BLASTX nr result

ID: Coptis25_contig00001766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001766
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283211.1| PREDICTED: DAG protein, chloroplastic isofor...   100   9e-20
ref|XP_004151975.1| PREDICTED: DAG protein, chloroplastic-like [...    98   6e-19
gb|AFW57409.1| hypothetical protein ZEAMMB73_570539 [Zea mays]         97   2e-18
ref|XP_003573360.1| PREDICTED: DAG protein, chloroplastic-like [...    97   2e-18
dbj|BAJ99034.1| predicted protein [Hordeum vulgare subsp. vulgar...    97   2e-18

>ref|XP_002283211.1| PREDICTED: DAG protein, chloroplastic isoform 1 [Vitis vinifera]
           gi|359493924|ref|XP_003634693.1| PREDICTED: DAG protein,
           chloroplastic isoform 2 [Vitis vinifera]
          Length = 229

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/105 (53%), Positives = 62/105 (59%)
 Frame = -3

Query: 315 VSSTRTCVRTAAAAMDXXXXXXXXXXXSEPRETILLPGCDYNHXXXXXXXXXXXXXXXXX 136
           ++S    VR   AA+            +EPRETI+LPGCDYNH                 
Sbjct: 43  LTSRSGAVRPIRAAVSDGEYSSKRSSSNEPRETIMLPGCDYNH----------------- 85

Query: 135 XXXDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVVGSMEEAKK 1
                  WLIVMEFPKDPAPTREQMIDTYLNTLATV+GSMEEAKK
Sbjct: 86  -------WLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKK 123


>ref|XP_004151975.1| PREDICTED: DAG protein, chloroplastic-like [Cucumis sativus]
          Length = 230

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 59/107 (55%), Positives = 63/107 (58%)
 Frame = -3

Query: 321 HSVSSTRTCVRTAAAAMDXXXXXXXXXXXSEPRETILLPGCDYNHXXXXXXXXXXXXXXX 142
           HS S +R  VR   AA+D            E RETI+LPGCDYNH               
Sbjct: 46  HSGSQSRVLVR---AALDSDYSSKRSSSN-EQRETIMLPGCDYNH--------------- 86

Query: 141 XXXXXDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVVGSMEEAKK 1
                    WLIVMEFPKDPAPTREQMIDTYLNTLATV+GSMEEAKK
Sbjct: 87  ---------WLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKK 124


>gb|AFW57409.1| hypothetical protein ZEAMMB73_570539 [Zea mays]
          Length = 175

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/77 (66%), Positives = 52/77 (67%)
 Frame = -3

Query: 231 EPRETILLPGCDYNHXXXXXXXXXXXXXXXXXXXXDYNHWLIVMEFPKDPAPTREQMIDT 52
           E RETILLPGCDYNH                        WLIVMEFPKDPAPTREQMIDT
Sbjct: 62  EERETILLPGCDYNH------------------------WLIVMEFPKDPAPTREQMIDT 97

Query: 51  YLNTLATVVGSMEEAKK 1
           YLNTLATV+GSMEEAKK
Sbjct: 98  YLNTLATVLGSMEEAKK 114


>ref|XP_003573360.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
           distachyon]
          Length = 229

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/77 (66%), Positives = 52/77 (67%)
 Frame = -3

Query: 231 EPRETILLPGCDYNHXXXXXXXXXXXXXXXXXXXXDYNHWLIVMEFPKDPAPTREQMIDT 52
           E RETILLPGCDYNH                        WLIVMEFPKDPAPTREQMIDT
Sbjct: 72  EQRETILLPGCDYNH------------------------WLIVMEFPKDPAPTREQMIDT 107

Query: 51  YLNTLATVVGSMEEAKK 1
           YLNTLATV+GSMEEAKK
Sbjct: 108 YLNTLATVLGSMEEAKK 124


>dbj|BAJ99034.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326524846|dbj|BAK04359.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 228

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/77 (66%), Positives = 52/77 (67%)
 Frame = -3

Query: 231 EPRETILLPGCDYNHXXXXXXXXXXXXXXXXXXXXDYNHWLIVMEFPKDPAPTREQMIDT 52
           E RETILLPGCDYNH                        WLIVMEFPKDPAPTREQMIDT
Sbjct: 71  EQRETILLPGCDYNH------------------------WLIVMEFPKDPAPTREQMIDT 106

Query: 51  YLNTLATVVGSMEEAKK 1
           YLNTLATV+GSMEEAKK
Sbjct: 107 YLNTLATVLGSMEEAKK 123


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