BLASTX nr result

ID: Coptis25_contig00001676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001676
         (2991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB65156.1| basic cellulase [Citrus sinensis]                      228   2e-73
gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]          222   2e-71
ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|2...   221   5e-71
ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabido...   214   2e-69
ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinif...   209   3e-69

>gb|AAB65156.1| basic cellulase [Citrus sinensis]
          Length = 488

 Score =  228 bits (581), Expect(2) = 2e-73
 Identities = 106/118 (89%), Positives = 111/118 (94%)
 Frame = -2

Query: 1814 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 1635
            G+SDGL AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG++MG +L +AR AIRW
Sbjct: 60   GLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRW 119

Query: 1634 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 1461
            ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVS  NPGSDVAGET
Sbjct: 120  ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGET 177



 Score = 77.4 bits (189), Expect(2) = 2e-73
 Identities = 37/60 (61%), Positives = 43/60 (71%)
 Frame = -1

Query: 1458 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYKVRSLY 1279
            AAAS+VFRK DP            V+QFA+QY+GAYSDSLG A+CPFYCSYSGYK   L+
Sbjct: 182  AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLW 241


>gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]
          Length = 486

 Score =  222 bits (566), Expect(2) = 2e-71
 Identities = 103/118 (87%), Positives = 110/118 (93%)
 Frame = -2

Query: 1814 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 1635
            G+SDGL AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG+RMG +L +AR AIRW
Sbjct: 59   GLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRW 118

Query: 1634 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 1461
            ATDYLLKCATATPGKLYVGVGDPN DHKCWERPEDMDTVR+V+SVS  +PGSDVAGET
Sbjct: 119  ATDYLLKCATATPGKLYVGVGDPNVDHKCWERPEDMDTVRTVFSVSARSPGSDVAGET 176



 Score = 76.6 bits (187), Expect(2) = 2e-71
 Identities = 39/60 (65%), Positives = 43/60 (71%)
 Frame = -1

Query: 1458 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYKVRSLY 1279
            AAASMVFRKVD            KV QFA+QY+GAYSDSLG A+CPFYCSYSGYK   L+
Sbjct: 181  AAASMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYKDELLW 240


>ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|222870942|gb|EEF08073.1|
            predicted protein [Populus trichocarpa]
            gi|347466581|gb|AEO97203.1| endo-1,4-beta-glucanase
            [Populus trichocarpa] gi|347466635|gb|AEO97230.1|
            endo-1,4-beta-glucanase [Populus trichocarpa]
            gi|429326594|gb|AFZ78637.1| korrigan [Populus tomentosa]
          Length = 481

 Score =  221 bits (562), Expect(2) = 5e-71
 Identities = 102/118 (86%), Positives = 109/118 (92%)
 Frame = -2

Query: 1814 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 1635
            G+SDGL AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG+RMG +L +AR AIRW
Sbjct: 59   GLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRW 118

Query: 1634 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 1461
            ATDYLLKCATATPGKLYVGVGDPN DHKCWERPEDMDT R+V+SVS  +PGSDVAGET
Sbjct: 119  ATDYLLKCATATPGKLYVGVGDPNVDHKCWERPEDMDTARTVFSVSARSPGSDVAGET 176



 Score = 76.6 bits (187), Expect(2) = 5e-71
 Identities = 39/60 (65%), Positives = 43/60 (71%)
 Frame = -1

Query: 1458 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYKVRSLY 1279
            AAASMVFRKVD            KV QFA+QY+GAYSDSLG A+CPFYCSYSGYK   L+
Sbjct: 181  AAASMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYKDELLW 240


>ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
            lyrata] gi|297336382|gb|EFH66799.1| glycosyl hydrolase
            family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  214 bits (546), Expect(2) = 2e-69
 Identities = 99/118 (83%), Positives = 108/118 (91%)
 Frame = -2

Query: 1814 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 1635
            G+SDG +AHVDL GGYYDAGDNVKFNFPMAFTTTMLSWS+LEYG++MGS+L ++R AIRW
Sbjct: 58   GLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMGSELQNSRVAIRW 117

Query: 1634 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 1461
            ATDYLLKCA ATPGKLYVGVGDPN DHKCWERPEDMDT R+VYSVS  NPGSDVA ET
Sbjct: 118  ATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSSSNPGSDVAAET 175



 Score = 77.4 bits (189), Expect(2) = 2e-69
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = -1

Query: 1458 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYK 1294
            AA+SMVFRKVDP           KVMQFA+QY+GAYSDSL  ++CPFYCSYSGYK
Sbjct: 180  AASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYK 234


>ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinifera]
            gi|297734804|emb|CBI17038.3| unnamed protein product
            [Vitis vinifera]
          Length = 494

 Score =  209 bits (531), Expect(2) = 3e-69
 Identities = 97/118 (82%), Positives = 103/118 (87%)
 Frame = -2

Query: 1814 GISDGLAAHVDLRGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGERMGSQLGSARGAIRW 1635
            G+SDG  A VDL GGYYDAGDNVKFNFPMAF TTMLSW TLEYG+RMG QL ++R AIRW
Sbjct: 66   GLSDGSLARVDLTGGYYDAGDNVKFNFPMAFATTMLSWGTLEYGKRMGPQLQNSRAAIRW 125

Query: 1634 ATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSVGNPGSDVAGET 1461
            ATDYL+KCAT TP  LYVGVGDP ADHKCWERPEDMDTVR+VYSVS  NPGSDVAGET
Sbjct: 126  ATDYLIKCATTTPNTLYVGVGDPTADHKCWERPEDMDTVRTVYSVSPRNPGSDVAGET 183



 Score = 82.4 bits (202), Expect(2) = 3e-69
 Identities = 41/60 (68%), Positives = 45/60 (75%)
 Frame = -1

Query: 1458 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYKGAYSDSLGLAMCPFYCSYSGYKVRSLY 1279
            AAASMVFRKVDP           KVMQFA+QY+GAYSDSLG A+CPFYCSYSGYK   L+
Sbjct: 188  AAASMVFRKVDPKYSRLLLATAKKVMQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLW 247


Top