BLASTX nr result

ID: Coptis25_contig00001662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001662
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]        117   1e-24
ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|3555...   108   5e-22
ref|XP_002533868.1| protein with unknown function [Ricinus commu...   104   9e-21
ref|XP_003519669.1| PREDICTED: protein DGCR14 homolog [Glycine max]   102   4e-20
ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max]   101   7e-20

>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = -3

Query: 237 GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 58
           GLTKE+  TNTRFHGK +DSRPK+EDT+AV+YTP+ G T V  S +ERE +K++KYDLED
Sbjct: 259 GLTKEVNLTNTRFHGKLMDSRPKDEDTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLED 318

Query: 57  MRKTPNLFYVEFGKKADNG 1
           +RKTPN FYVE  K+ADNG
Sbjct: 319 LRKTPNPFYVESRKRADNG 337


>ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|355519304|gb|AET00928.1|
           Protein DGCR14 [Medicago truncatula]
          Length = 510

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/77 (67%), Positives = 63/77 (81%)
 Frame = -3

Query: 231 TKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLEDMR 52
           TKEI R NTRFHGK +DSRPKE+ T+ ++YTPVAG T V  S+  R+A+K +KYDLED+R
Sbjct: 269 TKEIDRVNTRFHGKMMDSRPKEDGTVEMLYTPVAGATPVPMSF--RDADKLKKYDLEDLR 326

Query: 51  KTPNLFYVEFGKKADNG 1
           KTPN FY+E GKKADNG
Sbjct: 327 KTPNPFYLESGKKADNG 343


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
           gi|223526190|gb|EEF28518.1| protein with unknown
           function [Ricinus communis]
          Length = 519

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/79 (60%), Positives = 63/79 (79%)
 Frame = -3

Query: 237 GLTKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLED 58
           GLTKEI R+NTRFHGK +DSRPK++ ++ V+YTPV GGT +    + R  +K +KYDLED
Sbjct: 276 GLTKEINRSNTRFHGKMLDSRPKDDGSVEVLYTPVVGGTPL--PVSGRHGDKAKKYDLED 333

Query: 57  MRKTPNLFYVEFGKKADNG 1
           +R+TPN FY+E GKKA+NG
Sbjct: 334 LRRTPNNFYMESGKKAENG 352


>ref|XP_003519669.1| PREDICTED: protein DGCR14 homolog [Glycine max]
          Length = 500

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = -3

Query: 231 TKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLEDMR 52
           TKEI R NTRFHGK +DSRPK++ T+ V+YTPVAG T      + RE +K +KYDLED+R
Sbjct: 258 TKEINRGNTRFHGKMMDSRPKDDGTVEVLYTPVAGATP--GPMSLREGDKLKKYDLEDLR 315

Query: 51  KTPNLFYVEFGKKADNG 1
           KTPN FY+E GKKA+NG
Sbjct: 316 KTPNPFYLESGKKAENG 332


>ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max]
          Length = 500

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -3

Query: 231 TKEIQRTNTRFHGKSVDSRPKEEDTIAVMYTPVAGGTLVFSSYAEREAEKTRKYDLEDMR 52
           TKEI R NTRFHGK +DSRPK++ T+ V+YTPV G T    S   RE +K +KYDLED+R
Sbjct: 258 TKEINRGNTRFHGKMMDSRPKDDGTVEVLYTPVGGATPAPMSL--REGDKLKKYDLEDLR 315

Query: 51  KTPNLFYVEFGKKADNG 1
           KTPN FY+E GKKA+NG
Sbjct: 316 KTPNPFYLESGKKAENG 332


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