BLASTX nr result

ID: Coptis25_contig00001588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001588
         (1725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]   129   3e-41
ref|XP_002273015.1| PREDICTED: uncharacterized protein LOC100246...   128   6e-41
ref|XP_004148951.1| PREDICTED: uncharacterized protein LOC101219...   121   4e-40
ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arab...   124   5e-40
ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana] ...   124   5e-40

>emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]
          Length = 542

 Score =  129 bits (324), Expect(2) = 3e-41
 Identities = 63/83 (75%), Positives = 71/83 (85%)
 Frame = +2

Query: 1277 KDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRLGVLSCGSNSTIRAV 1456
            KDVDE F+AHINL VL+FGML SA+GSV+GC+FLMLSMVNVIEIRLG+LSCGS S + AV
Sbjct: 459  KDVDEAFRAHINLKVLRFGMLGSAVGSVLGCLFLMLSMVNVIEIRLGLLSCGSRSAVHAV 518

Query: 1457 ATLITLVSAGLVTYISTVVYAFM 1525
            A L+ LVS  LV YIST VYAFM
Sbjct: 519  AALVVLVSTALVVYISTAVYAFM 541



 Score = 67.8 bits (164), Expect(2) = 3e-41
 Identities = 35/45 (77%), Positives = 37/45 (82%)
 Frame = +3

Query: 1083 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRLL 1217
            DGLVNVNSLFTIAVFVGLSLTTP Q SLE +  CDA I  A+RLL
Sbjct: 385  DGLVNVNSLFTIAVFVGLSLTTPNQHSLENRAGCDAGIDVARRLL 429


>ref|XP_002273015.1| PREDICTED: uncharacterized protein LOC100246515 [Vitis vinifera]
            gi|359495402|ref|XP_003634982.1| PREDICTED:
            uncharacterized protein LOC100855266 [Vitis vinifera]
          Length = 194

 Score =  128 bits (321), Expect(2) = 6e-41
 Identities = 62/83 (74%), Positives = 72/83 (86%)
 Frame = +2

Query: 1277 KDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRLGVLSCGSNSTIRAV 1456
            KDVD+ F+AHINL VL+FGML SA+GSV+GC+FLMLSMVNVIEIRLG+LSCGS S + AV
Sbjct: 111  KDVDDAFRAHINLKVLRFGMLGSAVGSVLGCLFLMLSMVNVIEIRLGLLSCGSRSAVHAV 170

Query: 1457 ATLITLVSAGLVTYISTVVYAFM 1525
            A L+ LVS+ LV YIST VYAFM
Sbjct: 171  AALLVLVSSALVVYISTAVYAFM 193



 Score = 67.8 bits (164), Expect(2) = 6e-41
 Identities = 35/45 (77%), Positives = 37/45 (82%)
 Frame = +3

Query: 1083 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRLL 1217
            DGLVNVNSLFTIAVFVGLSLTTP Q SLE +  CDA I  A+RLL
Sbjct: 37   DGLVNVNSLFTIAVFVGLSLTTPNQHSLENRAGCDAGIDVARRLL 81


>ref|XP_004148951.1| PREDICTED: uncharacterized protein LOC101219594 [Cucumis sativus]
            gi|449502060|ref|XP_004161532.1| PREDICTED:
            uncharacterized LOC101219594 [Cucumis sativus]
          Length = 197

 Score =  121 bits (304), Expect(2) = 4e-40
 Identities = 58/83 (69%), Positives = 72/83 (86%)
 Frame = +2

Query: 1277 KDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRLGVLSCGSNSTIRAV 1456
            KDVDE F+AHINL VL+ GMLASAIGSV+GC+FLMLSMV+VI+IRLG+LSCGS S + AV
Sbjct: 114  KDVDEAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAV 173

Query: 1457 ATLITLVSAGLVTYISTVVYAFM 1525
            + L+ LVS+ L+ YIST +YAF+
Sbjct: 174  SALLVLVSSALLVYISTAIYAFL 196



 Score = 71.6 bits (174), Expect(2) = 4e-40
 Identities = 36/45 (80%), Positives = 38/45 (84%)
 Frame = +3

Query: 1083 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRLL 1217
            DGLVNVNSLFTIAVFVGLSLTTPGQ SLE   VCDA I  A++LL
Sbjct: 40   DGLVNVNSLFTIAVFVGLSLTTPGQHSLENSSVCDAGIDVARKLL 84


>ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arabidopsis lyrata subsp.
            lyrata] gi|297330492|gb|EFH60911.1| hypothetical protein
            ARALYDRAFT_478070 [Arabidopsis lyrata subsp. lyrata]
          Length = 189

 Score =  124 bits (311), Expect(2) = 5e-40
 Identities = 58/82 (70%), Positives = 75/82 (91%)
 Frame = +2

Query: 1277 KDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRLGVLSCGSNSTIRAV 1456
            KDV+E+F+AHIN+ VL++GM+ASA+GSV+GC+FLMLSMVNVI+IRLG+LSCGS S  +AV
Sbjct: 106  KDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAV 165

Query: 1457 ATLITLVSAGLVTYISTVVYAF 1522
            ATL+TLVS+ L+ YIST +YAF
Sbjct: 166  ATLVTLVSSALLIYISTAIYAF 187



 Score = 68.6 bits (166), Expect(2) = 5e-40
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +3

Query: 1083 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRLL 1217
            DGLVNVNSLFTIAVFVGLSL TPGQ SLE++  CDA    AK+LL
Sbjct: 32   DGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLL 76


>ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana]
            gi|145331996|ref|NP_001078120.1| uncharacterized protein
            [Arabidopsis thaliana]
            gi|13877549|gb|AAK43852.1|AF370475_1 Unknown protein
            [Arabidopsis thaliana] gi|20148735|gb|AAM10258.1| unknown
            protein [Arabidopsis thaliana]
            gi|332641030|gb|AEE74551.1| uncharacterized protein
            [Arabidopsis thaliana] gi|332641031|gb|AEE74552.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 189

 Score =  124 bits (311), Expect(2) = 5e-40
 Identities = 58/82 (70%), Positives = 75/82 (91%)
 Frame = +2

Query: 1277 KDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRLGVLSCGSNSTIRAV 1456
            KDV+E+F+AHIN+ VL++GM+ASA+GSV+GC+FLMLSMVNVI+IRLG+LSCGS S  +AV
Sbjct: 106  KDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAV 165

Query: 1457 ATLITLVSAGLVTYISTVVYAF 1522
            ATL+TLVS+ L+ YIST +YAF
Sbjct: 166  ATLVTLVSSALLIYISTAIYAF 187



 Score = 68.6 bits (166), Expect(2) = 5e-40
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +3

Query: 1083 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRLL 1217
            DGLVNVNSLFTIAVFVGLSL TPGQ SLE++  CDA    AK+LL
Sbjct: 32   DGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLL 76


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