BLASTX nr result

ID: Coptis25_contig00001596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001596
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280297.1| PREDICTED: putative oxidoreductase GLYR1-lik...   547   e-153
emb|CBI35963.3| unnamed protein product [Vitis vinifera]              544   e-152
ref|XP_002521394.1| 3-hydroxyisobutyrate dehydrogenase, putative...   527   e-147
ref|NP_001233836.1| succinic semialdehyde reductase isofom2 [Sol...   525   e-146
ref|XP_004146816.1| PREDICTED: putative oxidoreductase GLYR1-lik...   523   e-146

>ref|XP_002280297.1| PREDICTED: putative oxidoreductase GLYR1-like [Vitis vinifera]
          Length = 365

 Score =  547 bits (1410), Expect = e-153
 Identities = 286/352 (81%), Positives = 314/352 (89%), Gaps = 5/352 (1%)
 Frame = -2

Query: 1350 ILASSITPSPTMSMCSTFLP-QIPSNFR-RNPFFSFPIKPLFSTCSKAFSSQS---SEEN 1186
            +L  S T S  M+MCS+F P Q+P++FR   P  SF  KP      KAFSSQ+   S ++
Sbjct: 12   LLNPSNTASLAMAMCSSFCPPQVPNHFRGTTPIPSFLPKP---PSFKAFSSQTATASTKD 68

Query: 1185 ESPARIGFLGLGIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVASSC 1006
            E PAR+GFLGLGIMGSPMAQNLIK+GCDVTVWNRTKSKCDPLISLGAKYKSSPEEVA+SC
Sbjct: 69   EFPARVGFLGLGIMGSPMAQNLIKSGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVAASC 128

Query: 1005 DVTFAMLADPESAVDVACGEYGVANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLE 826
            DVTFAMLADPESAVDVACG++G A+G+ PGKGYVDVSTVDGATSKLIG+ +KATGALFLE
Sbjct: 129  DVTFAMLADPESAVDVACGKHGAASGIGPGKGYVDVSTVDGATSKLIGEHIKATGALFLE 188

Query: 825  APVSGSKKPAEDGQLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIM 646
            APVSGSKKPAEDGQLIFLT GD++LYE VAP LDIMGKSRF+LG VGNGAAMKLVVNM+M
Sbjct: 189  APVSGSKKPAEDGQLIFLTGGDKSLYETVAPLLDIMGKSRFFLGSVGNGAAMKLVVNMVM 248

Query: 645  GSMMASFSEGLLLSKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQ 466
            GSMMASFSEGLLL +KVGLDP V+VEV+SQGAISAPMFSMKGPSMV++VYPTAFPLKHQQ
Sbjct: 249  GSMMASFSEGLLLGEKVGLDPDVIVEVISQGAISAPMFSMKGPSMVKSVYPTAFPLKHQQ 308

Query: 465  KDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQFQ 310
            KDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSD DFSAVIEALK + Q
Sbjct: 309  KDLRLALGLAESVSQPTPIAAAANELYKVAKSHGLSDHDFSAVIEALKVKMQ 360


>emb|CBI35963.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  544 bits (1401), Expect = e-152
 Identities = 282/341 (82%), Positives = 309/341 (90%), Gaps = 5/341 (1%)
 Frame = -2

Query: 1317 MSMCSTFLP-QIPSNFR-RNPFFSFPIKPLFSTCSKAFSSQS---SEENESPARIGFLGL 1153
            M+MCS+F P Q+P++FR   P  SF  KP      KAFSSQ+   S ++E PAR+GFLGL
Sbjct: 1    MAMCSSFCPPQVPNHFRGTTPIPSFLPKP---PSFKAFSSQTATASTKDEFPARVGFLGL 57

Query: 1152 GIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVASSCDVTFAMLADPE 973
            GIMGSPMAQNLIK+GCDVTVWNRTKSKCDPLISLGAKYKSSPEEVA+SCDVTFAMLADPE
Sbjct: 58   GIMGSPMAQNLIKSGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVAASCDVTFAMLADPE 117

Query: 972  SAVDVACGEYGVANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAE 793
            SAVDVACG++G A+G+ PGKGYVDVSTVDGATSKLIG+ +KATGALFLEAPVSGSKKPAE
Sbjct: 118  SAVDVACGKHGAASGIGPGKGYVDVSTVDGATSKLIGEHIKATGALFLEAPVSGSKKPAE 177

