BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001776
         (2132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-...   372   e-100
ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-...   372   e-100
ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [...   340   9e-91
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-...   339   2e-90
ref|XP_002882196.1| hypothetical protein ARALYDRAFT_317076 [Arab...   338   3e-90

>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 735

 Score =  372 bits (956), Expect = e-100
 Identities = 218/441 (49%), Positives = 265/441 (60%), Gaps = 8/441 (1%)
 Frame = +1

Query: 832  THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 1011
            THRLA+VN+DW  V+AVDLYVVLSSFLPKGGQ+LSV VYPSEFGL+RM+EE + GPVGLF
Sbjct: 206  THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 265

Query: 1012 XXXXXXXXXXXXXX-----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 1176
                               +D EKLRAYE+SRLRYY+AV ECDS ATAD++YK CDG+EF
Sbjct: 266  DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 325

Query: 1177 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1353
            ERSSN+LDLRF+PD+M+FE  PRD ATE P +Y V++F T ALQ S I L+WDEDEP R 
Sbjct: 326  ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 385

Query: 1354 KALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRAL 1533
            KAL+R F   QL +L++  F+A+DES S         +    GE Q  +   K +KYRAL
Sbjct: 386  KALKRKFNADQLADLELKEFLASDESESD--------DESDDGEDQVDKKRKKGDKYRAL 437

Query: 1534 IQAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIAR 1713
            +Q+              MEVTFNTGLEDISK ILEKK DKKSET+WEA LRK+ EK++A 
Sbjct: 438  LQSDEDGEQDGGQD---MEVTFNTGLEDISKRILEKK-DKKSETLWEAHLRKKHEKRMAS 493

Query: 1714 KNRYLXXXXXXXXXXXXXXQP-DDFFVEE-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1887
            +N+                +  DDFFVEE P                             
Sbjct: 494  RNKSANSSDDESSDTDREVEEVDDFFVEEPPVKESGKDRTKNIKGREHVGEDGAAEASRA 553

Query: 1888 XXXXXXXXXXXXXPTMRGYXXXXXXXXXXXXXXXXXXXXXDPAEDKLPSVACDDPRFSAL 2067
                          +++GY                     D  EDK+P+V  +DPRFSAL
Sbjct: 554  ELELLLADDDGVDTSIKGYNLKHKKKKGKE----------DITEDKIPTVDYNDPRFSAL 603

Query: 2068 FSSPLFALDPTDAQYKRSAAY 2130
            F+SPLFALDPTD Q+KRSAAY
Sbjct: 604  FNSPLFALDPTDPQFKRSAAY 624



 Score =  100 bits (249), Expect = 2e-18
 Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = +1

Query: 379 IKNDG--RKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHIDKR 552
           I ND   +K+I D RFS+VH DPRFQN PKH++KV IDSRFN+MF DK F+++S+ +DKR
Sbjct: 31  INNDQSKKKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKR 90

Query: 553 GKRKDKNAVNPLRHYYKIDQQ 615
           G+ K   + NPLR YYKI+++
Sbjct: 91  GRVKKGKSENPLRRYYKIEEK 111


>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 740

 Score =  372 bits (956), Expect = e-100
 Identities = 218/441 (49%), Positives = 265/441 (60%), Gaps = 8/441 (1%)
 Frame = +1

Query: 832  THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 1011
            THRLA+VN+DW  V+AVDLYVVLSSFLPKGGQ+LSV VYPSEFGL+RM+EE + GPVGLF
Sbjct: 211  THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 270

Query: 1012 XXXXXXXXXXXXXX-----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 1176
                               +D EKLRAYE+SRLRYY+AV ECDS ATAD++YK CDG+EF
Sbjct: 271  DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 330

Query: 1177 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1353
            ERSSN+LDLRF+PD+M+FE  PRD ATE P +Y V++F T ALQ S I L+WDEDEP R 
Sbjct: 331  ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 390

Query: 1354 KALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRAL 1533
            KAL+R F   QL +L++  F+A+DES S         +    GE Q  +   K +KYRAL
Sbjct: 391  KALKRKFNADQLADLELKEFLASDESESD--------DESDDGEDQVDKKRKKGDKYRAL 442

