BLASTX nr result

ID: Coptis25_contig00001721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001721
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518163.1| GATA transcription factor, putative [Ricinus...   148   4e-34
ref|XP_002285624.1| PREDICTED: GATA transcription factor 1-like ...   146   2e-33
ref|XP_002299291.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_004150343.1| PREDICTED: GATA transcription factor 1-like ...   128   6e-28
ref|XP_003610840.1| GATA transcription factor [Medicago truncatu...   117   1e-24

>ref|XP_002518163.1| GATA transcription factor, putative [Ricinus communis]
           gi|223542759|gb|EEF44296.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 205

 Score =  148 bits (374), Expect = 4e-34
 Identities = 86/169 (50%), Positives = 105/169 (62%), Gaps = 22/169 (13%)
 Frame = +2

Query: 5   EEELEWLSNQDAFPQIEMF-DILPMKPNNNVPKNQSHISVLGNS--------------DS 139
           EEELEWLSN+DAFP +E F DIL   P + + K++S +SVL NS              DS
Sbjct: 12  EEELEWLSNKDAFPSVETFVDILTENPGS-LQKHRSPVSVLENSTTSSTSNSGHSGTNDS 70

Query: 140 II-------RIPVQAXXXXXXXXXXLFSDFAGRQWWYQYEPKKKSAGVTRMAGMANSSGR 298
           +I        +PV+A             D  G+Q W+  E  KK   V  +   +++ GR
Sbjct: 71  VIMNYCRSLHVPVKARSKPHRRRRR---DLGGQQCWWSQENLKK---VKVVKSSSSTIGR 124

Query: 299 RCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFS 445
           +C HC +EKTPQWRAGPLGPKTLCNACGVRYKSGRL+PEYRPASSPTFS
Sbjct: 125 KCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFS 173


>ref|XP_002285624.1| PREDICTED: GATA transcription factor 1-like [Vitis vinifera]
          Length = 251

 Score =  146 bits (369), Expect = 2e-33
 Identities = 87/173 (50%), Positives = 98/173 (56%), Gaps = 25/173 (14%)
 Frame = +2

Query: 2   VEEELEWLSNQDAFPQIEMF-DILPMKPNNNVPKNQSHISVLGNSDSI------------ 142
           VEEELEWL N+D FP +E F D LP    N +PK QS ISVL NS               
Sbjct: 53  VEEELEWL-NKDVFPGVETFLDYLPTSVEN-IPKQQSPISVLENSSHSSSSNNSNSSTTT 110

Query: 143 -------IRIPVQAXXXXXXXXXXLFSDFAGRQWWY---QYEPKKKSAGVTRMAGMANSS 292
                   R+P +A           FSD  G+ WW+   Q       +  T       SS
Sbjct: 111 IMSCCENFRVPSRARSKRRRRRHKDFSDIPGQPWWWWSSQGNTNANHSSPTNSKQTITSS 170

Query: 293 --GRRCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFS 445
             GR+C HCQ+EKTPQWRAGPLGPKTLCNACGVRYKSGRL+ EYRPASSPTFS
Sbjct: 171 TIGRKCQHCQAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVAEYRPASSPTFS 223


>ref|XP_002299291.1| predicted protein [Populus trichocarpa] gi|222846549|gb|EEE84096.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  133 bits (334), Expect = 2e-29
 Identities = 78/169 (46%), Positives = 98/169 (57%), Gaps = 22/169 (13%)
 Frame = +2

Query: 5   EEELEWLSNQDAFPQIEM-FDILPMKPNNNVPKNQSHISVLGNSDSI------------- 142
           EEELEWLSN+DAFP +E  F  L  +P + +PK+ S +SVL NS +              
Sbjct: 68  EEELEWLSNKDAFPTVETCFGSLSGEPGS-IPKHHSPVSVLENSTTSSTSNSGNSSNSNI 126

Query: 143 ------IRIPVQAXXXXXXXXXXLFSDFAGRQWWYQ--YEPKKKSAGVTRMAGMANSSGR 298
                 +R+PV+A             +     WW Q  +  +K +  V ++       GR
Sbjct: 127 IMSYCRLRVPVKARSKRHHRHPREIQE--QECWWSQENFITRKPAVSVAKL-------GR 177