Query: 792  DGQLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMASFSEGL 613
            DGQLIFLT GD++LYE VAP LDIMGKSRF+LG VGNGAAMKLVVNM+MGSMMASFSEGL
Sbjct: 178  DGQLIFLTGGDKSLYETVAPLLDIMGKSRFFLGSVGNGAAMKLVVNMVMGSMMASFSEGL 237

Query: 612  LLSKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQKDLRLALGLAE 433
            LL +KVGLDP V+VEV+SQGAISAPMFSMKGPSMV++VYPTAFPLKHQQKDLRLALGLAE
Sbjct: 238  LLGEKVGLDPDVIVEVISQGAISAPMFSMKGPSMVKSVYPTAFPLKHQQKDLRLALGLAE 297

Query: 432  SVSQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQFQ 310
            SVSQPTPIAAAANELYKVAKSHGLSD DFSAVIEALK + Q
Sbjct: 298  SVSQPTPIAAAANELYKVAKSHGLSDHDFSAVIEALKVKMQ 338


>ref|XP_002521394.1| 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis]
            gi|223539472|gb|EEF41062.1| 3-hydroxyisobutyrate
            dehydrogenase, putative [Ricinus communis]
          Length = 348

 Score =  527 bits (1357), Expect = e-147
 Identities = 269/336 (80%), Positives = 299/336 (88%), Gaps = 1/336 (0%)
 Frame = -2

Query: 1314 SMCSTFLPQIPSNFRRNPFFSFPIKPLFSTCSKAFS-SQSSEENESPARIGFLGLGIMGS 1138
            +MCS+F PQ+PS+ R  P  SF  +  F    KAFS S S + + S  R+GFLG+GIMG+
Sbjct: 16   TMCSSFCPQLPSHLRAIPISSFLTRQSF----KAFSVSASVKADGSSTRVGFLGMGIMGT 71

Query: 1137 PMAQNLIKAGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVASSCDVTFAMLADPESAVDV 958
            PM QNLIKAGCDVTVWNRTKSKCDPLISLGAKY+ SPEEVA++ DVTFAMLADPESAV+V
Sbjct: 72   PMTQNLIKAGCDVTVWNRTKSKCDPLISLGAKYRPSPEEVAAASDVTFAMLADPESAVEV 131

Query: 957  ACGEYGVANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAEDGQLI 778
            ACG+ G A G+ PGKGYVDVSTVDG TSKLIG  +KATGA FLEAPVSGSKKPAEDGQLI
Sbjct: 132  ACGKNGAAGGMGPGKGYVDVSTVDGGTSKLIGGHIKATGASFLEAPVSGSKKPAEDGQLI 191

Query: 777  FLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMASFSEGLLLSKK 598
            FLTAGD+ LYE+VAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMA+FSEG+LL +K
Sbjct: 192  FLTAGDKPLYEIVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGILLGEK 251

Query: 597  VGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQKDLRLALGLAESVSQP 418
            VGLDP+V+VEVVSQGAISAPM+SMKGPSM++++YPTAFPLKHQQKDLRLALGLAESVSQP
Sbjct: 252  VGLDPNVIVEVVSQGAISAPMYSMKGPSMIKSIYPTAFPLKHQQKDLRLALGLAESVSQP 311

Query: 417  TPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQFQ 310
            TPIAAAANELYKVAKSHGLSD DFSAVIEALK + Q
Sbjct: 312  TPIAAAANELYKVAKSHGLSDSDFSAVIEALKVKLQ 347


>ref|NP_001233836.1| succinic semialdehyde reductase isofom2 [Solanum lycopersicum]
            gi|171854591|dbj|BAG16486.1| succinic semialdehyde
            reductase isofom2 [Solanum lycopersicum]
          Length = 363

 Score =  525 bits (1352), Expect = e-146
 Identities = 268/338 (79%), Positives = 298/338 (88%), Gaps = 3/338 (0%)
 Frame = -2

Query: 1317 MSMCSTFLPQIPSNFRRNPFFS-FPIKPLFSTCSKAFSSQSS--EENESPARIGFLGLGI 1147
            M+MCSTF P++  +       S FP+K  F    KAFSSQ+S  + ++ PA IGFLGLGI
Sbjct: 1    MAMCSTFCPRLSFHLNCKKSLSLFPVKHRFFVTIKAFSSQTSAPKADDLPASIGFLGLGI 60

Query: 1146 MGSPMAQNLIKAGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVASSCDVTFAMLADPESA 967
            MG+PMAQNLIKAGCDVTVWNRTKSKC+PLISLGAKYKSSPEEVA+SCDVTFAMLADPESA
Sbjct: 61   MGNPMAQNLIKAGCDVTVWNRTKSKCEPLISLGAKYKSSPEEVAASCDVTFAMLADPESA 120

Query: 966  VDVACGEYGVANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAEDG 787
             DVACG+YG A G+ PGKGYVD STVDG TSKLI + ++ATGA FLEAPVSGSKKPAEDG
Sbjct: 121  ADVACGKYGAAKGMGPGKGYVDASTVDGETSKLICEHIRATGAHFLEAPVSGSKKPAEDG 180

Query: 786  QLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMASFSEGLLL 607
            QLIFLTAGD  LY+  AP LDIMGKSRFYLG+VGNGAAMKLVVNM+MGSMMASF+EGL+L
Sbjct: 181  QLIFLTAGDSVLYDKAAPLLDIMGKSRFYLGEVGNGAAMKLVVNMVMGSMMASFAEGLVL 240

Query: 606  SKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQKDLRLALGLAESV 427
            S+KVGLDPSVLVEV+SQGAISAPM+++KGPSMV++ YPTAFPLKHQQKDLRLALGLAESV
Sbjct: 241  SEKVGLDPSVLVEVISQGAISAPMYAVKGPSMVKSSYPTAFPLKHQQKDLRLALGLAESV 300

Query: 426  SQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQF 313
            SQP PIAAA NELYKVAKSHGLSDQDFSAVIEALK +F
Sbjct: 301  SQPIPIAAATNELYKVAKSHGLSDQDFSAVIEALKVKF 338


>ref|XP_004146816.1| PREDICTED: putative oxidoreductase GLYR1-like [Cucumis sativus]
          Length = 356

 Score =  523 bits (1347), Expect = e-146
 Identities = 265/341 (77%), Positives = 300/341 (87%), Gaps = 2/341 (0%)
 Frame = -2

Query: 1326 SPTMSMCSTFLPQIPSNFRRNPFFSFPIKPLFSTCSKAFSSQSSEEN--ESPARIGFLGL 1153
            S  ++M S+F P +P +F   P F FP KP FS   K FS Q++  +  +   R+GFLGL
Sbjct: 15   STAIAMSSSFCPHLPLHFGTRPIFYFPTKPSFSLSFKPFSVQATNASSGKEELRVGFLGL 74

Query: 1152 GIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLISLGAKYKSSPEEVASSCDVTFAMLADPE 973
            GIMG+PMAQNLIK+GCDVTVWNRTKSKCDPLI+LGAKY+SSP+EVA+SCDVTFAMLADP 
Sbjct: 75   GIMGTPMAQNLIKSGCDVTVWNRTKSKCDPLINLGAKYQSSPQEVAASCDVTFAMLADPN 134

Query: 972  SAVDVACGEYGVANGLSPGKGYVDVSTVDGATSKLIGKQVKATGALFLEAPVSGSKKPAE 793
            SA++VACGE G A+G+SPGKGYVDVSTVD  TSKLI  ++K TGALFLEAPVSGSKKPAE
Sbjct: 135  SALEVACGENGAASGMSPGKGYVDVSTVDDTTSKLISARIKDTGALFLEAPVSGSKKPAE 194

Query: 792  DGQLIFLTAGDEALYEMVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMASFSEGL 613
            DGQLIFLTAGD++LYE VAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMA+FSEGL
Sbjct: 195  DGQLIFLTAGDKSLYETVAPFLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMAAFSEGL 254

Query: 612  LLSKKVGLDPSVLVEVVSQGAISAPMFSMKGPSMVQAVYPTAFPLKHQQKDLRLALGLAE 433
            LLS+KVGLDP+ +VEVVSQGAISAPM+ +KGP+M+++ YPTAFPLKHQQKDLRLALGLAE
Sbjct: 255  LLSEKVGLDPNDVVEVVSQGAISAPMYKLKGPAMIKSQYPTAFPLKHQQKDLRLALGLAE 314

Query: 432  SVSQPTPIAAAANELYKVAKSHGLSDQDFSAVIEALKPQFQ 310
            SVSQ TPIAAAANELYKVAKS GLSDQDFSAVIEALK + Q
Sbjct: 315  SVSQSTPIAAAANELYKVAKSRGLSDQDFSAVIEALKVKLQ 355


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