BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001668
         (1368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266268.1| PREDICTED: cytosolic Fe-S cluster assembly f...   576   e-162
ref|XP_003575297.1| PREDICTED: cytosolic Fe-S cluster assembly f...   568   e-159
ref|NP_568748.1| nucleotide binding protein 35 [Arabidopsis thal...   568   e-159
gb|AAK26019.1|AF360309_1 putative nucleotide-binding protein [Ar...   567   e-159
ref|XP_002298588.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159

>ref|XP_002266268.1| PREDICTED: cytosolic Fe-S cluster assembly factor nubp1-like [Vitis
            vinifera]
          Length = 353

 Score =  576 bits (1485), Expect = e-162
 Identities = 281/346 (81%), Positives = 313/346 (90%), Gaps = 2/346 (0%)
 Frame = -1

Query: 1272 MENG--NEIPEDANEHCPGPQSESAGKSDSCEGCPNQNVCATAPKGPDPALVEIAERMAT 1099
            MENG  N+IPE+ANEHCPGPQSESAG+SD+C+GCPNQ  CATAPKGPDP LV IAERMAT
Sbjct: 1    MENGDSNQIPENANEHCPGPQSESAGQSDACQGCPNQEACATAPKGPDPDLVAIAERMAT 60

Query: 1098 VKHKILVLSGKGGVGKSTFSAQLSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQEVHR 919
            VK KILVLSGKGGVGKSTFSAQLSFALA  MD+QVGLLDIDICGPSIPKMLGLEGQ++H+
Sbjct: 61   VKRKILVLSGKGGVGKSTFSAQLSFALAA-MDFQVGLLDIDICGPSIPKMLGLEGQDIHQ 119

Query: 918  SNLGLSLAYVEDNLGVMSIGFMLENADDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDA 739
            SNLG S  YVE NLGVMSIGFML N D+ VIWRGP+K+G+IKQFLKDV+WGELD+LVVDA
Sbjct: 120  SNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDA 179

Query: 738  PPGTSDEHITIVQLLQATGIDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSG 559
            PPGTSDEHI+IVQ LQ TGIDGAIIVTTPQQVSLIDVRKE++FCKKVGV VLGVVENMSG
Sbjct: 180  PPGTSDEHISIVQFLQGTGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGVEVLGVVENMSG 239

Query: 558  LRQPLGDVRFMRVSETGEERDDTEWALEYLRKNAPEMLNLVACSEVFDTSGGGAAKMCLE 379
            L QP+ D RF RV+ETGE++D TEW +EY+R+ APEMLNLVACSEVFD+S GGAAKMC E
Sbjct: 240  LCQPVTDFRFTRVTETGEQKDVTEWVIEYMREKAPEMLNLVACSEVFDSSSGGAAKMCKE 299

Query: 378  MGVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKIIEKLL 241
            M VPFLGKVP+DPQLCKA+EEGRSCF D +C  SAPAL++IIEKL+
Sbjct: 300  MNVPFLGKVPLDPQLCKAAEEGRSCFADTKCGVSAPALQRIIEKLV 345


>ref|XP_003575297.1| PREDICTED: cytosolic Fe-S cluster assembly factor nubp1-like
            [Brachypodium distachyon]
          Length = 348

 Score =  568 bits (1464), Expect = e-159
 Identities = 281/347 (80%), Positives = 308/347 (88%), Gaps = 3/347 (0%)
 Frame = -1

Query: 1272 MENGN---EIPEDANEHCPGPQSESAGKSDSCEGCPNQNVCATAPKGPDPALVEIAERMA 1102
            MENG    ++PEDAN HCPG QSE AGK+DSC GCPNQ +CATAPKGPDP LV IAERMA
Sbjct: 1    MENGGSKGDVPEDANAHCPGTQSEEAGKADSCAGCPNQQICATAPKGPDPDLVAIAERMA 60

Query: 1101 TVKHKILVLSGKGGVGKSTFSAQLSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQEVH 922
            TVKHKILVLSGKGGVGKSTFSAQLSFALA  MD+QVGLLDIDICGPSIPKMLGLEGQ++H
Sbjct: 61   TVKHKILVLSGKGGVGKSTFSAQLSFALAE-MDHQVGLLDIDICGPSIPKMLGLEGQDIH 119

Query: 921  RSNLGLSLAYVEDNLGVMSIGFMLENADDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVD 742
            +SNLG S  YVE NLGVMSIGFML N DD VIWRGP+K+GLIKQFLKDV WGE+DYL+VD
Sbjct: 120  QSNLGWSPIYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLIVD 179

