BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001781
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458416.1| hypothetical protein SORBIDRAFT_03g033090 [S...   308   1e-81
ref|NP_001151765.1| LOC100285400 [Zea mays] gi|194708402|gb|ACF8...   307   2e-81
gb|ACG35238.1| NADH-ubiquinone oxidoreductase 20 kDa subunit [Ze...   307   3e-81
ref|NP_001131270.1| NADH-ubiquinone oxidoreductase subunit [Zea ...   306   4e-81
ref|XP_002440129.1| hypothetical protein SORBIDRAFT_09g026580 [S...   305   7e-81

>ref|XP_002458416.1| hypothetical protein SORBIDRAFT_03g033090 [Sorghum bicolor]
           gi|241930391|gb|EES03536.1| hypothetical protein
           SORBIDRAFT_03g033090 [Sorghum bicolor]
          Length = 200

 Score =  308 bits (789), Expect = 1e-81
 Identities = 155/204 (75%), Positives = 164/204 (80%), Gaps = 7/204 (3%)
 Frame = -1

Query: 905 LPKTARLSQLTTQ-------IRSLSTSSPAPYXXXXXXXXXXXXPGISKTAEYVVSKVDD 747
           LP+TARL+ L+T            S++SPAPY              +SKTAE+VVSKVDD
Sbjct: 4   LPRTARLALLSTPRAYSAAAAAGASSTSPAPYGGAPPP-------AMSKTAEFVVSKVDD 56

Query: 746 LMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLTNK 567
           LMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVAGTLTNK
Sbjct: 57  LMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGTLTNK 116

Query: 566 MAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPPTAEA 387
           MAPALRKVYDQMPEPRWVISMGSCAN             GCDRIVPVDIYVPGCPPTAEA
Sbjct: 117 MAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEA 176

Query: 386 LLYGVLQLQKKINRRKDFLHWWTK 315
           LLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 177 LLYGVLQLQKKINRRKDFLHWWTK 200


>ref|NP_001151765.1| LOC100285400 [Zea mays] gi|194708402|gb|ACF88285.1| unknown [Zea
           mays] gi|195621542|gb|ACG32601.1| NADH-ubiquinone
           oxidoreductase 20 kDa subunit [Zea mays]
           gi|195649579|gb|ACG44257.1| NADH-ubiquinone
           oxidoreductase 20 kDa subunit [Zea mays]
           gi|413951110|gb|AFW83759.1| NADH-ubiquinone
           oxidoreductase subunit [Zea mays]
           gi|413951113|gb|AFW83762.1| NADH-ubiquinone
           oxidoreductase subunit [Zea mays]
          Length = 200

 Score =  307 bits (787), Expect = 2e-81
 Identities = 155/204 (75%), Positives = 163/204 (79%), Gaps = 7/204 (3%)
 Frame = -1

Query: 905 LPKTARLSQLTTQ-------IRSLSTSSPAPYXXXXXXXXXXXXPGISKTAEYVVSKVDD 747
           LP+TARL+ L+T            S +SPAPY              +SKTAE+VVSKVDD
Sbjct: 4   LPRTARLALLSTPRAYSAAAAAGASPTSPAPYGGAPPP-------AMSKTAEFVVSKVDD 56

Query: 746 LMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLTNK 567
           LMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVAGTLTNK
Sbjct: 57  LMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGTLTNK 116

Query: 566 MAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPPTAEA 387
           MAPALRKVYDQMPEPRWVISMGSCAN             GCDRIVPVDIYVPGCPPTAEA
Sbjct: 117 MAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEA 176

Query: 386 LLYGVLQLQKKINRRKDFLHWWTK 315
           LLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 177 LLYGVLQLQKKINRRKDFLHWWTK 200


>gb|ACG35238.1| NADH-ubiquinone oxidoreductase 20 kDa subunit [Zea mays]
          Length = 200

 Score =  307 bits (786), Expect = 3e-81
 Identities = 155/204 (75%), Positives = 163/204 (79%), Gaps = 7/204 (3%)
 Frame = -1

