BLASTX nr result

ID: Coptis25_contig00001705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001705
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241...   245   2e-62
emb|CBI35888.3| unnamed protein product [Vitis vinifera]              245   2e-62
ref|XP_002530330.1| magnesium ion binding protein, putative [Ric...   223   1e-55
ref|XP_002884846.1| 4'-phosphopantetheinyl transferase family pr...   216   1e-53
ref|XP_002322823.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-53

>ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241207 [Vitis vinifera]
          Length = 317

 Score =  245 bits (625), Expect = 2e-62
 Identities = 122/199 (61%), Positives = 154/199 (77%), Gaps = 2/199 (1%)
 Frame = +3

Query: 3   VDWQCDKNWKPPPLHFNLSHTSSLIACGVTVDMPIGIDVEEKQRKTRNNLSSLARRFFTL 182
           VDWQ   +  PPPLHFN+SHTSSLIACGVT+D PIGIDVEEKQR T+NN+ S ARR+F+ 
Sbjct: 113 VDWQNHYDRNPPPLHFNISHTSSLIACGVTLDSPIGIDVEEKQRTTKNNILSFARRYFSP 172

Query: 183 DEVDYLNTISNPEIQRQEFIKLWTLKEAYVKALGKGFSAAPFNTFTIRFRGTSRLSLQKC 362
            EV+ L+ IS+PEIQR EF+KLWTLKEAYVKALG+GFSAAPF  FTIRFR  ++  L   
Sbjct: 173 HEVESLSIISDPEIQRLEFLKLWTLKEAYVKALGRGFSAAPFKNFTIRFRAATKGHLHLS 232

Query: 363 GHSNSEESEIIVETLAEPKNVTTNWRFALLELASSHYVAICVE--NKRIKGVENDPPLLK 536
           G+SNS+ SEIIVE+  +PK +T+NW+FALLEL  SHY AIC E  +  ++G  + P  L 
Sbjct: 233 GNSNSKASEIIVESSDDPKTLTSNWQFALLELTGSHYAAICKEKDDDTVEGKGSVPMKLT 292

Query: 537 VWKTVPFIKDELLSETDSV 593
           V KT+PF++D+ +S  D++
Sbjct: 293 VRKTIPFVEDQCISGKDAL 311


>emb|CBI35888.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  245 bits (625), Expect = 2e-62
 Identities = 122/199 (61%), Positives = 154/199 (77%), Gaps = 2/199 (1%)
 Frame = +3

Query: 3   VDWQCDKNWKPPPLHFNLSHTSSLIACGVTVDMPIGIDVEEKQRKTRNNLSSLARRFFTL 182
           VDWQ   +  PPPLHFN+SHTSSLIACGVT+D PIGIDVEEKQR T+NN+ S ARR+F+ 
Sbjct: 119 VDWQNHYDRNPPPLHFNISHTSSLIACGVTLDSPIGIDVEEKQRTTKNNILSFARRYFSP 178

Query: 183 DEVDYLNTISNPEIQRQEFIKLWTLKEAYVKALGKGFSAAPFNTFTIRFRGTSRLSLQKC 362
            EV+ L+ IS+PEIQR EF+KLWTLKEAYVKALG+GFSAAPF  FTIRFR  ++  L   
Sbjct: 179 HEVESLSIISDPEIQRLEFLKLWTLKEAYVKALGRGFSAAPFKNFTIRFRAATKGHLHLS 238

Query: 363 GHSNSEESEIIVETLAEPKNVTTNWRFALLELASSHYVAICVE--NKRIKGVENDPPLLK 536
           G+SNS+ SEIIVE+  +PK +T+NW+FALLEL  SHY AIC E  +  ++G  + P  L 
Sbjct: 239 GNSNSKASEIIVESSDDPKTLTSNWQFALLELTGSHYAAICKEKDDDTVEGKGSVPMKLT 298

Query: 537 VWKTVPFIKDELLSETDSV 593
           V KT+PF++D+ +S  D++
Sbjct: 299 VRKTIPFVEDQCISGKDAL 317


>ref|XP_002530330.1| magnesium ion binding protein, putative [Ricinus communis]
           gi|223530134|gb|EEF32046.1| magnesium ion binding
           protein, putative [Ricinus communis]
          Length = 315

 Score =  223 bits (567), Expect = 1e-55
 Identities = 116/206 (56%), Positives = 147/206 (71%), Gaps = 2/206 (0%)
 Frame = +3

Query: 3   VDWQCDKNWKPPPLHFNLSHTSSLIACGVTVDMPIGIDVEEKQRKTRNNLSSLARRFFTL 182
           V+ Q +    PPPLHFN+SHTSSLIACGVTV+  IGIDVEEKQRK +NN+ + ARR+F+ 
Sbjct: 107 VERQSEDGLFPPPLHFNISHTSSLIACGVTVNSQIGIDVEEKQRKIKNNVLAFARRYFSF 166

