BLASTX nr result

ID: Coptis25_contig00001642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001642
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l...   508   e-141
ref|XP_004156430.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik...   501   e-139
ref|XP_004139195.1| PREDICTED: pre-mRNA-splicing factor SLU7-lik...   501   e-139
ref|XP_003552180.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l...   495   e-137
ref|XP_003529103.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l...   495   e-137

>ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Vitis vinifera]
          Length = 537

 Score =  508 bits (1308), Expect = e-141
 Identities = 265/381 (69%), Positives = 281/381 (73%)
 Frame = -3

Query: 1143 MATASMAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 964
            MATAS+AFKSREDHRKQ+ELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQLELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 963  SLKHQRKWKSDPNYTKAWYDRGAKVHQAEKYRKGACENCGAXXXXXXXXXXXXXXXXXXX 784
            SLKHQRKWKSDPNYTKAWYDRGAK+ QA+KYRKGACENCGA                   
Sbjct: 61   SLKHQRKWKSDPNYTKAWYDRGAKIFQADKYRKGACENCGAMTHNAKTCMERPRQKGAKW 120

Query: 783  XXXXXXXXXXXXXXXXXXXXXXXTFELDYDGKRDRWNGYDPATFARVIERYEARDEARRK 604
                                   TFELDYDGKRDRWNGYD AT+ARVIERYEARDEARRK
Sbjct: 121  TSMHIAPDEKIE-----------TFELDYDGKRDRWNGYDAATYARVIERYEARDEARRK 169

Query: 603  YXXXXXXXXXXXKNSNPXXXXXXXXXXXXXXXXXXXXXEAKVDESKQMDFAKVEKRVRXX 424
            Y           KN N                      EAKVDESKQMDFAKVEKRVR  
Sbjct: 170  YLKEQQLKKLEEKN-NKQNGEEEVSDEEEDDEDDLKVDEAKVDESKQMDFAKVEKRVRTT 228

Query: 423  XXXXXXTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDSDPNEKFYGGDNQYR 244
                  TVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPD+DPNEKFYGGDNQYR
Sbjct: 229  GGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYGGDNQYR 288

Query: 243  TSGQAMEFKQLNVHAWEAYEKGQDVHMQAAPSQAELLYKNYXXXXXXXXXXXXXTIMEKY 64
             SGQA+EFKQLN+HAWEA++KGQD+HMQAAPSQAELL+KNY             TIM+KY
Sbjct: 289  VSGQALEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSRMKDTIMDKY 348

Query: 63   GNAAAEEEIPKELLLGQSEKQ 1
            GNAAAEEE+P+ELLLGQSE+Q
Sbjct: 349  GNAAAEEELPRELLLGQSERQ 369


>ref|XP_004156430.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Cucumis sativus]
          Length = 536

 Score =  501 bits (1289), Expect = e-139
 Identities = 259/381 (67%), Positives = 278/381 (72%)
 Frame = -3

Query: 1143 MATASMAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 964
            MATAS+AFKSREDHRKQ+ELEEARKAGLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 963  SLKHQRKWKSDPNYTKAWYDRGAKVHQAEKYRKGACENCGAXXXXXXXXXXXXXXXXXXX 784
            SLKHQRKWKSDPNYTK+WYDRGAK+HQA+KYRKGACENCGA                   
Sbjct: 61   SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGAMTHDSKSCMERPRKVGAKW 120

Query: 783  XXXXXXXXXXXXXXXXXXXXXXXTFELDYDGKRDRWNGYDPATFARVIERYEARDEARRK 604
                                   TFELDYDGKRDRWNGYDPAT+ARVIERYEARDEARRK
Sbjct: 121  TNMHIAPDEKIE-----------TFELDYDGKRDRWNGYDPATYARVIERYEARDEARRK 169

Query: 603  YXXXXXXXXXXXKNSNPXXXXXXXXXXXXXXXXXXXXXEAKVDESKQMDFAKVEKRVRXX 424
            +           KN+                        AKVDESKQMDFAKVEKRVR  
Sbjct: 170  FLKEQQLKKLEEKNTKQNEDDEVSAEDEDEDDLKVDE--AKVDESKQMDFAKVEKRVRTT 227

