BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001742
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   3e-10
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   6e-10
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    69   8e-10
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               69   1e-09
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    69   1e-09

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 32/88 (36%), Positives = 53/88 (60%)
 Frame = +3

Query: 393 MTIQAWNCRGIGTTTAVQQLKDLLGKFEVDIMCLSETKASQDGIKKLSKQLKMSGSFAVP 572
           M I  WNCRG+G   +V+QL+    +F  DI+ +SET  ++  ++ L   L  S +F V 
Sbjct: 1   MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVA 60

Query: 573 ALGRSGGLAILWREGVDLEILGASRHQV 656
           ++GR+GGL + W+E V   ++  S+H +
Sbjct: 61  SVGRAGGLCLYWKEEVMFSLVSFSQHHI 88


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = +3

Query: 393 MTIQAWNCRGIGTTTAVQQLKDLLGKFEVDIMCLSETKASQDGIKKLSKQLKMSGSFAVP 572
           M I  WNCRG+G    V+QL+     +  DIM LSET  ++   + L  +L  + +F V 
Sbjct: 1   MNILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVS 60

Query: 573 ALGRSGGLAILWREGVDLEILGASRHQV 656
           + GR+GGL + WRE +   ++  S+H +
Sbjct: 61  SRGRAGGLCVFWREELSFSLVSFSQHHI 88


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 37/86 (43%), Positives = 50/86 (58%)
 Frame = +3

Query: 378 AASISMTIQAWNCRGIGTTTAVQQLKDLLGKFEVDIMCLSETKASQDGIKKLSKQLKMSG 557
           A S +M   +WNCRGIG  T VQ+L  L+ +     + L ET+   D IK+L  +L + G
Sbjct: 429 APSGAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRG 488

Query: 558 SFAVPALGRSGGLAILWREGVDLEIL 635
              V + G SGGLA+ W E V +EIL
Sbjct: 489 FAGVSSDGMSGGLALFWHESVHVEIL 514


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 29/75 (38%), Positives = 47/75 (62%)
 Frame = +3

Query: 408 WNCRGIGTTTAVQQLKDLLGKFEVDIMCLSETKASQDGIKKLSKQLKMSGSFAVPALGRS 587
           WNC+G+G    V++LK++  K+  D++CLSETK   D ++    +L  S    VP++G S
Sbjct: 59  WNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLS 118

Query: 588 GGLAILWREGVDLEI 632
           GGL +LW+  V + +
Sbjct: 119 GGLVVLWKPSVHISV 133


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 36/87 (41%), Positives = 51/87 (58%)
 Frame = +3

Query: 375 TAASISMTIQAWNCRGIGTTTAVQQLKDLLGKFEVDIMCLSETKASQDGIKKLSKQLKMS 554
           + A+ +M   +WNCRGIG  T VQ+L  L+ +     + L ET+   D IK+L  +L + 
Sbjct: 456 SGAAGAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLR 515

Query: 555 GSFAVPALGRSGGLAILWREGVDLEIL 635
           G   V + G SGGLA+ W E V +EIL
Sbjct: 516 GFAGVSSDGMSGGLALFWHESVHVEIL 542