BLASTX nr result

ID: Coptis25_contig00001783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001783
         (1956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-co...    94   7e-27
emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]    94   7e-27
ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein ...   125   4e-26
ref|XP_002330879.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-25
ref|XP_002278217.1| PREDICTED: staphylococcal nuclease domain-co...    92   2e-25

>ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-containing protein 1 [Vitis
            vinifera] gi|296088151|emb|CBI35621.3| unnamed protein
            product [Vitis vinifera]
          Length = 1000

 Score = 94.0 bits (232), Expect(2) = 7e-27
 Identities = 44/63 (69%), Positives = 54/63 (85%)
 Frame = +2

Query: 1733 QVEVETVDRTGTYLGSMWDPKTNVVVTLLEAGLAKLQTAFGADRIADAHLLAQSNQDFFT 1912
            ++EVETVDRTGT+LGS+W+ KTN+ VTLLEAGLAKLQT+FG+DRI DAHLLAQ+ Q    
Sbjct: 651  EIEVETVDRTGTFLGSLWEAKTNMAVTLLEAGLAKLQTSFGSDRIPDAHLLAQAEQSAKK 710

Query: 1913 SKI 1921
             K+
Sbjct: 711  QKL 713



 Score = 55.1 bits (131), Expect(2) = 7e-27
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +1

Query: 1591 ISGHRFKLLIPKETCTIAFSFSDIRCP 1671
            +SGHRFKLLIPKETC+IAFSFS +RCP
Sbjct: 601  LSGHRFKLLIPKETCSIAFSFSGVRCP 627


>emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]
          Length = 983

 Score = 94.0 bits (232), Expect(2) = 7e-27
 Identities = 44/63 (69%), Positives = 54/63 (85%)
 Frame = +2

Query: 1733 QVEVETVDRTGTYLGSMWDPKTNVVVTLLEAGLAKLQTAFGADRIADAHLLAQSNQDFFT 1912
            ++EVETVDRTGT+LGS+W+ KTN+ VTLLEAGLAKLQT+FG+DRI DAHLLAQ+ Q    
Sbjct: 634  EIEVETVDRTGTFLGSLWEAKTNMAVTLLEAGLAKLQTSFGSDRIPDAHLLAQAEQSAKK 693

Query: 1913 SKI 1921
             K+
Sbjct: 694  QKL 696



 Score = 55.1 bits (131), Expect(2) = 7e-27
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +1

Query: 1591 ISGHRFKLLIPKETCTIAFSFSDIRCP 1671
            +SGHRFKLLIPKETC+IAFSFS +RCP
Sbjct: 584  LSGHRFKLLIPKETCSIAFSFSGVRCP 610


>ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
            vinifera] gi|297736200|emb|CBI24838.3| unnamed protein
            product [Vitis vinifera]
          Length = 536

 Score =  125 bits (314), Expect = 4e-26
 Identities = 60/91 (65%), Positives = 76/91 (83%)
 Frame = -1

Query: 1419 EVDTHLQKLRCKVAFEVLQFTTPIVKLGNKLAERMRSKSTYIALHLCMGNDV*TRTGCLL 1240
            ++ + LQKLRCKVAF  L+F+ PI++LGNK+AERMRSK  Y+ALHL M  DV  RTGCL 
Sbjct: 265  DLPSDLQKLRCKVAFHALRFSQPILELGNKMAERMRSKGPYLALHLRMEKDVWVRTGCLP 324

Query: 1239 GLSHKYDEIISSKRKLQPELLTTRSNMSYHD 1147
            GLS +YDEII+++RKL+PELLT RSNM+YH+
Sbjct: 325  GLSSQYDEIINNERKLRPELLTARSNMTYHE 355


>ref|XP_002330879.1| predicted protein [Populus trichocarpa] gi|222872701|gb|EEF09832.1|
            predicted protein [Populus trichocarpa]
          Length = 435

 Score =  123 bits (308), Expect = 2e-25
 Identities = 59/91 (64%), Positives = 74/91 (81%)
 Frame = -1

Query: 1419 EVDTHLQKLRCKVAFEVLQFTTPIVKLGNKLAERMRSKSTYIALHLCMGNDV*TRTGCLL 1240
            ++ + LQKLRCKVAF  L+F  P+++LGNKLAERMRSK  Y+ALHL M  DV  RTGC  
Sbjct: 167  DLPSDLQKLRCKVAFNALRFAPPVLELGNKLAERMRSKGPYLALHLRMELDVWVRTGCQP 226

Query: 1239 GLSHKYDEIISSKRKLQPELLTTRSNMSYHD 1147
            GLSH+YDEII+++RK +PELLT RSNM+YH+
Sbjct: 227  GLSHEYDEIINNERKQRPELLTARSNMTYHE 257


>ref|XP_002278217.1| PREDICTED: staphylococcal nuclease domain-containing protein 1 [Vitis
            vinifera] gi|296082235|emb|CBI21240.3| unnamed protein
            product [Vitis vinifera]
          Length = 991

 Score = 92.0 bits (227), Expect(2) = 2e-25
 Identities = 43/63 (68%), Positives = 53/63 (84%)
 Frame = +2

Query: 1733 QVEVETVDRTGTYLGSMWDPKTNVVVTLLEAGLAKLQTAFGADRIADAHLLAQSNQDFFT 1912
            ++EVETVDRTGT+LGS+W+ KTN+ V LLEAGLAKLQT FGADR+ADAHLLA++ Q    
Sbjct: 648  EIEVETVDRTGTFLGSLWESKTNMAVVLLEAGLAKLQTTFGADRMADAHLLAKAEQSAKQ 707

Query: 1913 SKI 1921
             K+
Sbjct: 708  QKL 710



 Score = 52.0 bits (123), Expect(2) = 2e-25
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +1

Query: 1591 ISGHRFKLLIPKETCTIAFSFSDIRCP 1671
            +SGHRFKLLI KETC+IAFSFS +RCP
Sbjct: 598  LSGHRFKLLISKETCSIAFSFSGVRCP 624


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