BLASTX nr result
ID: Coptis25_contig00001617
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001617
(1688 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati... 601 e-169
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ... 592 e-166
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ... 583 e-164
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ... 582 e-164
ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|2... 575 e-161
>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
subunit S3, putative [Ricinus communis]
Length = 427
Score = 601 bits (1550), Expect = e-169
Identities = 299/426 (70%), Positives = 355/426 (83%), Gaps = 1/426 (0%)
Frame = -3
Query: 1668 SDSDMEPLIAQIHELSTSPDQFFRLNDLLKQSQDSLHSQA-SQLAPHLHQLHPSNHSLGY 1492
+ +E L+ QI LS+S L++ LKQ+ DSLHS + ++L P L QL PS HSLGY
Sbjct: 2 NSGSIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGY 61
Query: 1491 LYFLEAYTGAALSKEQSVELVPVVATFITTCSEEQIRLATDKFISVCKRFKDELMSLRTP 1312
LYFLEA T +SKEQ+ LV ++A F+T+C+ +QIRLA DKFISVCKRFKD++M L P
Sbjct: 62 LYFLEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEP 121
Query: 1311 IRGIAPLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFL 1132
+RG+APL A+RKLQSS LTTLHP+FL LCLL+KCYK+GL ILE+DIFE+DQP+D FL
Sbjct: 122 MRGVAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFL 181
Query: 1131 YCYYGGMICVGEKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLP 952
Y YYGGM+C+G+K +RKA+ELLHNVVTAPMSS NAIAVEA+KKYIL SLI+ GQ STSLP
Sbjct: 182 YSYYGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQGQFSTSLP 241
Query: 951 KYISPTGQRNLRNYCQTYYDLANSYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSL 772
KY S QRNL+N+CQ Y +LANSYSTGK +E+E+ V +R+ F+SDNNLGLVKQVVSS+
Sbjct: 242 KYASSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLVKQVVSSM 301
Query: 771 SKRNIQRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIYATINQKDGMVSFHE 592
KRNIQRLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEIYATINQKDGMV F E
Sbjct: 302 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLE 361
Query: 591 DPEQYKTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSG 412
DPEQYKTCEMIEHIDSSIQRIM LSKKL+A+DEL+SCDP Y+ KA RER RF+FDD+D+
Sbjct: 362 DPEQYKTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRERQRFDFDDFDTV 421
Query: 411 PQRFNM 394
PQ+FN+
Sbjct: 422 PQKFNI 427
>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
gi|296090247|emb|CBI40066.3| unnamed protein product
[Vitis vinifera]
Length = 424
Score = 592 bits (1526), Expect = e-166
Identities = 291/421 (69%), Positives = 347/421 (82%)
Frame = -3
Query: 1656 MEPLIAQIHELSTSPDQFFRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 1477
+E ++ QI LS L+ LLKQ+ D LH+++++LAP L QL PS H+LGYLY LE
Sbjct: 4 VEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPSIHTLGYLYLLE 63
Query: 1476 AYTGAALSKEQSVELVPVVATFITTCSEEQIRLATDKFISVCKRFKDELMSLRTPIRGIA 1297
A T + KEQ+ +LV +A FI CS EQI LA DKF+S+CKR KD+++ L P+RG+A
Sbjct: 64 ACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAPMRGVA 123
Query: 1296 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 1117
P+ A+RKLQS+ E LT LHPDFLLLCLLAKCYK+GL ILE+DIFE+DQP+DFFLYCYYG
Sbjct: 124 PMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFLYCYYG 183
Query: 1116 GMICVGEKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 937
GMIC+G+K +RKA+ELLHNVVTAPMS+ NAIAVEA+KKYILVSLI++GQ ST+ PKY S
Sbjct: 184 GMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNGQFSTTFPKYTSS 243
Query: 936 TGQRNLRNYCQTYYDLANSYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 757
QRNL+N+ Q Y DLANSYS+GK SE E + +R+ F++D NLGLVKQVVSS+ KRNI
Sbjct: 244 VAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADKNLGLVKQVVSSMYKRNI 303
Query: 756 QRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 577
QRLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEI+ATINQKDGMV F EDPEQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFQEDPEQY 363
Query: 576 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 397
KTCEMIEHIDSSIQRIMTLSKKL+ +DELISCDP Y+ KA RER RF+FDDYD+ PQ+FN
Sbjct: 364 KTCEMIEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRERQRFDFDDYDTVPQKFN 423
Query: 396 M 394
+
Sbjct: 424 I 424
>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1 [Glycine
max]
Length = 423
Score = 583 bits (1504), Expect = e-164
Identities = 292/421 (69%), Positives = 348/421 (82%)
Frame = -3
Query: 1656 MEPLIAQIHELSTSPDQFFRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 1477
+E L+AQI LS+SP RL+ +LKQ+ DSL S++++LAP L QL PS HSLG+LY LE
Sbjct: 4 LEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLYILE 63
Query: 1476 AYTGAALSKEQSVELVPVVATFITTCSEEQIRLATDKFISVCKRFKDELMSLRTPIRGIA 1297
A ++K Q+ +VP+V FI CS EQIRLA DKF+SVCKR KD++M L PIRG+A