Query: 1534 IQAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIAR 1713
            +Q+              MEVTFNTGLEDISK ILEKK DKKSET+WEA LRK+ EK++A 
Sbjct: 443  LQSDEDGEQDGGQD---MEVTFNTGLEDISKRILEKK-DKKSETLWEAHLRKKHEKRMAS 498

Query: 1714 KNRYLXXXXXXXXXXXXXXQP-DDFFVEE-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1887
            +N+                +  DDFFVEE P                             
Sbjct: 499  RNKSADSSDDESSDTDREVEEVDDFFVEEPPVKESGKDRTKNIKGREHVGEDGAAEASRA 558

Query: 1888 XXXXXXXXXXXXXPTMRGYXXXXXXXXXXXXXXXXXXXXXDPAEDKLPSVACDDPRFSAL 2067
                          +++GY                     D  EDK+P+V  +DPRFSAL
Sbjct: 559  ELELLLADDDGVDTSIKGYNLKHKKKKGKE----------DITEDKIPTVDYNDPRFSAL 608

Query: 2068 FSSPLFALDPTDAQYKRSAAY 2130
            F+SPLFALDPTD Q+KRSAAY
Sbjct: 609  FNSPLFALDPTDPQFKRSAAY 629



 Score =  100 bits (249), Expect = 2e-18
 Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = +1

Query: 379 IKNDG--RKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHIDKR 552
           I ND   +K+I D RFS+VH DPRFQN PKH++KV IDSRFN+MF DK F+++S+ +DKR
Sbjct: 35  INNDQSKKKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKR 94

Query: 553 GKRKDKNAVNPLRHYYKIDQQ 615
           G+ K   + NPLR YYKI+++
Sbjct: 95  GRVKKGKSENPLRRYYKIEEK 115


>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
            gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
            ESF1, putative [Ricinus communis]
          Length = 722

 Score =  340 bits (872), Expect = 9e-91
 Identities = 186/330 (56%), Positives = 223/330 (67%), Gaps = 7/330 (2%)
 Frame = +1

Query: 832  THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 1011
            THRLA+VN+DW  VRAVDLYVVL SFLPKGG +LSV VYPSEFGL+RMEEE + GPVGLF
Sbjct: 188  THRLAVVNLDWRHVRAVDLYVVLRSFLPKGGDILSVAVYPSEFGLQRMEEEELHGPVGLF 247

Query: 1012 XXXXXXXXXXXXXX----IDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEFE 1179
                              ID+EKLRAYE SRLRYY+AV ECDS ATA+H+YKACDG+EFE
Sbjct: 248  DDEKKKNDEDEDEDEDDEIDEEKLRAYEKSRLRYYYAVVECDSVATAEHLYKACDGVEFE 307

Query: 1180 RSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR-K 1356
            RSSNV DLRFVPD+M+F+  PRD+A E P +Y  +DF T+ALQ SNI ++WDEDEP R K
Sbjct: 308  RSSNVFDLRFVPDSMEFKHPPRDIAKEAPTSYEGLDFHTKALQHSNIPISWDEDEPQRVK 367

Query: 1357 ALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRALI 1536
             L+R FT  QL E+++  F+A+D S S          +D   EG++     K +KYRALI
Sbjct: 368  TLKRKFTADQLAEMELQEFLASDGSESDDDG------NDDNAEGEADRKEKKRDKYRALI 421

Query: 1537 QAXXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIARK 1716
            Q+              ME+TFNTGLE +SK ILE K+DKKSETVWEA LRK++EKK ARK
Sbjct: 422  QSGDGSDGEDEEEGQEMEITFNTGLEGLSKRILE-KRDKKSETVWEAHLRKQQEKKKARK 480

Query: 1717 NR--YLXXXXXXXXXXXXXXQPDDFFVEEP 1800
             R  Y               + +DFFVEEP
Sbjct: 481  KRSKYSSEDESSDADEEMIEEANDFFVEEP 510



 Score =  100 bits (249), Expect = 2e-18
 Identities = 43/76 (56%), Positives = 64/76 (84%)
 Frame = +1

