BLASTX nr result

ID: Coptis25_contig00001739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001739
         (1885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30275.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F...   402   e-109
emb|CBI30276.3| unnamed protein product [Vitis vinifera]              402   e-109
ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F...   401   e-109
ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [S...   372   e-100

>emb|CBI30275.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  407 bits (1047), Expect = e-111
 Identities = 199/304 (65%), Positives = 249/304 (81%), Gaps = 1/304 (0%)
 Frame = -2

Query: 1212 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 1033
            AV SF++S + +LGV  PL+QSFFTYLSLALVY  ILL +R+KL + WYWY   GF+DVQ
Sbjct: 29   AVASFSSSFIADLGVDAPLTQSFFTYLSLALVYGSILLYRRQKLRISWYWYLFLGFVDVQ 88

Query: 1032 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 853
             NYLV KAYQYSSITSVTLLDC+TIPWV++LTWIF+GTRYSL QFFGAALCI GLGLV+L
Sbjct: 89   GNYLVNKAYQYSSITSVTLLDCWTIPWVIILTWIFLGTRYSLWQFFGAALCIVGLGLVLL 148

Query: 852  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNVGEEFCVKKRDRVEFISMCSIFGLIVSIT 673
            SDA   G  G  P++GD+LVI GTL +A+SNVGEEFCVKK+DRVE ++M  IFGL+VS+ 
Sbjct: 149  SDAGVGGGDGSRPLLGDILVIAGTLFFALSNVGEEFCVKKKDRVEVVTMIGIFGLLVSVC 208

Query: 672  EISIFERKNLEAVKWTPEIISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWA 493
            EISI E K+LE+V+W+ +II  F  +A+STF+FYTIVP ++++SG+  FNLS LTSDMWA
Sbjct: 209  EISIMELKSLESVEWSTDIILGFVGYAVSTFLFYTIVPFLLQISGATWFNLSLLTSDMWA 268

Query: 492  VIIRLFFYHQKLDWLYFLSFAVVAVGLVIYSATDEDPGAANDVEVGDPSVQYEVLTEE-T 316
            V+IR+FFYHQK+DWLY++SFA+VAVGLVIYS T++DP     +  G+ + +Y+VL EE T
Sbjct: 269  VVIRIFFYHQKVDWLYYISFAMVAVGLVIYSKTEKDPIPLPTLGDGNHNAEYQVLDEENT 328

Query: 315  EHPN 304
            E  N
Sbjct: 329  ESRN 332


>ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]
          Length = 673

 Score =  402 bits (1033), Expect = e-109
 Identities = 193/306 (63%), Positives = 245/306 (80%), Gaps = 1/306 (0%)
 Frame = -2

Query: 1212 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 1033
            AV+ FT+S + +LGV  PL+QSFFTYL LALV   ILL +R++L V WYWY   GFIDVQ
Sbjct: 365  AVSGFTSSFIADLGVDAPLTQSFFTYLCLALVNGSILLYRRQRLQVSWYWYLFLGFIDVQ 424

Query: 1032 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 853
             NYLV KA+QYSS+TSV LLDC+TIPWV++LTWIF+GTRYS+ QFFGAALC+ GLGLV+L
Sbjct: 425  GNYLVNKAFQYSSLTSVALLDCWTIPWVIILTWIFLGTRYSIWQFFGAALCVAGLGLVLL 484

Query: 852  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNVGEEFCVKKRDRVEFISMCSIFGLIVSIT 673
            SDA   G GG  P++GD LVI GTL  A+SNVGEEFCVKK+DRVE +SM  +FGL+VS+ 
Sbjct: 485  SDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNVGEEFCVKKKDRVELMSMLGLFGLLVSVC 544

Query: 672  EISIFERKNLEAVKWTPEIISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWA 493
            EISI E K+LE+++W+ +I+  F  FALS F+FYT+VP ++K+SG+ +FNLS LTSDMWA
Sbjct: 545  EISIVELKSLESIEWSTKIVLAFVGFALSNFLFYTLVPFLLKISGATMFNLSALTSDMWA 604

Query: 492  VIIRLFFYHQKLDWLYFLSFAVVAVGLVIYSATDEDPGAANDVEVGDPSVQYEVLT-EET 316
            V+IR+FFY QK+DWLY+LSFAVVA+G++IYS T++DP  +   E G+ S QY+VL  E T
Sbjct: 605  VVIRIFFYRQKVDWLYYLSFAVVAIGIIIYSTTEKDPIPSPSPEDGNLSAQYQVLNGEST 664