Query: 183 DEVDYLNTISNPEIQRQEFIKLWTLKEAYVKALGKGFSAAPFNTFTIRFR-GTSRLSLQK 359
            EV++L+ IS+ E+QRQEFI+LWTLKEAYVKALGKGFSAAPF TFTIR +  T    +  
Sbjct: 167 YEVEFLSAISDSEVQRQEFIRLWTLKEAYVKALGKGFSAAPFKTFTIRVKPATKEGHIVL 226

Query: 360 CGHSNSEESEIIVETLAEPKNVTTNWRFALLELASSHYVAICVENKRIKGVENDPPL-LK 536
               + E SEIIVE+  + KN+T+NW+ ALLELA SHY AIC+E  +        P+ L 
Sbjct: 227 AEDLDCEASEIIVESFDDHKNLTSNWQLALLELAGSHYAAICMEKDKTNEDGTKVPIKLT 286

Query: 537 VWKTVPFIKDELLSETDSVRTISSFV 614
            W+TVPF++DE +S T  V  I   +
Sbjct: 287 AWRTVPFVEDECVSGTRLVVPIRGLI 312


>ref|XP_002884846.1| 4'-phosphopantetheinyl transferase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330686|gb|EFH61105.1|
           4'-phosphopantetheinyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score =  216 bits (549), Expect = 1e-53
 Identities = 107/194 (55%), Positives = 142/194 (73%)
 Frame = +3

Query: 3   VDWQCDKNWKPPPLHFNLSHTSSLIACGVTVDMPIGIDVEEKQRKTRNNLSSLARRFFTL 182
           VDWQ  KN   PPLHFN+SHT SLIACGVTV +P+GIDVE+K+RK ++++ + A RF++ 
Sbjct: 111 VDWQNYKNCNIPPLHFNISHTDSLIACGVTVHVPVGIDVEDKERKIKHDVLAFAERFYSA 170

Query: 183 DEVDYLNTISNPEIQRQEFIKLWTLKEAYVKALGKGFSAAPFNTFTIRFRGTSRLSLQKC 362
           DEV +L+TI +PE QR+EFIKLWTLKEAYVKALGKGFSAAPFNTFTI+ +  ++     C
Sbjct: 171 DEVKFLSTIPDPESQRKEFIKLWTLKEAYVKALGKGFSAAPFNTFTIQSKAGTKGEYNLC 230

Query: 363 GHSNSEESEIIVETLAEPKNVTTNWRFALLELASSHYVAICVENKRIKGVENDPPLLKVW 542
                + SE+   +L +  N    W+F+LLELA SHY AIC+E+ +  G    P  + V 
Sbjct: 231 -----KTSEMTTSSLEKTNNCNGEWKFSLLELADSHYAAICIEDDQASG--GAPMRVIVR 283

Query: 543 KTVPFIKDELLSET 584
           KT+PF++DEL+SE+
Sbjct: 284 KTIPFVEDELISES 297


>ref|XP_002322823.1| predicted protein [Populus trichocarpa] gi|222867453|gb|EEF04584.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  216 bits (549), Expect = 1e-53
 Identities = 109/196 (55%), Positives = 141/196 (71%), Gaps = 1/196 (0%)
 Frame = +3

Query: 9   WQCDKNWKPPPLHFNLSHTSSLIACGVTVDMPIGIDVEEKQRKTRNNLSSLARRFFTLDE 188
           W+ D    P PLHFN+SHTSSLIACGVTV+ PIGIDVEEKQRK +NN+ + ARR+F+L E
Sbjct: 86  WESDDGQCPSPLHFNISHTSSLIACGVTVNSPIGIDVEEKQRKIKNNILAFARRYFSLYE 145

Query: 189 VDYLNTISNPEIQRQEFIKLWTLKEAYVKALGKGFSAAPFNTFTIRFRGTSRLSLQKCGH 368
           V++L+ IS+ E+QRQEF+KLW LKEAYVKALG+GFSAAPF TFTIR +  +   +     
Sbjct: 146 VEHLSAISDSEVQRQEFVKLWILKEAYVKALGRGFSAAPFKTFTIREKDATNSGV----- 200

Query: 369 SNSEESEIIVETLAEPKNVTTNWRFALLELASSHYVAICVENKRIKGVENDPPL-LKVWK 545
                S I+VE+   P ++T NW+F L ELASSHY A+C+E  +   V    P+ L V K
Sbjct: 201 --CPISSIVVESSDHPVSLTNNWQFGLFELASSHYAAVCMEKDKTSDVAMRVPMRLTVRK 258

Query: 546 TVPFIKDELLSETDSV 593
           T+PF++D  +S TD+V
Sbjct: 259 TIPFVEDICISGTDAV 274


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