Query: 741  APPGTSDEHITIVQLLQATGIDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMS 562
            APPGTSDEHI+IVQ LQATG+DGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMS
Sbjct: 180  APPGTSDEHISIVQYLQATGVDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMS 239

Query: 561  GLRQPLGDVRFMRVSETGEERDDTEWALEYLRKNAPEMLNLVACSEVFDTSGGGAAKMCL 382
            GLRQ   D++F++   TG E D TEWA+ Y+R+ APE+L++VACSEVFD+S GGA KMC 
Sbjct: 240  GLRQAFSDLKFLKPGATG-ETDATEWAMNYIREKAPELLSVVACSEVFDSSKGGAEKMCH 298

Query: 381  EMGVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKIIEKLL 241
            EMGVPFLGKVPMDPQLCKA+EEGRSCF DQRCSASAPALK II KL+
Sbjct: 299  EMGVPFLGKVPMDPQLCKAAEEGRSCFVDQRCSASAPALKSIIRKLI 345


>ref|NP_568748.1| nucleotide binding protein 35 [Arabidopsis thaliana]
            gi|23297101|gb|AAN13093.1| nucleotide-binding protein
            [Arabidopsis thaliana] gi|332008634|gb|AED96017.1|
            nucleotide binding protein 35 [Arabidopsis thaliana]
          Length = 350

 Score =  568 bits (1463), Expect = e-159
 Identities = 280/347 (80%), Positives = 314/347 (90%), Gaps = 1/347 (0%)
 Frame = -1

Query: 1272 MENGNEIPEDANEHCPGPQSESAGKSDSCEGCPNQNVCATAPKGPDPALVEIAERMATVK 1093
            MENG +IPEDANEHCPGPQSESAGKSDSC GCPNQ  CATAPKGPDP LV IAERM+TVK
Sbjct: 1    MENG-DIPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 1092 HKILVLSGKGGVGKSTFSAQLSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQEVHRSN 913
            HKILVLSGKGGVGKSTFSAQLSFALAG MD+QVGL+DIDICGPSIPKMLGLEGQE+H+SN
Sbjct: 60   HKILVLSGKGGVGKSTFSAQLSFALAG-MDHQVGLMDIDICGPSIPKMLGLEGQEIHQSN 118

Query: 912  LGLSLAYVEDNLGVMSIGFMLENADDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPP 733
            LG S  YVEDNLGVMSIGFML N+D+ VIWRGP+K+GLIKQFLKDV+WGE+DYLVVDAPP
Sbjct: 119  LGWSPVYVEDNLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQFLKDVYWGEIDYLVVDAPP 178

Query: 732  GTSDEHITIVQLLQATGIDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLR 553
            GTSDEHI+IVQ L  TGIDGAIIVTTPQ+VSLIDVRKE++FCKKVGVPVLGVVENMSGL 
Sbjct: 179  GTSDEHISIVQYLLPTGIDGAIIVTTPQEVSLIDVRKEVSFCKKVGVPVLGVVENMSGLS 238

Query: 552  QPLGDVRFMRV-SETGEERDDTEWALEYLRKNAPEMLNLVACSEVFDTSGGGAAKMCLEM 376
            QPL DV+FM++ +ETG   + TE  +  LRKNAPE+L++VACSEVFD+SGGGA +MC EM
Sbjct: 239  QPLKDVKFMKLATETGSSINVTEDVIACLRKNAPELLDIVACSEVFDSSGGGAERMCREM 298

Query: 375  GVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKIIEKLLPS 235
            GVPFLGKVPMDPQLCKA+E+G+SCF D +C  SAPALK II+K++PS
Sbjct: 299  GVPFLGKVPMDPQLCKAAEQGKSCFEDNKCLISAPALKSIIQKVVPS 345


>gb|AAK26019.1|AF360309_1 putative nucleotide-binding protein [Arabidopsis thaliana]
          Length = 350

 Score =  567 bits (1462), Expect = e-159
 Identities = 280/347 (80%), Positives = 313/347 (90%), Gaps = 1/347 (0%)
 Frame = -1

Query: 1272 MENGNEIPEDANEHCPGPQSESAGKSDSCEGCPNQNVCATAPKGPDPALVEIAERMATVK 1093
            MENG +IPEDANEHCPGPQSESAGKSDSC GCPNQ  CATAPKGPDP LV IAERM+TVK
Sbjct: 1    MENG-DIPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 1092 HKILVLSGKGGVGKSTFSAQLSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQEVHRSN 913
            HKILVLSGKGGVGKSTFSAQLSFALAG MD+QVGL+DIDICGPSIPKMLGLEGQE+H+SN
Sbjct: 60   HKILVLSGKGGVGKSTFSAQLSFALAG-MDHQVGLMDIDICGPSIPKMLGLEGQEIHQSN 118