Query: 315  EHPNGV 298
            E  N +
Sbjct: 665  ESRNAI 670



 Score =  315 bits (806), Expect = 3e-83
 Identities = 164/314 (52%), Positives = 212/314 (67%), Gaps = 2/314 (0%)
 Frame = -2

Query: 1212 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 1033
            A +SF  S + +LGV  PL+QSFF YL L LV+  I L +R+ + V W WY   GF+DVQ
Sbjct: 50   AFSSFFTSSVIDLGVNVPLTQSFFAYLCLVLVFGTIRLGRRQNIRVSWIWYLFLGFVDVQ 109

Query: 1032 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 853
             NYLV KAYQYSS TSVTLLDC+TIPW M+ TWI +GTRYS+ QFFGAALC+ GL  V L
Sbjct: 110  GNYLVKKAYQYSSATSVTLLDCWTIPWAMIFTWIVLGTRYSIRQFFGAALCVAGLASVFL 169

Query: 852  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNVGEEFCVKKRDRVEFISMCSIFGLIVSIT 673
            SDA   G GG  PI+GD LV+ GTL  A+SNVGEEFCVKK+D VE ++M   FGL+    
Sbjct: 170  SDAGAGGGGGSKPILGDTLVVAGTLFLAMSNVGEEFCVKKKDSVEVVAMIGAFGLL---- 225

Query: 672  EISIFERKNLEAVKWTPEIISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWA 493
                              I+ L A   LSTF+FYT+VP ++K+SG+ + +LS LTSD+WA
Sbjct: 226  ------------------ILGL-AGHVLSTFLFYTLVPFLLKLSGATMLSLSLLTSDLWA 266

Query: 492  VIIRLFFYHQKLDWLYFLSFAVVAVGLVIYSATDEDPGAANDVEVGDPSV--QYEVLTEE 319
            V+IR++FYHQK+DWLY+LSFA + +GL+IYS   +D G++N     D ++  QY+ L E 
Sbjct: 267  VVIRVYFYHQKVDWLYYLSFATITIGLIIYS---KDEGSSNISVFEDQNLNAQYQELNEG 323

Query: 318  TEHPNGVILTLKGE 277
            +    G++ T  GE
Sbjct: 324  SA---GLLNTGSGE 334


>emb|CBI30276.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  402 bits (1033), Expect = e-109
 Identities = 193/306 (63%), Positives = 245/306 (80%), Gaps = 1/306 (0%)
 Frame = -2

Query: 1212 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 1033
            AV+ FT+S + +LGV  PL+QSFFTYL LALV   ILL +R++L V WYWY   GFIDVQ
Sbjct: 29   AVSGFTSSFIADLGVDAPLTQSFFTYLCLALVNGSILLYRRQRLQVSWYWYLFLGFIDVQ 88

Query: 1032 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 853
             NYLV KA+QYSS+TSV LLDC+TIPWV++LTWIF+GTRYS+ QFFGAALC+ GLGLV+L
Sbjct: 89   GNYLVNKAFQYSSLTSVALLDCWTIPWVIILTWIFLGTRYSIWQFFGAALCVAGLGLVLL 148

Query: 852  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNVGEEFCVKKRDRVEFISMCSIFGLIVSIT 673
            SDA   G GG  P++GD LVI GTL  A+SNVGEEFCVKK+DRVE +SM  +FGL+VS+ 
Sbjct: 149  SDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNVGEEFCVKKKDRVELMSMLGLFGLLVSVC 208

Query: 672  EISIFERKNLEAVKWTPEIISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMWA 493
            EISI E K+LE+++W+ +I+  F  FALS F+FYT+VP ++K+SG+ +FNLS LTSDMWA
Sbjct: 209  EISIVELKSLESIEWSTKIVLAFVGFALSNFLFYTLVPFLLKISGATMFNLSALTSDMWA 268

Query: 492  VIIRLFFYHQKLDWLYFLSFAVVAVGLVIYSATDEDPGAANDVEVGDPSVQYEVLT-EET 316
            V+IR+FFY QK+DWLY+LSFAVVA+G++IYS T++DP  +   E G+ S QY+VL  E T
Sbjct: 269  VVIRIFFYRQKVDWLYYLSFAVVAIGIIIYSTTEKDPIPSPSPEDGNLSAQYQVLNGEST 328

Query: 315  EHPNGV 298
            E  N +
Sbjct: 329  ESRNAI 334


>ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]
          Length = 352

 Score =  401 bits (1030), Expect = e-109
 Identities = 200/305 (65%), Positives = 250/305 (81%), Gaps = 2/305 (0%)
 Frame = -2