Sbjct: 64 ASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCKRLKDQVMLLEAPIRGVA 123
Query: 1296 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 1117
PL A+RKLQ+S E LT LH +FLLLCLLAKCYK+GL IL++D+FE+DQP+D FLYCYYG
Sbjct: 124 PLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYCYYG 183
Query: 1116 GMICVGEKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 937
GMIC+G+K ++KA++LLHNVVTAPMS+ NAIAVEA+KKYILVSLI GQ STSLPKY S
Sbjct: 184 GMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKYSSS 243
Query: 936 TGQRNLRNYCQTYYDLANSYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 757
T QRNL+N+CQ Y +LANSY TGK +E+E+ V + + F+SDNNLGLVKQVVSS+ KRNI
Sbjct: 244 TAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSMYKRNI 303
Query: 756 QRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 577
QRLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEIYATINQKDGMV F EDPEQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQY 363
Query: 576 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 397
KTCEMIEHIDSSIQRIM LS+KL+A DE ISCD Y+ KA RER R++FDD+D PQ+FN
Sbjct: 364 KTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFDV-PQKFN 422
Query: 396 M 394
+
Sbjct: 423 V 423
>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2 [Glycine
max]
Length = 423
Score = 582 bits (1501), Expect = e-164
Identities = 291/421 (69%), Positives = 348/421 (82%)
Frame = -3
Query: 1656 MEPLIAQIHELSTSPDQFFRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 1477
+E L+AQI LS+SP RL+ +LKQ+ DSL S++++LAP L QL PS HSLG+LY LE
Sbjct: 4 LEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLYILE 63
Query: 1476 AYTGAALSKEQSVELVPVVATFITTCSEEQIRLATDKFISVCKRFKDELMSLRTPIRGIA 1297
A ++K Q+ +VP+V FI CS EQIRLA DKF+SVC+R KD++M L PIRG+A
Sbjct: 64 ASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCRRLKDQVMLLEAPIRGVA 123
Query: 1296 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 1117
PL A+RKLQ+S E LT LH +FLLLCLLAKCYK+GL IL++D+FE+DQP+D FLYCYYG
Sbjct: 124 PLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYCYYG 183
Query: 1116 GMICVGEKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 937
GMIC+G+K ++KA++LLHNVVTAPMS+ NAIAVEA+KKYILVSLI GQ STSLPKY S
Sbjct: 184 GMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKYSSS 243
Query: 936 TGQRNLRNYCQTYYDLANSYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 757
T QRNL+N+CQ Y +LANSY TGK +E+E+ V + + F+SDNNLGLVKQVVSS+ KRNI
Sbjct: 244 TAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSMYKRNI 303
Query: 756 QRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 577
QRLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEIYATINQKDGMV F EDPEQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQY 363
Query: 576 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 397
KTCEMIEHIDSSIQRIM LS+KL+A DE ISCD Y+ KA RER R++FDD+D PQ+FN
Sbjct: 364 KTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFDV-PQKFN 422
Query: 396 M 394
+
Sbjct: 423 V 423
>ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|222847349|gb|EEE84896.1|
predicted protein [Populus trichocarpa]
Length = 423
Score = 575 bits (1481), Expect = e-161
Identities = 285/421 (67%), Positives = 346/421 (82%)
Frame = -3
Query: 1656 MEPLIAQIHELSTSPDQFFRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 1477
+E L+AQI LS+S L LKQ+ + LH+++++L P L QL P+ HSLGYLY LE
Sbjct: 4 VESLVAQIQGLSSSAGDLSLLLTHLKQADEFLHNESTRLLPFLEQLDPTLHSLGYLYILE 63
Query: 1476 AYTGAALSKEQSVELVPVVATFITTCSEEQIRLATDKFISVCKRFKDELMSLRTPIRGIA 1297
A T ++ +Q+ LV +++ F+T+C +QIRLA +KFI+VCK FKD+++ L PIRG+
Sbjct: 64 ACTSWPVTNDQARRLVLILSRFLTSCVADQIRLAPEKFIAVCKSFKDQVLMLEAPIRGVV 123
Query: 1296 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 1117
PL A++KL+SS E LTTLHPDFL LCLLAKCYK+GL ILE+DIFE+DQP+DF+LYCYYG
Sbjct: 124 PLLEAVKKLRSS-EHLTTLHPDFLQLCLLAKCYKTGLSILEDDIFEVDQPRDFYLYCYYG 182
Query: 1116 GMICVGEKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 937
GMIC+G+K ++KA+ELLHNVVTAPMSS NAIAVEA KKY+LVSLIY+GQ STSLPKY S
Sbjct: 183 GMICIGQKRFQKALELLHNVVTAPMSSINAIAVEAFKKYVLVSLIYNGQFSTSLPKYTSS 242
Query: 936 TGQRNLRNYCQTYYDLANSYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 757
QRNL+ CQ Y +LAN+YS GK SE+E + +R+ F SDNNLGLVKQVV+S+ KRNI
Sbjct: 243 AAQRNLKTICQPYIELANTYSIGKISELEPYIQTNREKFDSDNNLGLVKQVVTSMYKRNI 302
Query: 756 QRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 577
QRLTQTYLTLSLQDIAN VQL++ KEAEMHVLQMIQDGEIYATINQ+DGMV F EDPEQY
Sbjct: 303 QRLTQTYLTLSLQDIANTVQLSSPKEAEMHVLQMIQDGEIYATINQRDGMVRFLEDPEQY 362
Query: 576 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 397
KTCEMIEHIDSSIQRIMTLSKKL+A+DELISCDP Y+ K RER RF+FDD+D PQ+FN
Sbjct: 363 KTCEMIEHIDSSIQRIMTLSKKLTAMDELISCDPLYLAKVGRERQRFDFDDFDPVPQKFN 422
Query: 396 M 394
+
Sbjct: 423 I 423