BLASTX nr result

ID: Coptis25_contig00001605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001605
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31915.3| unnamed protein product [Vitis vinifera]              111   1e-22
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...   111   1e-22
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]   110   2e-22
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   108   1e-21
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...   106   4e-21

>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  111 bits (278), Expect = 1e-22
 Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 14/225 (6%)
 Frame = +3

Query: 3   KLPFDLTTPMPSPQDQLSKLCGTTLICISMGFFLPSVLDMEGSELFVNMASLTILXXXXX 182
           KL  DL T MP  QDQLSKL  T ++C  MG F+PS+  ME  E+F N+ +L IL     
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLM 133

Query: 183 XNTCIQIATGVIFSVFFIEH-----------XXXXXXXXXXXXXXWYFTLYSSFLANVIR 329
            N CIQ+ TGVI+ V++ EH                          YF L       +  
Sbjct: 134 VNVCIQMGTGVIY-VYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELKYRKKYEIAV 192

Query: 330 GNNWGKGDVGLSYRGRLELI-YNIFAIYNY-QVRVCSIAHYPAVGLLCTISPLVFLEVAF 503
             +  + D+ +  + R +L+ Y I A  +  Q  +       A G LC +S  + +E   
Sbjct: 193 KESSNETDIPVFKKLREDLMKYWIMAHSSCPQFVIGRSVTCTASGALCLLSAAILVEAWI 252

Query: 504 RTFFLK-HLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFRWF 635
           R++ +    +FC G SDYKWSV+++L+SQ + + +GT+   FRWF
Sbjct: 253 RSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRWF 297


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score =  111 bits (278), Expect = 1e-22
 Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 14/225 (6%)
 Frame = +3

Query: 3   KLPFDLTTPMPSPQDQLSKLCGTTLICISMGFFLPSVLDMEGSELFVNMASLTILXXXXX 182
           KL  DL T MP  QDQLSKL  T ++C  MG F+PS+  ME  E+F N+ +L IL     
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLM 133

Query: 183 XNTCIQIATGVIFSVFFIEH-----------XXXXXXXXXXXXXXWYFTLYSSFLANVIR 329
            N CIQ+ TGVI+ V++ EH                          YF L       +  
Sbjct: 134 VNVCIQMGTGVIY-VYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELKYRKKYEIAV 192

Query: 330 GNNWGKGDVGLSYRGRLELI-YNIFAIYNY-QVRVCSIAHYPAVGLLCTISPLVFLEVAF 503
             +  + D+ +  + R +L+ Y I A  +  Q  +       A G LC +S  + +E   
Sbjct: 193 KESSNETDIPVFKKLREDLMKYWIMAHSSCPQFVIGRSVTCTASGALCLLSAAILVEAWI 252

Query: 504 RTFFLK-HLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFRWF 635
           R++ +    +FC G SDYKWSV+++L+SQ + + +GT+   FRWF
Sbjct: 253 RSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRWF 297


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score =  110 bits (276), Expect = 2e-22
 Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
 Frame = +3

Query: 3   KLPFDLTTPMPSPQDQLSKLCGTTLICISMGFFLPSVLDMEGSELFVNMASLTILXXXXX 182
           KL  DL T MP  QDQLSKL  T  +C  MG F+PS+  ME  E+F N+ +L IL     
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLM 133

Query: 183 XNTCIQIATGVIFSVFFIEH-----------XXXXXXXXXXXXXXWYFTLYSSFLANVIR 329
            N CIQ+ TGVI+ V++ EH                          YF L       +  
Sbjct: 134 VNVCIQMGTGVIY-VYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELKYRKKYEIAV 192

Query: 330 GNNWGKGDVGLSYRGRLELI-YNIFAIYNY-QVRVCSIAHYPAVGLLCTISPLVFLEVAF 503
             +  + D+ +  + R +L+ Y I A  +  Q  +       A G LC +S  + +E   
Sbjct: 193 KESSNETDIPVFKKLREDLMKYWIMAHSSXPQFVIGRSVTCTASGALCLLSAAILVEAWI 252

