BLASTX nr result

ID: Coptis25_contig00001786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001786
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634209.1| PREDICTED: ubiquitin-like protein-like [Viti...   169   4e-40
emb|CBI15587.3| unnamed protein product [Vitis vinifera]              169   4e-40
gb|ABK94223.1| unknown [Populus trichocarpa]                          159   3e-37
ref|XP_002309363.1| predicted protein [Populus trichocarpa] gi|2...   158   8e-37
ref|NP_001237412.1| uncharacterized protein LOC100499885 [Glycin...   150   1e-34

>ref|XP_003634209.1| PREDICTED: ubiquitin-like protein-like [Vitis vinifera]
          Length = 103

 Score =  169 bits (428), Expect = 4e-40
 Identities = 81/103 (78%), Positives = 92/103 (89%)
 Frame = +3

Query: 261 AMYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLAD 440
           AMYIRVKR KTTYFLQCDPTET+LD+K KL  LID+P++DQRL+LV T E+LDD+KTLAD
Sbjct: 2   AMYIRVKRSKTTYFLQCDPTETILDVKQKLHTLIDQPINDQRLILVGTGEILDDSKTLAD 61

Query: 441 QKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 569
           QKVENDAVVALTLRKDDNEFE+V I++P DDFY SRD DG SW
Sbjct: 62  QKVENDAVVALTLRKDDNEFEDVNIVRPNDDFYQSRDPDG-SW 103


>emb|CBI15587.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  169 bits (428), Expect = 4e-40
 Identities = 81/103 (78%), Positives = 92/103 (89%)
 Frame = +3

Query: 261 AMYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLAD 440
           AMYIRVKR KTTYFLQCDPTET+LD+K KL  LID+P++DQRL+LV T E+LDD+KTLAD
Sbjct: 73  AMYIRVKRSKTTYFLQCDPTETILDVKQKLHTLIDQPINDQRLILVGTGEILDDSKTLAD 132

Query: 441 QKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 569
           QKVENDAVVALTLRKDDNEFE+V I++P DDFY SRD DG SW
Sbjct: 133 QKVENDAVVALTLRKDDNEFEDVNIVRPNDDFYQSRDPDG-SW 174


>gb|ABK94223.1| unknown [Populus trichocarpa]
          Length = 103

 Score =  159 bits (403), Expect = 3e-37
 Identities = 78/103 (75%), Positives = 91/103 (88%)
 Frame = +3

Query: 261 AMYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLAD 440
           AMYIRVKR KTTYF+QCDPTE  L+IK KL  LID+PV+DQRL+LV T EVL+D+K+LA+
Sbjct: 2   AMYIRVKRNKTTYFIQCDPTEKTLEIKQKLNVLIDQPVNDQRLILVGTGEVLEDSKSLAE 61

Query: 441 QKVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 569
           QKVENDAVVALTLRKDDNEFE+V I++P DDFY SRDADG +W
Sbjct: 62  QKVENDAVVALTLRKDDNEFEDVSIVRP-DDFYQSRDADGTNW 103


>ref|XP_002309363.1| predicted protein [Populus trichocarpa] gi|222855339|gb|EEE92886.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  158 bits (399), Expect = 8e-37
 Identities = 77/102 (75%), Positives = 90/102 (88%)
 Frame = +3

Query: 264 MYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLADQ 443
           MYIRVKR KTTYF+QCDPTE  L+IK KL  LID+PV+DQRL+LV T EVL+D+K+LA+Q
Sbjct: 1   MYIRVKRNKTTYFIQCDPTEKTLEIKQKLNVLIDQPVNDQRLILVGTGEVLEDSKSLAEQ 60

Query: 444 KVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 569
           KVENDAVVALTLRKDDNEFE+V I++P DDFY SRDADG +W
Sbjct: 61  KVENDAVVALTLRKDDNEFEDVSIVRP-DDFYQSRDADGTNW 101


>ref|NP_001237412.1| uncharacterized protein LOC100499885 [Glycine max]
           gi|255627435|gb|ACU14062.1| unknown [Glycine max]
          Length = 103

 Score =  150 bits (380), Expect = 1e-34
 Identities = 72/102 (70%), Positives = 89/102 (87%)
 Frame = +3

Query: 264 MYIRVKREKTTYFLQCDPTETVLDIKHKLFGLIDKPVSDQRLVLVATAEVLDDAKTLADQ 443
           MYIRVKR KTTYF++C P++ +LDIK KL  L+D+P ++QRL+L  T EVL+D+KTLADQ
Sbjct: 3   MYIRVKRSKTTYFIRCKPSDKILDIKQKLQELVDQPANNQRLILPVTGEVLEDSKTLADQ 62

Query: 444 KVENDAVVALTLRKDDNEFEEVGILQPKDDFYHSRDADGASW 569
           KVENDAVVALTLRKDDNEFEEV I++P +DFY +RDADGA+W
Sbjct: 63  KVENDAVVALTLRKDDNEFEEVNIVRP-NDFYQARDADGANW 103


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