Query: 391 GRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHIDKRGKRKDK 570
           GR+++EDPRF+++H DPRFQ VPK ++KV IDSRF+RMF+DK+F +SS+ +D RGK K +
Sbjct: 38  GRELMEDPRFASIHTDPRFQKVPKQRTKVEIDSRFSRMFTDKSFGSSSAPLDSRGKAKKQ 97

Query: 571 NAVNPLRHYYKIDQQK 618
           N+ + LRHYY I++++
Sbjct: 98  NSESFLRHYYHIEEEE 113



 Score = 68.6 bits (166), Expect = 7e-09
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = +1

Query: 2011 PAEDKLPSVACDDPRFSALFSSPLFALDPTDAQYKRSAAY 2130
            P E+KLP+V  DDPRFSALF+SPLFALDPTD Q+KRSAAY
Sbjct: 577  PDENKLPTVDYDDPRFSALFNSPLFALDPTDPQFKRSAAY 616


>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
          Length = 726

 Score =  339 bits (869), Expect = 2e-90
 Identities = 180/325 (55%), Positives = 219/325 (67%), Gaps = 3/325 (0%)
 Frame = +1

Query: 832  THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPVGLF 1011
            THRLA+VNM+W QV+AVDL++VLSSFLPK G +LSV +YPSEFGLKRMEEEAV GP+GLF
Sbjct: 186  THRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLF 245

Query: 1012 XXXXXXXXXXXXXXIDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEFERSSN 1191
                          ID EKLRAYE SRL YY+AV +CDSSATAD++YKACDG+EFERSSN
Sbjct: 246  DDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSN 305

Query: 1192 VLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR-KALRR 1368
            VLDLRF+PD+M+F+  P D+ATE P  Y  +DF T+ALQ S I ++WDEDEP R K L+R
Sbjct: 306  VLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKR 365

Query: 1369 NFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEGQSGENLGKLEKYRALIQAXX 1548
             + D ++ EL +  F+A+D   S           D   + QS +   +  KY AL+++  
Sbjct: 366  KYNDDEVAELAMKEFLASDTDES--------ETDDNENDDQSDKEHKRQNKYLALLESGD 417

Query: 1549 XXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKEKKIARKNR-- 1722
                        MEVTFNTGLEDISK ILE K++KKSETVWEA L+KR EK+ ARKNR  
Sbjct: 418  GSDRDDEEDGQDMEVTFNTGLEDISKRILE-KREKKSETVWEAYLKKRSEKRKARKNRSK 476

Query: 1723 YLXXXXXXXXXXXXXXQPDDFFVEE 1797
            Y               QPDDFFVEE
Sbjct: 477  YSSEDESDDTDQELMEQPDDFFVEE 501



 Score =  102 bits (255), Expect = 3e-19
 Identities = 47/84 (55%), Positives = 64/84 (76%)
 Frame = +1

Query: 367 QDNNIKNDGRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFATSSSHID 546
           +D   KN G K++ D RFS++H DPRFQ VPKH++KV IDSRFNRMF DK+F +SS+ +D
Sbjct: 26  EDRRSKNGG-KIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLD 84

Query: 547 KRGKRKDKNAVNPLRHYYKIDQQK 618
           KRGK K   + N L HYY++++Q+
Sbjct: 85  KRGKPKKDRSGNTLSHYYRLEEQE 108



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +1

Query: 2011 PAEDKLPSVACDDPRFSALFSSPLFALDPTDAQYKRSAAY 2130
            P EDK+P+V  DDPRFS+LF+SPLFALDPTD Q+KRSA Y
Sbjct: 570  PDEDKIPAVDYDDPRFSSLFTSPLFALDPTDPQFKRSATY 609


>ref|XP_002882196.1| hypothetical protein ARALYDRAFT_317076 [Arabidopsis lyrata subsp.
            lyrata] gi|297328036|gb|EFH58455.1| hypothetical protein
            ARALYDRAFT_317076 [Arabidopsis lyrata subsp. lyrata]
          Length = 725

 Score =  338 bits (868), Expect = 3e-90
 Identities = 206/452 (45%), Positives = 256/452 (56%), Gaps = 19/452 (4%)
 Frame = +1

