BLASTX nr result

ID: Coptis25_contig00001594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001594
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634145.1| PREDICTED: probable receptor-like protein ki...   114   6e-24
ref|XP_002279790.2| PREDICTED: probable receptor-like protein ki...   114   1e-23
emb|CAN76987.1| hypothetical protein VITISV_027948 [Vitis vinifera]   114   1e-23
emb|CBI23135.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002268653.1| PREDICTED: probable receptor-like protein ki...   113   1e-23

>ref|XP_003634145.1| PREDICTED: probable receptor-like protein kinase At5g39020-like
           [Vitis vinifera]
          Length = 558

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/132 (45%), Positives = 78/132 (59%)
 Frame = +3

Query: 3   FQPKVSDFGLAKALNKENSHISVTHPTGTPGYAPPEMWYVKLGQVTNKSDVYSFGMVVLE 182
           F PK+SDFGLAK  +KE S +S+T   GT GY  PE+     G V+ KSDVYSFGM++LE
Sbjct: 383 FNPKISDFGLAKLCSKEQSVVSMTAARGTMGYIAPEVLSRNFGNVSYKSDVYSFGMLLLE 442

Query: 183 MAGKRRNFEDDVSKTSEMYFPEWVFSHHVQNAYGDGGGSKWHECKGKXXXXXXXXXXXVG 362
           M G R+N +  +  TS+MYFPEW+++H  QN      G      + +           VG
Sbjct: 443 MVGGRKNSDAIMENTSQMYFPEWLYNHLEQN------GEIHIRIEKEEDTKIAKRLSIVG 496

Query: 363 LWCIQFEPSKRP 398
           LWCIQ+ P  RP
Sbjct: 497 LWCIQWHPIDRP 508


>ref|XP_002279790.2| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 681

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/132 (45%), Positives = 78/132 (59%)
 Frame = +3

Query: 3   FQPKVSDFGLAKALNKENSHISVTHPTGTPGYAPPEMWYVKLGQVTNKSDVYSFGMVVLE 182
           F PKVSDFGLAK   K+ S IS+    GTPGY  PE++Y  LG V+ KSDVYS+G++VLE
Sbjct: 516 FCPKVSDFGLAKLCTKKESMISMFDARGTPGYIAPEVFYRSLGGVSYKSDVYSYGVMVLE 575

Query: 183 MAGKRRNFEDDVSKTSEMYFPEWVFSHHVQNAYGDGGGSKWHECKGKXXXXXXXXXXXVG 362
           M G R+N +  V + SE+YFP W+++H   +  G  G         +           V 
Sbjct: 576 MVGGRKNIDVGVDRISEIYFPHWIYNHLELDELGLQG------LMSEEDRVNARKMIIVS 629

Query: 363 LWCIQFEPSKRP 398
           LWCIQ +PS RP
Sbjct: 630 LWCIQTKPSDRP 641


>emb|CAN76987.1| hypothetical protein VITISV_027948 [Vitis vinifera]
          Length = 620

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/132 (45%), Positives = 78/132 (59%)
 Frame = +3

Query: 3   FQPKVSDFGLAKALNKENSHISVTHPTGTPGYAPPEMWYVKLGQVTNKSDVYSFGMVVLE 182
           F PKVSDFGLAK   K+ S IS+    GTPGY  PE++Y  LG V+ KSDVYS+G++VLE
Sbjct: 455 FCPKVSDFGLAKLCTKKESMISMFDARGTPGYIAPEVFYRSLGGVSYKSDVYSYGVMVLE 514

Query: 183 MAGKRRNFEDDVSKTSEMYFPEWVFSHHVQNAYGDGGGSKWHECKGKXXXXXXXXXXXVG 362
           M G R+N +  V + SE+YFP W+++H   +  G  G         +           V 
Sbjct: 515 MVGGRKNIDVGVDRISEIYFPHWIYNHLELDELGLQG------LMSEEDRVNARKMIIVS 568

Query: 363 LWCIQFEPSKRP 398
           LWCIQ +PS RP
Sbjct: 569 LWCIQTKPSDRP 580


>emb|CBI23135.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3   FQPKVSDFGLAKALNKENSHISVTHPTGTPGYAPPEMWYVKLGQVTNKSDVYSFGMVVLE 182
           F PK+SDFGLAK  +KE S +S+T   GT GY  PE+     G +T KSDVYSFGM++LE
Sbjct: 318 FTPKISDFGLAKLCSKEQSVVSMTTARGTIGYIAPEVLSRNFGNITYKSDVYSFGMLLLE 377

Query: 183 MAGKRRNFEDDVSKTSEMYFPEWVFSHHVQNAYGDGGGSKWH-ECKGKXXXXXXXXXXXV 359
           M G R+N +  + KT ++YFPEWV++H  Q       G + H   + +           V
Sbjct: 378 MVGGRKNIDVTMEKTGQVYFPEWVYNHLDQ-------GEELHIRIEEEGDAKIAKKLTIV 430

Query: 360 GLWCIQFEPSKRP 398
           GLWCIQ+ P  RP
Sbjct: 431 GLWCIQWYPIDRP 443


>ref|XP_002268653.1| PREDICTED: probable receptor-like protein kinase At5g39020-like
           [Vitis vinifera]
          Length = 619

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3   FQPKVSDFGLAKALNKENSHISVTHPTGTPGYAPPEMWYVKLGQVTNKSDVYSFGMVVLE 182
           F PK+SDFGLAK  +KE S +S+T   GT GY  PE+     G +T KSDVYSFGM++LE
Sbjct: 437 FTPKISDFGLAKLCSKEQSVVSMTTARGTIGYIAPEVLSRNFGNITYKSDVYSFGMLLLE 496

Query: 183 MAGKRRNFEDDVSKTSEMYFPEWVFSHHVQNAYGDGGGSKWH-ECKGKXXXXXXXXXXXV 359
           M G R+N +  + KT ++YFPEWV++H  Q       G + H   + +           V
Sbjct: 497 MVGGRKNIDVTMEKTGQVYFPEWVYNHLDQ-------GEELHIRIEEEGDAKIAKKLTIV 549

Query: 360 GLWCIQFEPSKRP 398
           GLWCIQ+ P  RP
Sbjct: 550 GLWCIQWYPIDRP 562


Top