Query: 905 LPKTARLSQLTTQ-------IRSLSTSSPAPYXXXXXXXXXXXXPGISKTAEYVVSKVDD 747
           LP+TARL+ L+T            S +SPAPY              +SKTAE+VVSKVDD
Sbjct: 4   LPRTARLAFLSTPRSYSAAAAAGASPTSPAPYGGAPPP-------AMSKTAEFVVSKVDD 56

Query: 746 LMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLTNK 567
           LMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVAGTLTNK
Sbjct: 57  LMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGTLTNK 116

Query: 566 MAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPPTAEA 387
           MAPALRKVYDQMPEPRWVISMGSCAN             GCDRIVPVDIYVPGCPPTAEA
Sbjct: 117 MAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEA 176

Query: 386 LLYGVLQLQKKINRRKDFLHWWTK 315
           LLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 177 LLYGVLQLQKKINRRKDFLHWWTK 200


>ref|NP_001131270.1| NADH-ubiquinone oxidoreductase subunit [Zea mays]
           gi|194691040|gb|ACF79604.1| unknown [Zea mays]
           gi|195641534|gb|ACG40235.1| NADH-ubiquinone
           oxidoreductase 20 kDa subunit [Zea mays]
           gi|414880711|tpg|DAA57842.1| TPA: NADH-ubiquinone
           oxidoreductase subunit [Zea mays]
          Length = 202

 Score =  306 bits (784), Expect = 4e-81
 Identities = 155/206 (75%), Positives = 163/206 (79%), Gaps = 9/206 (4%)
 Frame = -1

Query: 905 LPKTARLSQLTTQ---------IRSLSTSSPAPYXXXXXXXXXXXXPGISKTAEYVVSKV 753
           LP+TARL+ L+T              S +SPAPY              +SKTAE+VVSKV
Sbjct: 4   LPRTARLAFLSTPRSYSAAAAAAAGASPTSPAPYGGAPPP-------AMSKTAEFVVSKV 56

Query: 752 DDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLT 573
           DDLMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVAGTLT
Sbjct: 57  DDLMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGTLT 116

Query: 572 NKMAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPPTA 393
           NKMAPALRKVYDQMPEPRWVISMGSCAN             GCDRIVPVDIYVPGCPPTA
Sbjct: 117 NKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTA 176

Query: 392 EALLYGVLQLQKKINRRKDFLHWWTK 315
           EALLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 177 EALLYGVLQLQKKINRRKDFLHWWTK 202


>ref|XP_002440129.1| hypothetical protein SORBIDRAFT_09g026580 [Sorghum bicolor]
           gi|241945414|gb|EES18559.1| hypothetical protein
           SORBIDRAFT_09g026580 [Sorghum bicolor]
          Length = 202

 Score =  305 bits (782), Expect = 7e-81
 Identities = 154/203 (75%), Positives = 162/203 (79%), Gaps = 6/203 (2%)
 Frame = -1

Query: 905 LPKTARLSQLTTQIRSLSTSS------PAPYXXXXXXXXXXXXPGISKTAEYVVSKVDDL 744
           LP+TARL+ L    R+ S+SS      PAPY               SK AE+VVSKVDDL
Sbjct: 4   LPRTARLALLPASSRAYSSSSAAGSPRPAPYGGAAPLPPALA----SKAAEFVVSKVDDL 59

Query: 743 MNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLTNKM 564
           MNWARRGSIWPMTFGLACCAVEMMHAGA+RYDFDRFG+IFRPSPRQSDCMIVAGTLTNKM
Sbjct: 60  MNWARRGSIWPMTFGLACCAVEMMHAGASRYDFDRFGLIFRPSPRQSDCMIVAGTLTNKM 119

Query: 563 APALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPPTAEAL 384
           APALR+VYDQMPEPRWVISMGSCAN             GCDRIVPVDIYVPGCPPTAEAL
Sbjct: 120 APALRRVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL 179

Query: 383 LYGVLQLQKKINRRKDFLHWWTK 315
           LYGVLQLQKKINRRKDFLHWWTK
Sbjct: 180 LYGVLQLQKKINRRKDFLHWWTK 202