BLASTX nr result
ID: Coptis25_contig00001661
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00001661 (239 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] 125 5e-27 ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|3555... 112 2e-23 ref|XP_002533868.1| protein with unknown function [Ricinus commu... 109 3e-22 ref|XP_003519669.1| PREDICTED: protein DGCR14 homolog [Glycine max] 107 1e-21 ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max] 106 2e-21 >ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] Length = 504 Score = 125 bits (313), Expect = 5e-27 Identities = 57/79 (72%), Positives = 70/79 (88%) Frame = +3 Query: 3 GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 182 GLTKE++ TNTRFHGKL+DSRPK+EDT+AV+YTP+ G TPV S +ERE +K++KYDLED Sbjct: 259 GLTKEVNLTNTRFHGKLMDSRPKDEDTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLED 318 Query: 183 MRKTPNLFYVESGKKADNG 239 +RKTPN FYVES K+ADNG Sbjct: 319 LRKTPNPFYVESRKRADNG 337 >ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|355519304|gb|AET00928.1| Protein DGCR14 [Medicago truncatula] Length = 510 Score = 112 bits (281), Expect = 2e-23 Identities = 53/77 (68%), Positives = 65/77 (84%) Frame = +3 Query: 9 TKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLEDMR 188 TKEI NTRFHGK++DSRPKE+ T+ ++YTPVAG TPV S+ R+A+K +KYDLED+R Sbjct: 269 TKEIDRVNTRFHGKMMDSRPKEDGTVEMLYTPVAGATPVPMSF--RDADKLKKYDLEDLR 326 Query: 189 KTPNLFYVESGKKADNG 239 KTPN FY+ESGKKADNG Sbjct: 327 KTPNPFYLESGKKADNG 343 >ref|XP_002533868.1| protein with unknown function [Ricinus communis] gi|223526190|gb|EEF28518.1| protein with unknown function [Ricinus communis] Length = 519 Score = 109 bits (272), Expect = 3e-22 Identities = 49/79 (62%), Positives = 66/79 (83%) Frame = +3 Query: 3 GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 182 GLTKEI+ +NTRFHGK++DSRPK++ ++ V+YTPV GGTP+ + R +K +KYDLED Sbjct: 276 GLTKEINRSNTRFHGKMLDSRPKDDGSVEVLYTPVVGGTPL--PVSGRHGDKAKKYDLED 333 Query: 183 MRKTPNLFYVESGKKADNG 239 +R+TPN FY+ESGKKA+NG Sbjct: 334 LRRTPNNFYMESGKKAENG 352 >ref|XP_003519669.1| PREDICTED: protein DGCR14 homolog [Glycine max] Length = 500 Score = 107 bits (266), Expect = 1e-21 Identities = 50/77 (64%), Positives = 63/77 (81%) Frame = +3 Query: 9 TKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLEDMR 188 TKEI+ NTRFHGK++DSRPK++ T+ V+YTPVAG TP + RE +K +KYDLED+R Sbjct: 258 TKEINRGNTRFHGKMMDSRPKDDGTVEVLYTPVAGATP--GPMSLREGDKLKKYDLEDLR 315 Query: 189 KTPNLFYVESGKKADNG 239 KTPN FY+ESGKKA+NG Sbjct: 316 KTPNPFYLESGKKAENG 332 >ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max] Length = 500 Score = 106 bits (264), Expect = 2e-21 Identities = 50/77 (64%), Positives = 62/77 (80%) Frame = +3 Query: 9 TKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLEDMR 188 TKEI+ NTRFHGK++DSRPK++ T+ V+YTPV G TP S RE +K +KYDLED+R Sbjct: 258 TKEINRGNTRFHGKMMDSRPKDDGTVEVLYTPVGGATPAPMSL--REGDKLKKYDLEDLR 315 Query: 189 KTPNLFYVESGKKADNG 239 KTPN FY+ESGKKA+NG Sbjct: 316 KTPNPFYLESGKKAENG 332