BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001609
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin...   134   9e-30
ref|XP_002300392.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
emb|CBI34862.3| unnamed protein product [Vitis vinifera]              132   4e-29
emb|CBI39777.3| unnamed protein product [Vitis vinifera]              131   6e-29
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   131   6e-29

>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
           [Cucumis sativus] gi|449496860|ref|XP_004160246.1|
           PREDICTED: nuclear polyadenylated RNA-binding protein
           4-like [Cucumis sativus]
          Length = 347

 Score =  134 bits (337), Expect = 9e-30
 Identities = 68/98 (69%), Positives = 72/98 (73%)
 Frame = -2

Query: 296 HPHTGDGASPGKIFIGGLAKETTPXXXXXXXXXXXXXXXXXXXXXXVQFNKHFGKYGEIT 117
           +PHTGDGASPGKIFIGGLAK+TT                        QFNKHFG YGEIT
Sbjct: 9   NPHTGDGASPGKIFIGGLAKDTT----------------------YTQFNKHFGNYGEIT 46

Query: 116 DSVIMKDRKSGQPRGFGFVTYADPSVVDKVIEDTHVIN 3
           DSVIMKDR +GQPRGFGF+TYADPSVVDKVIEDTHVIN
Sbjct: 47  DSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIN 84


>ref|XP_002300392.1| predicted protein [Populus trichocarpa] gi|222847650|gb|EEE85197.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/98 (69%), Positives = 72/98 (73%)
 Frame = -2

Query: 296 HPHTGDGASPGKIFIGGLAKETTPXXXXXXXXXXXXXXXXXXXXXXVQFNKHFGKYGEIT 117
           +PHTGDGASPGKIFIGGLAK+TT                         FNKHFGKYGEIT
Sbjct: 9   NPHTGDGASPGKIFIGGLAKDTT----------------------YATFNKHFGKYGEIT 46

Query: 116 DSVIMKDRKSGQPRGFGFVTYADPSVVDKVIEDTHVIN 3
           DSVIMKDR +GQPRGFGF+TYADPSVVDKVIEDTHVIN
Sbjct: 47  DSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIN 84


>emb|CBI34862.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  132 bits (332), Expect = 4e-29
 Identities = 69/100 (69%), Positives = 73/100 (73%)
 Frame = -2

Query: 302 KFHPHTGDGASPGKIFIGGLAKETTPXXXXXXXXXXXXXXXXXXXXXXVQFNKHFGKYGE 123
           K HPHTGDGASPGKIFIGGLA+ETT                        QF KHFGKYGE
Sbjct: 29  KPHPHTGDGASPGKIFIGGLARETTS----------------------AQFIKHFGKYGE 66

Query: 122 ITDSVIMKDRKSGQPRGFGFVTYADPSVVDKVIEDTHVIN 3
           ITDSVIMKDRK+GQPRGFGFVTYAD SVVD+VI+DTHVIN
Sbjct: 67  ITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVIN 106


>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  131 bits (330), Expect = 6e-29
 Identities = 66/98 (67%), Positives = 72/98 (73%)
 Frame = -2

Query: 296 HPHTGDGASPGKIFIGGLAKETTPXXXXXXXXXXXXXXXXXXXXXXVQFNKHFGKYGEIT 117
           +PHTGDGASPGKIFIGGLAK+TT                         FNKHFGKYG+IT
Sbjct: 9   NPHTGDGASPGKIFIGGLAKDTT----------------------YATFNKHFGKYGDIT 46

Query: 116 DSVIMKDRKSGQPRGFGFVTYADPSVVDKVIEDTHVIN 3
           DSVIMKDR +GQPRGFGF+TYADPSVVD+VIEDTHVIN
Sbjct: 47  DSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN 84


>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
           vinifera] gi|147768836|emb|CAN78130.1| hypothetical
           protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  131 bits (330), Expect = 6e-29
 Identities = 66/98 (67%), Positives = 72/98 (73%)
 Frame = -2

Query: 296 HPHTGDGASPGKIFIGGLAKETTPXXXXXXXXXXXXXXXXXXXXXXVQFNKHFGKYGEIT 117
           +PHTGDGASPGKIFIGGLAK+TT                         FNKHFGKYG+IT
Sbjct: 9   NPHTGDGASPGKIFIGGLAKDTT----------------------YATFNKHFGKYGDIT 46

Query: 116 DSVIMKDRKSGQPRGFGFVTYADPSVVDKVIEDTHVIN 3
           DSVIMKDR +GQPRGFGF+TYADPSVVD+VIEDTHVIN
Sbjct: 47  DSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN 84