Query: 832  THRLAIVNMDWSQVRAVDLYVVLSSFLPKGGQLLSVTVYPSEFGLKRMEEEAVKGPV--- 1002
            THRLAIVNMDW  V A DLYVVL+SFLPK G++LSV VYPSEFGL+RM+EE + GPV   
Sbjct: 206  THRLAIVNMDWRHVSAKDLYVVLNSFLPKDGRILSVAVYPSEFGLERMKEEEIHGPVIDG 265

Query: 1003 --GLFXXXXXXXXXXXXXXIDKEKLRAYELSRLRYYHAVAECDSSATADHIYKACDGLEF 1176
                               +  +KLRAYE+SRL+YY AVAECDSSATADH+YK+CDG+EF
Sbjct: 266  DKKNEGSDDEDEEEEEDEDVINQKLRAYEISRLKYYFAVAECDSSATADHLYKSCDGIEF 325

Query: 1177 ERSSNVLDLRFVPDTMQFERSPRDVATEVPENYNVVDFKTQALQQSNIRLTWDEDEPNR- 1353
            ERSSN LDLRF+PD+M+F+  PRD+A+E P  Y  +DF+++ALQ S + L+WDEDEP+R 
Sbjct: 326  ERSSNKLDLRFIPDSMEFKHPPRDIASEAPAGYEGLDFQSRALQLSKVNLSWDEDEPHRI 385

Query: 1354 KALRRNFTDKQLDELDINNFIATDESGSXXXXXXXXXEHDVAGEG--QSGENLGK-LEKY 1524
            K L + F  +QL  L++  F+A+DES S         E D + EG  QS     K  +KY
Sbjct: 386  KTLNQKFNPEQLANLEMKEFLASDESDS-------DDEDDDSKEGINQSKRKEDKRKDKY 438

Query: 1525 RALIQA--XXXXXXXXXXXXXXMEVTFNTGLEDISKHILEKKKDKKSETVWEAVLRKRKE 1698
            RALI++                MEVTFNTGLED+SK IL KKKD KSE+VWE  LR+R+E
Sbjct: 439  RALIESEDVDSDKDMEEEDGQDMEVTFNTGLEDLSKEIL-KKKDSKSESVWETYLRQRRE 497

Query: 1699 KKIARKNRYLXXXXXXXXXXXXXXQ--------PDDFFVEEPXXXXXXXXXXXXXXXXXX 1854
            KK ARKN+                          DDFF+EEP                  
Sbjct: 498  KKRARKNKQNDDSSSPDDDDDYKIDRKAVKDDGDDDFFMEEPPLKKKKKEGKTKKKGLEE 557

Query: 1855 XXXXXXXXXXXXXXXXXXXXXXXXPTMRGYXXXXXXXXXXXXXXXXXXXXXDPAEDKLPS 2034
                                      ++GY                     D +E+K+P+
Sbjct: 558  EVAAEEKSRAELELLLADENAGDGNGLKGY----------NIKRKGKKGKTDISEEKIPA 607

Query: 2035 VACDDPRFSALFSSPLFALDPTDAQYKRSAAY 2130
               DDPRFSALFSSP +ALDPTD Q+KRSA Y
Sbjct: 608  ADLDDPRFSALFSSPFYALDPTDPQFKRSATY 639



 Score = 84.0 bits (206), Expect = 2e-13
 Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = +1

Query: 349 EAKTSLQDNNIKNDGRKVIEDPRFSTVHFDPRFQNVPKHQSKVPIDSRFNRMFSDKNFAT 528
           EAK S     + ++G ++I+DPRFS+ H DP+F+ + +  SKV IDSRF RMF+DK F T
Sbjct: 15  EAKGS---GGVADEGNEMIKDPRFSSAHTDPKFRRIRRRDSKVAIDSRFQRMFNDKRFTT 71

Query: 529 SSSHIDKRGK-RKDKNAVNPLRHYYKI 606
           +S+ +DKRGK R+  +  + LR +Y+I
Sbjct: 72  ASAPVDKRGKRRRGGSGKDSLREFYRI 98