Query: 1212 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 1033
            AV SF++S + +LGV  PL+QSFFTYLSLALVY  ILL +R+KL + WYWY   GF+DVQ
Sbjct: 46   AVASFSSSFIADLGVDAPLTQSFFTYLSLALVYGSILLYRRQKLRISWYWYLFLGFVDVQ 105

Query: 1032 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 853
             NYLV KAYQYSSITSVTLLDC+TIPWV++LTWIF+GTRYSL QFFGAALCI GLGLV+L
Sbjct: 106  GNYLVNKAYQYSSITSVTLLDCWTIPWVIILTWIFLGTRYSLWQFFGAALCIVGLGLVLL 165

Query: 852  SDAKESGSG-GKNPIVGDLLVIGGTLGYAISNVGEEFCVKKRDRVEFISMCSIFGLIVSI 676
            SDA   G G G  P++GD+LVI GTL +A+SNVGEEFCVKK+DRVE ++M  IFGL+VS+
Sbjct: 166  SDA---GVGDGSRPLLGDILVIAGTLFFALSNVGEEFCVKKKDRVEVVTMIGIFGLLVSV 222

Query: 675  TEISIFERKNLEAVKWTPEIISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDMW 496
             EISI E K+LE+V+W+ +II  F  +A+STF+FYTIVP ++++SG+  FNLS LTSDMW
Sbjct: 223  CEISIMELKSLESVEWSTDIILGFVGYAVSTFLFYTIVPFLLQISGATWFNLSLLTSDMW 282

Query: 495  AVIIRLFFYHQKLDWLYFLSFAVVAVGLVIYSATDEDPGAANDVEVGDPSVQYEVLTEE- 319
            AV+IR+FFYHQK+DWLY++SFA+VAVGLVIYS T++DP     +  G+ + +Y+VL EE 
Sbjct: 283  AVVIRIFFYHQKVDWLYYISFAMVAVGLVIYSKTEKDPIPLPTLGDGNHNAEYQVLDEEN 342

Query: 318  TEHPN 304
            TE  N
Sbjct: 343  TESRN 347


>ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]
            gi|241945164|gb|EES18309.1| hypothetical protein
            SORBIDRAFT_09g021870 [Sorghum bicolor]
          Length = 347

 Score =  372 bits (954), Expect = e-100
 Identities = 181/302 (59%), Positives = 231/302 (76%), Gaps = 4/302 (1%)
 Frame = -2

Query: 1212 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 1033
            A +SFT+SL+ NLGV  PL+QSFF YL L LVY PI+L +R+KL + WYWY    F DVQ
Sbjct: 25   AASSFTSSLIANLGVDAPLTQSFFAYLLLTLVYVPIVLRRRQKLQIAWYWYLALAFFDVQ 84

Query: 1032 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 853
             NYLV+KAYQYS ITSVTLLDC+T+ WV++LTW  +GTRYSL QF GA  C+ GL LV+L
Sbjct: 85   GNYLVVKAYQYSYITSVTLLDCWTVVWVIILTWYALGTRYSLWQFVGAGTCVAGLALVLL 144

Query: 852  SDAK--ESGSGGKNPIVGDLLVIGGTLGYAISNVGEEFCVKKRDRVEFISMCSIFGLIVS 679
            SDA+  E    GK P++GD+LVI GT+G+A SNVGEE+CVKK+DRVE ++M  +FGL++S
Sbjct: 145  SDAESPEEQDPGKMPLLGDVLVIAGTVGFAFSNVGEEYCVKKKDRVEVVAMLGLFGLLIS 204

Query: 678  ITEISIFERKNLEAVKWTPEIISLFAAFALSTFVFYTIVPLVMKMSGSALFNLSNLTSDM 499
            I +I IFERK LEAV W+P +ISLFA FA++ F+FYTI P V+KMSG+ LFNLS LTSDM
Sbjct: 205  IVQILIFERKGLEAVTWSPTMISLFAGFAVAIFIFYTITPFVLKMSGATLFNLSLLTSDM 264

Query: 498  WAVIIRLFFYHQKLDWLYFLSFAVVAVGLVIYSATDEDPGAANDVEVG--DPSVQYEVLT 325
            WAV IR+ FY Q+++WLY+L+F VVA+GL+IYS  D    +++D   G  +   QY+ L 
Sbjct: 265  WAVAIRVLFYQQQINWLYYLAFTVVAIGLIIYSLND---SSSDDETAGSTEAPAQYQQLP 321

Query: 324  EE 319
             E
Sbjct: 322  IE 323


Top