BLASTX nr result
ID: Coptis25_contig00001675
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001675
(683 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB65156.1| basic cellulase [Citrus sinensis] 201 1e-58
gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides] 195 8e-57
ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|2... 193 2e-56
ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinif... 186 6e-56
ref|XP_003598326.1| Endoglucanase [Medicago truncatula] gi|35548... 185 3e-54
>gb|AAB65156.1| basic cellulase [Citrus sinensis]
Length = 488
Score = 201 bits (510), Expect(3) = 1e-58
Identities = 94/109 (86%), Positives = 98/109 (89%)
Frame = -2
Query: 589 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSAGGAIWWATDYLLKCA 410
VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG +MG +L +A AI WATDYLLKCA
Sbjct: 69 VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCA 128
Query: 409 TATPGKLYVGVGDPNADHKCWERSEDMDTVRSVYSVSVGNPASDVAGET 263
TATPGKLYVGVGDPNADHKCWER EDMDTVRSVYSVS NP SDVAGET
Sbjct: 129 TATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGET 177
Score = 38.9 bits (89), Expect(3) = 1e-58
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -1
Query: 260 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYIGAYS 150
AAAS+VFRK DP V+QFA+QY GAYS
Sbjct: 182 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYS 218
Score = 34.3 bits (77), Expect(3) = 1e-58
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 147 DSLGSAVCLFYWSYSG*KD 91
DSLGSAVC FY SYSG KD
Sbjct: 219 DSLGSAVCPFYCSYSGYKD 237
>gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]
Length = 486
Score = 195 bits (495), Expect(3) = 8e-57
Identities = 91/109 (83%), Positives = 97/109 (88%)
Frame = -2
Query: 589 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSAGGAIWWATDYLLKCA 410
VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG RMG +L +A AI WATDYLLKCA
Sbjct: 68 VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKCA 127
Query: 409 TATPGKLYVGVGDPNADHKCWERSEDMDTVRSVYSVSVGNPASDVAGET 263
TATPGKLYVGVGDPN DHKCWER EDMDTVR+V+SVS +P SDVAGET
Sbjct: 128 TATPGKLYVGVGDPNVDHKCWERPEDMDTVRTVFSVSARSPGSDVAGET 176
Score = 38.5 bits (88), Expect(3) = 8e-57
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = -1
Query: 260 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYIGAYS 150
AAASMVFRKVD KV QFA+QY GAYS
Sbjct: 181 AAASMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYS 217
Score = 34.3 bits (77), Expect(3) = 8e-57
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 147 DSLGSAVCLFYWSYSG*KD 91
DSLGSAVC FY SYSG KD
Sbjct: 218 DSLGSAVCPFYCSYSGYKD 236
>ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|222870942|gb|EEF08073.1|
predicted protein [Populus trichocarpa]
gi|347466581|gb|AEO97203.1| endo-1,4-beta-glucanase
[Populus trichocarpa] gi|347466635|gb|AEO97230.1|
endo-1,4-beta-glucanase [Populus trichocarpa]
gi|429326594|gb|AFZ78637.1| korrigan [Populus tomentosa]
Length = 481
Score = 193 bits (491), Expect(3) = 2e-56
Identities = 90/109 (82%), Positives = 96/109 (88%)
Frame = -2
Query: 589 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSAGGAIWWATDYLLKCA 410
VDL GGYYDAGDN+KFNFPMAFTTTMLSWSTLEYG RMG +L +A AI WATDYLLKCA
Sbjct: 68 VDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKCA 127
Query: 409 TATPGKLYVGVGDPNADHKCWERSEDMDTVRSVYSVSVGNPASDVAGET 263
TATPGKLYVGVGDPN DHKCWER EDMDT R+V+SVS +P SDVAGET
Sbjct: 128 TATPGKLYVGVGDPNVDHKCWERPEDMDTARTVFSVSARSPGSDVAGET 176
Score = 38.5 bits (88), Expect(3) = 2e-56
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = -1
Query: 260 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYIGAYS 150
AAASMVFRKVD KV QFA+QY GAYS
Sbjct: 181 AAASMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYS 217
Score = 34.3 bits (77), Expect(3) = 2e-56
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 147 DSLGSAVCLFYWSYSG*KD 91
DSLGSAVC FY SYSG KD
Sbjct: 218 DSLGSAVCPFYCSYSGYKD 236
>ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinifera]
gi|297734804|emb|CBI17038.3| unnamed protein product
[Vitis vinifera]
Length = 494
Score = 186 bits (473), Expect(3) = 6e-56
Identities = 87/109 (79%), Positives = 92/109 (84%)
Frame = -2
Query: 589 VDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSAGGAIWWATDYLLKCA 410
VDL GGYYDAGDN+KFNFPMAF TTMLSW TLEYG RMG QL ++ AI WATDYL+KCA
Sbjct: 75 VDLTGGYYDAGDNVKFNFPMAFATTMLSWGTLEYGKRMGPQLQNSRAAIRWATDYLIKCA 134
Query: 409 TATPGKLYVGVGDPNADHKCWERSEDMDTVRSVYSVSVGNPASDVAGET 263
T TP LYVGVGDP ADHKCWER EDMDTVR+VYSVS NP SDVAGET
Sbjct: 135 TTTPNTLYVGVGDPTADHKCWERPEDMDTVRTVYSVSPRNPGSDVAGET 183
Score = 43.9 bits (102), Expect(3) = 6e-56
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1
Query: 260 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYIGAYS 150
AAASMVFRKVDP KVMQFA+QY GAYS
Sbjct: 188 AAASMVFRKVDPKYSRLLLATAKKVMQFAMQYRGAYS 224
Score = 34.3 bits (77), Expect(3) = 6e-56
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 147 DSLGSAVCLFYWSYSG*KD 91
DSLGSAVC FY SYSG KD
Sbjct: 225 DSLGSAVCPFYCSYSGYKD 243
>ref|XP_003598326.1| Endoglucanase [Medicago truncatula] gi|355487374|gb|AES68577.1|
Endoglucanase [Medicago truncatula]
Length = 484
Score = 185 bits (470), Expect(3) = 3e-54
Identities = 89/117 (76%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Frame = -2
Query: 610 MGRGKI-EVDLRGGYYDAGDNIKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSAGGAIWWA 434
M G++ VDL GGYYDAGDN+KFNFPMAFTTTMLSWST+EYG RMG Q+ A AI A
Sbjct: 59 MSDGRLANVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTIEYGKRMGPQMKEARAAIRHA 118
Query: 433 TDYLLKCATATPGKLYVGVGDPNADHKCWERSEDMDTVRSVYSVSVGNPASDVAGET 263
TDYLLKCAT+TPG+LYVGVGDPN DHKCWER EDMDTVR+VY VS NP SDVA ET
Sbjct: 119 TDYLLKCATSTPGRLYVGVGDPNVDHKCWERPEDMDTVRTVYFVSSKNPGSDVAAET 175
Score = 39.7 bits (91), Expect(3) = 3e-54
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = -1
Query: 260 AAASMVFRKVDPXXXXXXXXXXXKVMQFALQYIGAYS 150
AAAS+VFRKVDP KV QFALQY G+YS
Sbjct: 180 AAASIVFRKVDPTYSKLLLRTAQKVYQFALQYQGSYS 216
Score = 34.3 bits (77), Expect(3) = 3e-54
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -3
Query: 147 DSLGSAVCLFYWSYSG*KD 91
DSLGSAVC FY SYSG KD
Sbjct: 217 DSLGSAVCPFYCSYSGFKD 235