Query: 912  LGLSLAYVEDNLGVMSIGFMLENADDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPP 733
            LG S  YVEDNLGVMSIGFML N+D+ VIWRGP+K+GLIKQFLKDV+WGE+DYLVVDAPP
Sbjct: 119  LGWSPVYVEDNLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQFLKDVYWGEIDYLVVDAPP 178

Query: 732  GTSDEHITIVQLLQATGIDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLR 553
            GTSDEHI+IVQ L  TGIDGAIIVTTPQ+VSLIDVRKE++FCKKVGVPVLGVVENMSGL 
Sbjct: 179  GTSDEHISIVQYLLPTGIDGAIIVTTPQEVSLIDVRKEVSFCKKVGVPVLGVVENMSGLS 238

Query: 552  QPLGDVRFMRV-SETGEERDDTEWALEYLRKNAPEMLNLVACSEVFDTSGGGAAKMCLEM 376
            QPL DV+FM++ +ETG   + TE  +  LRKNAPE+L++VACSEVFD+SGGGA +MC EM
Sbjct: 239  QPLKDVKFMKLATETGSSINVTEDVIACLRKNAPELLDIVACSEVFDSSGGGAERMCREM 298

Query: 375  GVPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKIIEKLLPS 235
            GVPFLGKVPMDPQLCKA+E+G+SCF D +C  SAPALK II+K+ PS
Sbjct: 299  GVPFLGKVPMDPQLCKAAEQGKSCFEDNKCLISAPALKSIIQKVFPS 345


>ref|XP_002298588.1| predicted protein [Populus trichocarpa] gi|222845846|gb|EEE83393.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  567 bits (1460), Expect = e-159
 Identities = 280/344 (81%), Positives = 308/344 (89%)
 Frame = -1

Query: 1272 MENGNEIPEDANEHCPGPQSESAGKSDSCEGCPNQNVCATAPKGPDPALVEIAERMATVK 1093
            MENG EIPE+ANEHCPGPQS+SAGKSDSC+GCPNQ  CATAPKGPDP LV IAERMATVK
Sbjct: 1    MENG-EIPENANEHCPGPQSDSAGKSDSCQGCPNQQDCATAPKGPDPDLVAIAERMATVK 59

Query: 1092 HKILVLSGKGGVGKSTFSAQLSFALAGVMDYQVGLLDIDICGPSIPKMLGLEGQEVHRSN 913
            HKILVLSGKGGVGKSTFSAQLS+ALA  MD+QVGL+DIDICGPSIPKMLGLEGQE+H+SN
Sbjct: 60   HKILVLSGKGGVGKSTFSAQLSYALAA-MDFQVGLMDIDICGPSIPKMLGLEGQEIHQSN 118

Query: 912  LGLSLAYVEDNLGVMSIGFMLENADDPVIWRGPKKDGLIKQFLKDVFWGELDYLVVDAPP 733
            LG S  YVE NLGVMSIGFML N D+ VIWRGP+K+GLIKQFLKDV+WGELD+LVVDAPP
Sbjct: 119  LGWSPVYVESNLGVMSIGFMLPNPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLVVDAPP 178

Query: 732  GTSDEHITIVQLLQATGIDGAIIVTTPQQVSLIDVRKEINFCKKVGVPVLGVVENMSGLR 553
            GTSDEHI+IVQ LQATGIDGAIIVTTPQQVSLIDVRKE++FCKKVGV VLGVVENMSGL 
Sbjct: 179  GTSDEHISIVQYLQATGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGVEVLGVVENMSGLC 238

Query: 552  QPLGDVRFMRVSETGEERDDTEWALEYLRKNAPEMLNLVACSEVFDTSGGGAAKMCLEMG 373
            Q L D RF ++ E GE+ D TE  L Y+R+ APEML+L+ACSEVFD+SGGGA +MC EMG
Sbjct: 239  QRLTDFRFAKLMENGEQNDITERVLGYMREKAPEMLDLIACSEVFDSSGGGATQMCQEMG 298

Query: 372  VPFLGKVPMDPQLCKASEEGRSCFTDQRCSASAPALKKIIEKLL 241
            VPFLGKVP+DPQLCKA+EEGRSCF DQ+C  SAP LK IIEKLL
Sbjct: 299  VPFLGKVPLDPQLCKAAEEGRSCFADQKCGVSAPVLKSIIEKLL 342