BLASTX nr result

ID: Coptis25_contig00001674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001674
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...   105   5e-21
ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794...    74   2e-11

>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
 Frame = +1

Query: 40  GLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNSGLF-PHGKTCGCGCEEDGEFQVHPVSV 216
           GL+NLLVLAVYK+PAGLC            +  GL  P  + C CGC+ D E Q+HP+S 
Sbjct: 51  GLVNLLVLAVYKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPCGCD-DTELQIHPISG 109

Query: 217 EMFKVE-NIVEKLNEEKVMELEKEMWDKFYSTGFWRSPSQRE 339
           ++   + ++    +E++VM+LEKEMWDKFYSTGFWRS SQRE
Sbjct: 110 DVTDADISVKSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151


>ref|XP_002322767.1| predicted protein [Populus trichocarpa] gi|222867397|gb|EEF04528.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
 Frame = +1

Query: 40  GLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNSGLFP-HGKTCGCGCEEDGEFQVHPV-- 210
           GL+NLLVL +YK+PAG+C            +  GLFP  G+  GCG  +D E  +HP+  
Sbjct: 52  GLVNLLVLTIYKIPAGICRRALKRKQRKKLIKKGLFPPRGRGYGCGSCDDPELHIHPMAR 111

Query: 211 ---SVEMFKVENIVEKLNEEKVMELEKEMWDKFYSTGFWRSPSQRE 339
              S+  F  E  V+K  EE ++ LEKEMW+ FY TGFWRSPSQRE
Sbjct: 112 VEDSLREFDGEEAVKK--EEAMLRLEKEMWETFYGTGFWRSPSQRE 155


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 9/109 (8%)
 Frame = +1

Query: 40  GLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNSGLFP-HGKTCGCGCEEDGEFQVHPVSV 216
           GL+NLL LA+YK+PAGLC            M  GL P   K C CGC+E  E Q+HP  +
Sbjct: 125 GLVNLLYLAIYKVPAGLCRRALRRKRRKQLMKEGLLPARTKRCRCGCDET-EIQIHPEMI 183

Query: 217 EMFKVE--------NIVEKLNEEKVMELEKEMWDKFYSTGFWRSPSQRE 339
            + + E        N V    ++ +++LEKEMW+ FYSTGFWRSPSQRE
Sbjct: 184 RLDEEETENGDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRE 232


>ref|XP_002309264.1| predicted protein [Populus trichocarpa] gi|222855240|gb|EEE92787.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
 Frame = +1

Query: 40  GLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNSGLFPHGKTCGCGCEEDG-EFQVHPVSV 216
           GL+NLLVL +YK+P G+C            +  GL P  +T  C C+ DG E Q+HP++ 
Sbjct: 68  GLVNLLVLTMYKVPVGICRRALRRKRRKKLIKKGLLPP-RTRSCSCDYDGTELQIHPMAC 126

Query: 217 EMFKVENIVEKL---NEEKVMELEKEMWDKFYSTGFWRSPSQRE 339
               +    E+     EE +++LEKEMW+ F  TGFWRS SQRE
Sbjct: 127 VEDSLREFDEEAALKEEEAMVKLEKEMWETFCGTGFWRSSSQRE 170


>ref|XP_003553628.1| PREDICTED: uncharacterized protein LOC100794951 [Glycine max]
          Length = 195

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 8/108 (7%)
 Frame = +1

Query: 40  GLMNLLVLAVYKLPAGLCXXXXXXXXXXXXMNSGLF-PHGKTCGCGCEED-GEFQVHPV- 210
           G+ N L+LA+YK+PAGL             +  GL  P  + C CGC +D    +++P+ 
Sbjct: 54  GVANFLLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGSRIYPMC 113

Query: 211 ---SVEMFKVENIVEKL--NEEKVMELEKEMWDKFYSTGFWRSPSQRE 339
              +V++ ++ +   +L  N++    LEKEMWD+FY TGFWRS S RE
Sbjct: 114 ANDAVDIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNRE 161


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