BLASTX nr result

ID: Coptis25_contig00001661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001661
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]        125   5e-27
ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|3555...   112   2e-23
ref|XP_002533868.1| protein with unknown function [Ricinus commu...   109   3e-22
ref|XP_003519669.1| PREDICTED: protein DGCR14 homolog [Glycine max]   107   1e-21
ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max]   106   2e-21

>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/79 (72%), Positives = 70/79 (88%)
 Frame = +3

Query: 3   GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 182
           GLTKE++ TNTRFHGKL+DSRPK+EDT+AV+YTP+ G TPV  S +ERE +K++KYDLED
Sbjct: 259 GLTKEVNLTNTRFHGKLMDSRPKDEDTVAVLYTPIPGATPVPLSLSEREGDKSKKYDLED 318

Query: 183 MRKTPNLFYVESGKKADNG 239
           +RKTPN FYVES K+ADNG
Sbjct: 319 LRKTPNPFYVESRKRADNG 337


>ref|XP_003617969.1| Protein DGCR14 [Medicago truncatula] gi|355519304|gb|AET00928.1|
           Protein DGCR14 [Medicago truncatula]
          Length = 510

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/77 (68%), Positives = 65/77 (84%)
 Frame = +3

Query: 9   TKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLEDMR 188
           TKEI   NTRFHGK++DSRPKE+ T+ ++YTPVAG TPV  S+  R+A+K +KYDLED+R
Sbjct: 269 TKEIDRVNTRFHGKMMDSRPKEDGTVEMLYTPVAGATPVPMSF--RDADKLKKYDLEDLR 326

Query: 189 KTPNLFYVESGKKADNG 239
           KTPN FY+ESGKKADNG
Sbjct: 327 KTPNPFYLESGKKADNG 343


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
           gi|223526190|gb|EEF28518.1| protein with unknown
           function [Ricinus communis]
          Length = 519

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/79 (62%), Positives = 66/79 (83%)
 Frame = +3

Query: 3   GLTKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLED 182
           GLTKEI+ +NTRFHGK++DSRPK++ ++ V+YTPV GGTP+    + R  +K +KYDLED
Sbjct: 276 GLTKEINRSNTRFHGKMLDSRPKDDGSVEVLYTPVVGGTPL--PVSGRHGDKAKKYDLED 333

Query: 183 MRKTPNLFYVESGKKADNG 239
           +R+TPN FY+ESGKKA+NG
Sbjct: 334 LRRTPNNFYMESGKKAENG 352


>ref|XP_003519669.1| PREDICTED: protein DGCR14 homolog [Glycine max]
          Length = 500

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/77 (64%), Positives = 63/77 (81%)
 Frame = +3

Query: 9   TKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLEDMR 188
           TKEI+  NTRFHGK++DSRPK++ T+ V+YTPVAG TP     + RE +K +KYDLED+R
Sbjct: 258 TKEINRGNTRFHGKMMDSRPKDDGTVEVLYTPVAGATP--GPMSLREGDKLKKYDLEDLR 315

Query: 189 KTPNLFYVESGKKADNG 239
           KTPN FY+ESGKKA+NG
Sbjct: 316 KTPNPFYLESGKKAENG 332


>ref|XP_003544200.1| PREDICTED: protein DGCR14 homolog [Glycine max]
          Length = 500

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/77 (64%), Positives = 62/77 (80%)
 Frame = +3

Query: 9   TKEIHGTNTRFHGKLVDSRPKEEDTIAVMYTPVAGGTPVFSSYAEREAEKTRKYDLEDMR 188
           TKEI+  NTRFHGK++DSRPK++ T+ V+YTPV G TP   S   RE +K +KYDLED+R
Sbjct: 258 TKEINRGNTRFHGKMMDSRPKDDGTVEVLYTPVGGATPAPMSL--REGDKLKKYDLEDLR 315

Query: 189 KTPNLFYVESGKKADNG 239
           KTPN FY+ESGKKA+NG
Sbjct: 316 KTPNPFYLESGKKAENG 332


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