Query: 299 RCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFS 445
           +C HC  EKTPQWRAGP GPKTLCNACGVRYKSGRL+PEYRPA+SPTFS
Sbjct: 178 KCQHCGVEKTPQWRAGPDGPKTLCNACGVRYKSGRLVPEYRPANSPTFS 226


>ref|XP_004150343.1| PREDICTED: GATA transcription factor 1-like [Cucumis sativus]
           gi|449514819|ref|XP_004164489.1| PREDICTED: GATA
           transcription factor 1-like [Cucumis sativus]
          Length = 287

 Score =  128 bits (321), Expect = 6e-28
 Identities = 80/188 (42%), Positives = 97/188 (51%), Gaps = 41/188 (21%)
 Frame = +2

Query: 5   EEELEWLSNQDAFPQIEMF-DILPMKPNNNVP---------KNQSHISVL---------- 124
           EEELEWLSN+DAFP +E F DIL    +++ P         K  S +SVL          
Sbjct: 70  EEELEWLSNEDAFPAVETFVDILSDHHHHHAPQPPPLPSVSKQNSPVSVLESTSISSHGE 129

Query: 125 ----GNSDSI------------IRIPVQA-----XXXXXXXXXXLFSDFAGRQWWYQYEP 241
               GN  S+            +++P +A               LF      +   Q  P
Sbjct: 130 TTNGGNKTSVHSSSILMSCCGSLKVPSKARSKRRRGRHISGHHLLFKQQPSSKNLKQVVP 189

Query: 242 KKKSAGVTRMAGMANSSGRRCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYR 421
              +A V          GR+CLHC +EKTPQWRAGP GPKTLCNACGVR+KSGRL+PEYR
Sbjct: 190 TTATAAVVAATTGTAGIGRKCLHCGAEKTPQWRAGPFGPKTLCNACGVRFKSGRLVPEYR 249

Query: 422 PASSPTFS 445
           PASSPTFS
Sbjct: 250 PASSPTFS 257


>ref|XP_003610840.1| GATA transcription factor [Medicago truncatula]
           gi|355512175|gb|AES93798.1| GATA transcription factor
           [Medicago truncatula]
          Length = 331

 Score =  117 bits (293), Expect = 1e-24
 Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 19/164 (11%)
 Frame = +2

Query: 8   EELEWLSNQDAFPQIEMF-DILPMKPNNNVPKNQSHISVLGNSDSI-------------- 142
           E+LEWLSN+DAFP +E F D   ++P+  + +NQ    ++ NS S               
Sbjct: 47  EDLEWLSNKDAFPAVETFVDFSCIQPD--ISQNQKIAPIVENSTSSSNSNNSSNSITLLS 104

Query: 143 ----IRIPVQAXXXXXXXXXXLFSDFAGRQWWYQYEPKKKSAGVTRMAGMANSSGRRCLH 310
               ++ PV+A            SD    Q+ ++ +P  K++     A   ++ GR+C H
Sbjct: 105 GYNHVKFPVRARSKSRSKPRLGISDTWNHQFAWK-QPNNKTS--KEQAKQTSTIGRQCHH 161

Query: 311 CQSEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTF 442
           C ++ TP WR GP GPKTLCNACGVRY+SGRL+PEYRPA SPTF
Sbjct: 162 CGADNTPLWRTGPGGPKTLCNACGVRYRSGRLVPEYRPAKSPTF 205



 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +2

Query: 221 WWYQYEPKKKSAGVTRMAGMANSS-GRRCLHCQSEKTPQWRAGPLGPKTLCNACGVRYKS 397
           W  Q+  K+ S   ++      S+ GR+C HC ++ TPQWR GP GPKTLCNACGVRY+S
Sbjct: 233 WNRQFTWKQPSNNTSKEQSKKTSTIGRKCHHCGADNTPQWRVGPDGPKTLCNACGVRYRS 292

Query: 398 GRLLPEYRPASSPTF 442
           GRL+PEYRPA+SPTF
Sbjct: 293 GRLVPEYRPANSPTF 307


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