CPR CVGV KDG L SWA+ D+ V VGACAVDLGD T +TGSAYQ
Sbjct: 256 TGRWSRVDEAWGTNQCPRSCVGVGKDGKLFSWAESDTAVGVGACAVDLGDWTLLTGSAYQ 315
Query: 212 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 96
GA QGFFLV+ K+G+ KLE++ V + FSGFVQSGCCVEI
Sbjct: 316 GAPQGFFLVERKEGQNGKLERIEVGDGFSGFVQSGCCVEI 355
>ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|222844899|gb|EEE82446.1|
predicted protein [Populus trichocarpa]
Length = 345
Score = 449 bits (1156), Expect = e-124
Identities = 206/340 (60%), Positives = 257/340 (75%), Gaps = 1/340 (0%)
Frame = -1
Query: 1112 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 933
E IP LP+++G EC+TRL YT HRVAS+VC QWR LL+SK+FYY RKK G THKVACLV
Sbjct: 8 EFIPSLPQELGLECMTRLPYTAHRVASQVCKQWRELLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 932 SLPSQTGSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQVSSVEGKLV 753
+ S G K SPS +GI VFD V+ W +L+P+PKYPNGLPLFCQ++S EGKLV
Sbjct: 68 AAHRADVSQGSKPGNSPS--FGITVFDSVSQTWQRLDPVPKYPNGLPLFCQLASCEGKLV 125
Query: 752 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 573
VMGGWDPVS++ VSHVFVYDF T++W +G +MPSKRSFFA A+ GR+Y+ GGHDE+KNA
Sbjct: 126 VMGGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGAYSGRIYVVGGHDENKNA 185
Query: 572 LKSAWVYSVREDEWNELTELSEERDECQGLIVGNEFWVVSGYGTERQGIFEESVESFELE 393
LK+ WVY + ++EW EL ++S+ERDEC+G+++G+EFW VSGY T+ QG FEES E +E
Sbjct: 186 LKTGWVYDLSKEEWTELNQMSQERDECEGVVIGDEFWAVSGYRTDNQGEFEESAEVYEFR 245
Query: 392 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 213
+ QW+RV+ W RCPR VG KDG LMSWADLD VRV + G V GS
Sbjct: 246 SGQWRRVKEAWIPGRCPRSSVGAGKDGRLMSWADLDPAVRVAVRGIMFGFRVMVAGSDSP 305
Query: 212 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 96
GA QGF++V++K G+ +LE++NVP EFSGFVQSGCCVEI
Sbjct: 306 GAPQGFYMVEMKDGQNGQLEKINVPEEFSGFVQSGCCVEI 345
>ref|XP_002309282.1| f-box family protein [Populus trichocarpa]
gi|222855258|gb|EEE92805.1| f-box family protein [Populus
trichocarpa]
Length = 337
Score = 441 bits (1135), Expect = e-121
Identities = 201/339 (59%), Positives = 260/339 (76%)
Frame = -1
Query: 1112 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 933
E+IP LP++I ECL RL YTTHRVAS+VC +WR +LQS++FYYQRK+ G THK ACL+
Sbjct: 3 ELIPSLPDEIALECLFRLHYTTHRVASQVCKRWRPVLQSRDFYYQRKQNGLTHKAACLIQ 62
Query: 932 SLPSQTGSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQVSSVEGKLV 753
++P Q GS K G P YG+ +FD VN +W +++P+P YP+GLPLFCQV+S EGKLV
Sbjct: 63 AIPDQNGSSQPKPIGPPK--YGVSIFDSVNGSWDRVDPVPAYPDGLPLFCQVTSSEGKLV 120
Query: 752 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 573
++GGWDPV ++P+S VFVY+F T++W +G DMP RSFFA +GR+ IAGGHDE+KNA
Sbjct: 121 LLGGWDPVKYEPLSQVFVYEFTTRQWRRGKDMPENRSFFAVGELNGRIIIAGGHDENKNA 180
Query: 572 LKSAWVYSVREDEWNELTELSEERDECQGLIVGNEFWVVSGYGTERQGIFEESVESFELE 393
LK+AWVY V +DEW EL ++S+ERDEC+G+++G+EFWVVSGY T+ QG FE S ES EL
Sbjct: 181 LKTAWVYDVIQDEWAELPQMSQERDECEGVVIGSEFWVVSGYRTDSQGGFEGSAESIELG 240
Query: 392 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 213
+WKRVE W ++CPR +GV D L SWA+ DS ++VGA +V LG+ TFV+GSA++
Sbjct: 241 ASKWKRVEDAWKASQCPRSSLGVGSDEKLFSWAESDSALKVGASSVHLGEKTFVSGSAHE 300
Query: 212 GATQGFFLVDVKKGEKKLEQVNVPNEFSGFVQSGCCVEI 96
G QGFFLVD + G K E++NV EF GFVQSGCCVEI
Sbjct: 301 GGPQGFFLVDGQNG--KWEKLNVTGEFCGFVQSGCCVEI 337
>ref|XP_002304005.1| f-box family protein [Populus trichocarpa]
gi|222841437|gb|EEE78984.1| f-box family protein [Populus
trichocarpa]
Length = 345
Score = 438 bits (1126), Expect = e-120
Identities = 199/340 (58%), Positives = 257/340 (75%), Gaps = 1/340 (0%)
Frame = -1
Query: 1112 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 933
E+IP LP+++G EC+TRL YT HRVAS+VC QW LL+SK+FYY RKK G THKVACLV
Sbjct: 8 ELIPSLPQELGLECMTRLPYTAHRVASQVCKQWCDLLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 932 SLPSQTGSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQVSSVEGKLV 753
++ G KQ SP +GI VFD + W +L+P+P YP LPLFCQ++S EGKLV
Sbjct: 68 AVHGADVLQGSKQGNSPC--FGISVFDSASQTWERLDPVPNYPIELPLFCQLASCEGKLV 125
Query: 752 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 573
VMGGWDPVS++ VSHVFVYDF T++W +G +MPSKRSFFA ++ GRVY+ GGHDE+KNA
Sbjct: 126 VMGGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGSYSGRVYVVGGHDENKNA 185
Query: 572 LKSAWVYSVREDEWNELTELSEERDECQGLIVGNEFWVVSGYGTERQGIFEESVESFELE 393
L++ WVY + +DEW EL ++S+ERDEC+G+++G+EFWVVSGYGT+ QG FE + E +E
Sbjct: 186 LRTGWVYDLSKDEWTELAQMSQERDECEGVVIGDEFWVVSGYGTDNQGAFEGNAEVYEFG 245
Query: 392 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 213
+ QW++V+ W RCPR CVGV KDG LMSWADLD VR G + LG +TG Q
Sbjct: 246 SGQWRQVKKAWIPGRCPRSCVGVGKDGRLMSWADLDPMVRAGVRGIPLGSRVMLTGLDNQ 305
Query: 212 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 96
G+ + F+L+++K G+ KLE++ VP+EFSGFVQSGCCVEI
Sbjct: 306 GSPEEFYLIEMKDGQNGKLEKIIVPDEFSGFVQSGCCVEI 345