BLASTX nr result

ID: Coptis25_contig00001627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001627
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92784.1| unknown [Populus trichocarpa]                          263   2e-68
ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   262   5e-68
gb|ABK93224.1| unknown [Populus trichocarpa]                          262   5e-68
dbj|BAF46352.1| alpha chain of nascent polypeptide associated co...   260   2e-67
gb|ACB32231.1| nascent polypeptide associated complex alpha [Sol...   259   2e-67

>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  263 bits (673), Expect = 2e-68
 Identities = 141/156 (90%), Positives = 148/156 (94%), Gaps = 1/156 (0%)
 Frame = -3

Query: 576 AEGQL-ADGSRSNKQSRSEKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKS 400
           AEGQ   D S  +KQSRSEKKSRKAMLKLGMK+IPGVSRVTVKKSKNILFVISKPDVFKS
Sbjct: 48  AEGQQDGDASGRSKQSRSEKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKS 107

Query: 399 PTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEP 220
           PTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLS+VISKPE+SA+AQDDE+VDETGVEP
Sbjct: 108 PTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAVAQDDEEVDETGVEP 167

Query: 219 KDIELVMTQAGVSRSKAVKALTTANGDIVSAIMDLT 112
           KDIELVMTQAGVSRSKAVKAL  A+GDIVSAIMDLT
Sbjct: 168 KDIELVMTQAGVSRSKAVKALKAADGDIVSAIMDLT 203


>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  262 bits (669), Expect = 5e-68
 Identities = 138/153 (90%), Positives = 145/153 (94%)
 Frame = -3

Query: 567 QLADGSRSNKQSRSEKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSD 388
           Q  D S  +KQSRSEKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSD
Sbjct: 50  QGGDASGRSKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSD 109

Query: 387 TYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIE 208
           TYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVI+KPE+S++AQDDEDVDETGVEPKDIE
Sbjct: 110 TYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVIAKPEASSMAQDDEDVDETGVEPKDIE 169

Query: 207 LVMTQAGVSRSKAVKALTTANGDIVSAIMDLTN 109
           LVMTQAGVSRSKAVKAL  A+GDIVSAIM+LTN
Sbjct: 170 LVMTQAGVSRSKAVKALKAADGDIVSAIMELTN 202


>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  262 bits (669), Expect = 5e-68
 Identities = 141/157 (89%), Positives = 148/157 (94%), Gaps = 1/157 (0%)
 Frame = -3

Query: 576 AEGQL-ADGSRSNKQSRSEKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKS 400
           AEGQ   D    +KQSRSEKKSRKAMLKLGMK+IPGVSRVTVKKSKNILFVISKPDVFKS
Sbjct: 49  AEGQQDGDVGGRSKQSRSEKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKS 108

Query: 399 PTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEP 220
           PTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLS+VISKPE+SAIAQDDE+VDETGVEP
Sbjct: 109 PTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDETGVEP 168

Query: 219 KDIELVMTQAGVSRSKAVKALTTANGDIVSAIMDLTN 109
           KDIELVMTQAGVSRSKAVKAL  A+GDIVSAIM+LTN
Sbjct: 169 KDIELVMTQAGVSRSKAVKALKAADGDIVSAIMELTN 205


>dbj|BAF46352.1| alpha chain of nascent polypeptide associated complex [Nicotiana
           benthamiana]
          Length = 201

 Score =  260 bits (664), Expect = 2e-67
 Identities = 136/152 (89%), Positives = 143/152 (94%)
 Frame = -3

Query: 564 LADGSRSNKQSRSEKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSDT 385
           L DGS  +KQSRSEKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSP SDT
Sbjct: 50  LGDGSGRSKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDT 109

Query: 384 YVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIEL 205
           YVIFGEAKIEDLSSQLQTQAAEQFKAP+LSNVISKPE S +AQDDEDVD+TGVEPKDIEL
Sbjct: 110 YVIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDDTGVEPKDIEL 169

Query: 204 VMTQAGVSRSKAVKALTTANGDIVSAIMDLTN 109
           VMTQAGVSR+KAVKAL  A+GDIVSAIM+LTN
Sbjct: 170 VMTQAGVSRAKAVKALKAADGDIVSAIMELTN 201


>gb|ACB32231.1| nascent polypeptide associated complex alpha [Solanum chacoense]
          Length = 199

 Score =  259 bits (663), Expect = 2e-67
 Identities = 135/153 (88%), Positives = 144/153 (94%)
 Frame = -3

Query: 567 QLADGSRSNKQSRSEKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSD 388
           +L DGS  +KQSRSEKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSP SD
Sbjct: 47  ELGDGSGRSKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSD 106

Query: 387 TYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIE 208
           TYVIFGEAKIEDLSSQLQ+QAAEQFKAP+LSNVISKPE S +AQDDEDVDETGVEPKDIE
Sbjct: 107 TYVIFGEAKIEDLSSQLQSQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDETGVEPKDIE 166

Query: 207 LVMTQAGVSRSKAVKALTTANGDIVSAIMDLTN 109
           LVMTQAGVSR+KAVKAL  A+GDIVSAIM++TN
Sbjct: 167 LVMTQAGVSRAKAVKALRAADGDIVSAIMEITN 199


Top