Query: 504 RTFFLK-HLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFRWF 635
           R++ +    +FC G SDYKWSV+++L+SQ + + +GT+   FRWF
Sbjct: 253 RSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRWF 297


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score =  108 bits (269), Expect = 1e-21
 Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 22/259 (8%)
 Frame = +3

Query: 3   KLPFDLTTPMPSPQDQLSKLCGTTLICISMGFFLPSVLDMEGSELFVNMASLTILXXXXX 182
           KL  DL T MPS QDQL+KL  T  +C  MG  +PS+  M+ ++L +N+ +L IL     
Sbjct: 74  KLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVITDV 133

Query: 183 XNTCIQIATGVIFSVFFIEHXXXXXXXXXXXXXXWYFTLYSSFLANVIRGNNWGKGDVGL 362
            N CIQ+ TG I+ VF  EH               +          ++      + DV +
Sbjct: 134 VNICIQLGTGAIY-VFSEEHFLVVLLMLLMLMILCFSATTVPTTKRILESKYNKRYDVAM 192

Query: 363 ------------SYRGRLELIYNIFAIYNYQVRVCSIAHYPAVGLLCTISPLVFLEVAFR 506
                         +  L   + +    + Q  +       A G  C +S +   E   R
Sbjct: 193 KCPLATERTVAKKIQQDLSKFWMMAHTSSPQFVMARSVTCTASGFFCLLSAITLGEAMVR 252

Query: 507 TFFL--KHLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFRWFSVASQLNPFKPEE-- 674
           ++FL  + L FC G SDYKWS S+VLV Q  T+ +GT+A   RWF+  +   P + ++  
Sbjct: 253 SYFLRPRSLGFCHGDSDYKWSTSLVLVCQTTTVAIGTIAPAIRWFTAVNFRCPIRGKKYY 312

Query: 675 ------DAPWIEWSCDRFQ 713
                 ++ W  W  ++ Q
Sbjct: 313 RDEFRIESYWTHWFSEKKQ 331


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  106 bits (265), Expect = 4e-21
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 22/259 (8%)
 Frame = +3

Query: 3   KLPFDLTTPMPSPQDQLSKLCGTTLICISMGFFLPSVLDMEGSELFVNMASLTILXXXXX 182
           KL  DL T MPS QDQL+KL  T  +C  MG  +PS+  M+ ++L +N+ +L IL     
Sbjct: 74  KLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVITDV 133

Query: 183 XNTCIQIATGVIFSVFFIEHXXXXXXXXXXXXXXWYFTLYSSFLANVIRGNNWGKGDVGL 362
            N CIQ+ TG I+ VF  EH               +          ++      + DV +
Sbjct: 134 VNICIQLGTGAIY-VFSEEHFLVVLLMLLMLMILCFSATTVPTTKRILEAKYKKRYDVAM 192

Query: 363 ------------SYRGRLELIYNIFAIYNYQVRVCSIAHYPAVGLLCTISPLVFLEVAFR 506
                         +  L   + +    + Q  +       A G  C +S +   E   R
Sbjct: 193 KCPLATERTVAKKIQQDLSKFWMMAHTSSPQFVMARSVTCTASGFFCLLSAITLGEAMVR 252

Query: 507 TFFL--KHLRFCEGVSDYKWSVSIVLVSQIITLVLGTLAITFRWFSVASQLNPFKPEE-- 674
           ++FL  + L FC G SDYKWS S+VLV Q   + +GT+A   RWF+  +   P + ++  
Sbjct: 253 SYFLRPRSLGFCHGDSDYKWSTSLVLVCQTTAVTIGTIAPAIRWFTAVNFRCPIRGKKYY 312

Query: 675 ------DAPWIEWSCDRFQ 713
                 ++ W  W  ++ Q
Sbjct: 313 RDEFRVESYWTHWFSEKKQ 331


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