Query: 423  XXXXXXTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDSDPNEKFYGGDNQYR 244
                  TVRNLRIREDTAKYLLNLDVNSA+YDPKTRSMREDPLPD DPNEKFY GDNQYR
Sbjct: 228  GGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDVDPNEKFYEGDNQYR 287

Query: 243  TSGQAMEFKQLNVHAWEAYEKGQDVHMQAAPSQAELLYKNYXXXXXXXXXXXXXTIMEKY 64
             SGQA++FKQLNVHAWEA++KGQD+HMQAAPSQAELLYKNY              IMEKY
Sbjct: 288  ISGQALDFKQLNVHAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSHTKDAIMEKY 347

Query: 63   GNAAAEEEIPKELLLGQSEKQ 1
            GNAA EE++P+ELLLGQSE+Q
Sbjct: 348  GNAADEEQLPRELLLGQSERQ 368


>ref|XP_004139195.1| PREDICTED: pre-mRNA-splicing factor SLU7-like [Cucumis sativus]
          Length = 536

 Score =  501 bits (1289), Expect = e-139
 Identities = 259/381 (67%), Positives = 278/381 (72%)
 Frame = -3

Query: 1143 MATASMAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 964
            MATAS+AFKSREDHRKQ+ELEEARKAGLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 963  SLKHQRKWKSDPNYTKAWYDRGAKVHQAEKYRKGACENCGAXXXXXXXXXXXXXXXXXXX 784
            SLKHQRKWKSDPNYTK+WYDRGAK+HQA+KYRKGACENCGA                   
Sbjct: 61   SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGAMTHDAKACMERPRKVGAKW 120

Query: 783  XXXXXXXXXXXXXXXXXXXXXXXTFELDYDGKRDRWNGYDPATFARVIERYEARDEARRK 604
                                   TFELDYDGKRDRWNGYDPAT+ARVIERYEARDEARRK
Sbjct: 121  TNMHIAPDEKIE-----------TFELDYDGKRDRWNGYDPATYARVIERYEARDEARRK 169

Query: 603  YXXXXXXXXXXXKNSNPXXXXXXXXXXXXXXXXXXXXXEAKVDESKQMDFAKVEKRVRXX 424
            +           KN+                        AKVDESKQMDFAKVEKRVR  
Sbjct: 170  FLKEQQLKKLEEKNTKQNEDDEVSAEDEDEDDLKVDE--AKVDESKQMDFAKVEKRVRTT 227

Query: 423  XXXXXXTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDSDPNEKFYGGDNQYR 244
                  TVRNLRIREDTAKYLLNLDVNSA+YDPKTRSMREDPLPD DPNEKFY GDNQYR
Sbjct: 228  GGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDVDPNEKFYEGDNQYR 287

Query: 243  TSGQAMEFKQLNVHAWEAYEKGQDVHMQAAPSQAELLYKNYXXXXXXXXXXXXXTIMEKY 64
             SGQA++FKQLNVHAWEA++KGQD+HMQAAPSQAELLYKNY              IMEKY
Sbjct: 288  ISGQALDFKQLNVHAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSHTKDAIMEKY 347

Query: 63   GNAAAEEEIPKELLLGQSEKQ 1
            GNAA EE++P+ELLLGQSE+Q
Sbjct: 348  GNAADEEQLPRELLLGQSERQ 368


>ref|XP_003552180.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Glycine max]
          Length = 540

 Score =  495 bits (1274), Expect = e-137
 Identities = 258/383 (67%), Positives = 278/383 (72%), Gaps = 2/383 (0%)
 Frame = -3

Query: 1143 MATASMAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 964
            MATAS+AFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 963  SLKHQRKWKSDPNYTKAWYDRGAKVHQAEKYRKGACENCGAXXXXXXXXXXXXXXXXXXX 784
            SLKHQRKWKSDPNYTK+WYDRGAK+ QA+KYRKGACENCGA                   
Sbjct: 61   SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKSCMERPRRVGAKW 120

Query: 783  XXXXXXXXXXXXXXXXXXXXXXXTFELDYDGKRDRWNGYDPATFARVIERYEARDEARRK 604
                                   TFELDYDGKRDRWNGYD +T+ARVIERYEARDEAR+K
Sbjct: 121  TNKHIAPDEKIE-----------TFELDYDGKRDRWNGYDASTYARVIERYEARDEARKK 169

Query: 603  YXXXXXXXXXXXKNSN--PXXXXXXXXXXXXXXXXXXXXXEAKVDESKQMDFAKVEKRVR 430
            Y            N N                        EAKVDESKQMDFAKVEKRVR
Sbjct: 170  YLKEQQLKKLEKSNQNGEDAASDEEEEEDEDEDEDDLRVDEAKVDESKQMDFAKVEKRVR 229

Query: 429  XXXXXXXXTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDSDPNEKFYGGDNQ 250
                    TVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPD+DPNEKFY GDNQ
Sbjct: 230  TTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQ 289

Query: 249  YRTSGQAMEFKQLNVHAWEAYEKGQDVHMQAAPSQAELLYKNYXXXXXXXXXXXXXTIME 70
            YR SGQA+EFK+LN+HAWEA++KGQDVHMQAAPSQAELLYKN+             TI+E
Sbjct: 290  YRNSGQALEFKELNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKYQTKETIIE 349

Query: 69   KYGNAAAEEEIPKELLLGQSEKQ 1
            KYGNAA E+++P+ELLLGQSE+Q
Sbjct: 350  KYGNAADEDKLPRELLLGQSERQ 372


>ref|XP_003529103.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Glycine max]
          Length = 540

 Score =  495 bits (1274), Expect = e-137
 Identities = 258/383 (67%), Positives = 278/383 (72%), Gaps = 2/383 (0%)
 Frame = -3

Query: 1143 MATASMAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 964
            MATAS+AFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1    MATASVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 963  SLKHQRKWKSDPNYTKAWYDRGAKVHQAEKYRKGACENCGAXXXXXXXXXXXXXXXXXXX 784
            SLKHQRKWKSDPNYTK+WYDRGAK+ QA+KYRKGACENCGA                   
Sbjct: 61   SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKSCMERPRRVGAKW 120

Query: 783  XXXXXXXXXXXXXXXXXXXXXXXTFELDYDGKRDRWNGYDPATFARVIERYEARDEARRK 604
                                   TFELDYDGKRDRWNGYD +T+ARVIERYEARDEAR+K
Sbjct: 121  TNKHIAPDEKIE-----------TFELDYDGKRDRWNGYDASTYARVIERYEARDEARKK 169

Query: 603  YXXXXXXXXXXXKNSN--PXXXXXXXXXXXXXXXXXXXXXEAKVDESKQMDFAKVEKRVR 430
            Y            N N                        EAKVDESKQMDFAKVEKRVR
Sbjct: 170  YLKEQQLKKLEKSNQNGEDAASDGDEEEEEDEDEDDLRVDEAKVDESKQMDFAKVEKRVR 229

Query: 429  XXXXXXXXTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDSDPNEKFYGGDNQ 250
                    TVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPD+DPNEKFY GDNQ
Sbjct: 230  TTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQ 289

Query: 249  YRTSGQAMEFKQLNVHAWEAYEKGQDVHMQAAPSQAELLYKNYXXXXXXXXXXXXXTIME 70
            YR SGQA+EFK+LN+HAWEA++KGQDVHMQAAPSQAELLYKN+             TI+E
Sbjct: 290  YRNSGQALEFKELNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKYQTKETIIE 349

Query: 69   KYGNAAAEEEIPKELLLGQSEKQ 1
            KYGNAA E+++P+ELLLGQSE+Q
Sbjct: 350  KYGNAADEDKLPRELLLGQSERQ 372


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