BLASTX nr result

ID: Coptis25_contig00001644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001644
         (2771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448503.1| hypothetical protein SORBIDRAFT_06g028070 [S...    73   4e-10
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    72   8e-10
ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [S...    71   1e-09
ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, par...    71   2e-09
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-09

>ref|XP_002448503.1| hypothetical protein SORBIDRAFT_06g028070 [Sorghum bicolor]
            gi|241939686|gb|EES12831.1| hypothetical protein
            SORBIDRAFT_06g028070 [Sorghum bicolor]
          Length = 909

 Score = 73.2 bits (178), Expect = 4e-10
 Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
 Frame = -2

Query: 2017 VEFDADGQPVGDRSTDYVSFLGRITKK--YCSIVYESFKDVTDQTRDLIWKCITDEYDVP 1844
            V  ++ GQP+G  +    SFLG + +      + Y ++K V ++ +D++   +  ++D+ 
Sbjct: 639  VSLNSSGQPIGKEAATLTSFLGALARDGILAPLTYHNWKLVPEKNKDVMCHIVKLKFDIA 698

Query: 1843 ESYRKCQFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESKPX 1664
               +    K +AK +R +K +L+ +H+D ++ +E+R  +   RV +E W   V   S   
Sbjct: 699  PFPKSWILKSLAKKWRTWKFQLKQQHFDTHETEEERLADRNPRVLKEHWRFLVAYWSTEK 758

Query: 1663 XXXXXXXXXXXRNSLKAVHTSGRRGSARTVYDMKKKDPTAN-VTRTDSYMAINTCKDG 1493
                       +  +    TSG +  AR + + K+K P  +  T  D ++  +T KDG
Sbjct: 759  AQALSAQNKAIQAKVTTYQTSGTKSFARRIEEEKQKWPNKDEPTVEDLFILTHTPKDG 816


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 72.0 bits (175), Expect = 8e-10
 Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 6/212 (2%)
 Frame = -2

Query: 2026 KKTVEFDADGQPVGDRSTDYVSFLGRITKKYCSIVYESFKDVTDQTRDLIWKCITDEYDV 1847
            ++ VE+     PVG  S    S++G + +++  I  E++KDV+   + + WK +   +++
Sbjct: 924  RERVEYTIMRDPVGPGSVKLASYVGTLVREHVPITIETWKDVSQDMKTVPWKSMQARFEL 983

Query: 1846 PESY-RKCQFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESK 1670
             E + R    K++   +R YK R   K  +   N++ +    P  +   +W  FV+ ++ 
Sbjct: 984  DEEFQRVAVLKQMGSLWRSYKSR-TVKDINLAPNNQQKMNLRPMNISPIEWRKFVKIKTS 1042

Query: 1669 PXXXXXXXXXXXXRNSLKAVHTSGRRGSARTVYDMKKK--DPTANVTRTDSYMAINTCKD 1496
                         R + +  HT+ R+G  R   DMK +  DP + VTR   ++   T KD
Sbjct: 1043 AAFKVVSDKYKERRRN-QIPHTTSRKGMVRLAEDMKLESGDP-SEVTRLKFWVKSRTKKD 1100

Query: 1495 GSFFAPEKMEQIKAII---EKDPSSINLDIDH 1409
            G+       EQI A +   +  P+S N + DH
Sbjct: 1101 GTPVNTNAAEQIAAELVGSDGPPTSANPEEDH 1132


>ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [Sorghum bicolor]
            gi|241940255|gb|EES13400.1| hypothetical protein
            SORBIDRAFT_07g004115 [Sorghum bicolor]
          Length = 565

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
 Frame = -2

Query: 1999 GQPVGDRSTDYVSFLGRITKKYCSIVYESFKDVTDQTRDLIWKCITDEYDVPESYRKCQF 1820
            GQP+G     + S +G + ++  S+    ++ V  + +D +W+ + + YDV E+ +    
Sbjct: 135  GQPIGQNYRQFSSAIGCLVRRTLSVGCSDWRLVDVEKKDQVWETLKEFYDVDEAAKNWFL 194

Query: 1819 KKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESKPXXXXXXXXX 1640
               A+ ++++K  L+ + +D+    E  +R   +RVK  DW+  +++ + P         
Sbjct: 195  ITAARKWKDFKATLKKEFFDEKITIEALQRKHGDRVKPTDWKFLIKHWTSPEFEARMEIS 254

Query: 1639 XXXRNSLKAVHTSGRRGSARTVYDMKKKDPTANVTRTDS-YMAINTCKDG--SFFAPEKM 1469
               R  L+  HTSG +  A + ++M  +     V R D  Y+  +T K+G  S  A   +
Sbjct: 255  KANRTKLRIHHTSGSKSFACSRHEMAIE--LGRVPRRDEIYIRTHTRKNGVPSQQAEPII 312

Query: 1468 EQIKAIIEKDPSSINLDIDHDPVAQV 1391
             ++++++E  P  I   I    V  V
Sbjct: 313  NKLRSVVEAHPELIERSIQQGDVFTV 338


>ref|XP_004173647.1| PREDICTED: uncharacterized LOC101217008, partial [Cucumis sativus]
          Length = 345

 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
 Frame = -2

Query: 2026 KKTVEFDADGQPVGDRSTDYVSFLGRITKKYCSIVYESFKDVTDQTRDLIWKCITDEYDV 1847
            K  + FD  GQP+G+ S    SFLG + ++   +   +++ ++  +++++W  I   Y+V
Sbjct: 156  KVDITFDQFGQPIGEASIGLSSFLGALVREVVPVTLSNWRKLSTTSKEILWTSIQLRYNV 215

Query: 1846 PESY-RKCQFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESK 1670
             E + RKC F+K+ + +R  K R+ ++      N+E  +          DW  FV+ E K
Sbjct: 216  KEVWQRKCIFRKMGRLWRAGKSRIVSQIQSTSTNEELVKMKPSNVQSMHDWMDFVK-EKK 274

Query: 1669 PXXXXXXXXXXXXRNSLKAVHTSGRRGSARTVYDMKKKD-PTANVTR 1532
                            ++  HT  R+G AR   +M+K    +++VTR
Sbjct: 275  SATFKAKSEKFKSMKKMQLPHTCSRKGYARLAEEMRKSCLDSSSVTR 321


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
 Frame = -2

Query: 1999 GQPVGDRSTDYVSFLGRITK--KYCSIVYESFKDVTDQTRDLIWKCITDEYDVPESYRKC 1826
            GQPVG  ++   +FLG + +  +   + +  +  + D+ ++ +W+ +  ++D+    +  
Sbjct: 18   GQPVGPEASKLSTFLGTVARNGEMAPLTFVDWFAMPDEKKENMWQFVQTKFDIEPVCKTW 77

Query: 1825 QFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESKPXXXXXXX 1646
              + +A  +R +K +L+++HY  +  DE+R  +   RV  E W + +   +         
Sbjct: 78   VLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQLRSA 137

Query: 1645 XXXXXRNSLKAVHTSGRRGSARTVYDMK-KKDPTANVTRTDSYMAINTCKDG 1493
                 R++ K+ HT+G +  AR   + + KK      TR + Y+   T KDG
Sbjct: 138  KNKANRSNQKSTHTAGSKSFARIREEERTKKSGGKEPTRAELYIKTRTRKDG 189


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