BLASTX nr result
ID: Coptis25_contig00001587
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001587
(1076 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE75700.1| unknown [Picea sitchensis] 300 e-125
ref|XP_003556414.1| PREDICTED: T-complex protein 1 subunit gamma... 300 e-119
ref|XP_001762761.1| predicted protein [Physcomitrella patens sub... 273 e-110
ref|XP_001771736.1| predicted protein [Physcomitrella patens sub... 274 e-109
ref|XP_002974233.1| hypothetical protein SELMODRAFT_442408 [Sela... 271 e-107
>gb|ADE75700.1| unknown [Picea sitchensis]
Length = 556
Score = 300 bits (769), Expect(3) = e-125
Identities = 151/178 (84%), Positives = 164/178 (92%)
Frame = -1
Query: 1076 ELVKEEDWGVMLTMEEEYIENICAQILTFKSDLVITEKELSDLACHFLSKAGVSAIRRLR 897
EL++EEDWGV+L MEEEYIE IC QIL FK DLVITEK LSDLA H+LSKAGVSAIRRLR
Sbjct: 257 ELIREEDWGVLLKMEEEYIEKICMQILCFKPDLVITEKGLSDLAAHYLSKAGVSAIRRLR 316
Query: 896 KTDNNRIAKACGAVFVNRPEELQESDIGTTAGLFEVRKIGDEFFPFIVECKDPKACTVLL 717
KTDNNRIAKACGA VNRPEELQESD+GT AGLFEV+KIGDE+F +IVECKDPKACTVLL
Sbjct: 317 KTDNNRIAKACGATVVNRPEELQESDVGTGAGLFEVQKIGDEYFTYIVECKDPKACTVLL 376
Query: 716 RGASKDLLNEVEINLQDAMSVARNIIKYPKLVPGGGASELTVSATLKQKSSAIEGIEK 543
RGASKDLLNEV NLQDAMSVARN+IK PKLVPGGGA+ELTVSATLKQKSS++EGI+K
Sbjct: 377 RGASKDLLNEVGRNLQDAMSVARNMIKNPKLVPGGGATELTVSATLKQKSSSVEGIDK 434
Score = 156 bits (394), Expect(3) = e-125
Identities = 75/90 (83%), Positives = 81/90 (90%)
Frame = -3
Query: 546 KAAAIAFEAIPRTLAQNCGVNVIRTMTASQGQHANGENPWIGIDGSTGAITDMKENSIWD 367
+A A+AFEAIPRTLAQNCGVNVIRTMTA Q +HANGEN W GIDG+TGAITDMKE IWD
Sbjct: 438 EAVALAFEAIPRTLAQNCGVNVIRTMTALQAKHANGENVWTGIDGNTGAITDMKERGIWD 497
Query: 366 AYNVKAQTFKTAKEASCMLLEIDDIVSGIK 277
AYNVKAQTFKTA EA+CMLL IDD+VSGIK
Sbjct: 498 AYNVKAQTFKTAIEAACMLLRIDDVVSGIK 527
Score = 41.6 bits (96), Expect(3) = e-125
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -2
Query: 271 KKQPPGAGQGPSKPKVEEEGDVDSEQILPE 182
KKQ PG+ P+KP+VE+E DVDSEQ++PE
Sbjct: 528 KKQAPGSS-APAKPQVEDEKDVDSEQMIPE 556
>ref|XP_003556414.1| PREDICTED: T-complex protein 1 subunit gamma-like [Glycine max]
Length = 557
Score = 300 bits (767), Expect(2) = e-119
Identities = 149/178 (83%), Positives = 164/178 (92%)
Frame = -1
Query: 1076 ELVKEEDWGVMLTMEEEYIENICAQILTFKSDLVITEKELSDLACHFLSKAGVSAIRRLR 897
E++KEEDW ++L MEEEYIE +C QIL FK DLVITEK L+DLACHFLSK GVSAIRRLR
Sbjct: 257 EMLKEEDWSLLLRMEEEYIEELCMQILKFKPDLVITEKGLNDLACHFLSKHGVSAIRRLR 316
Query: 896 KTDNNRIAKACGAVFVNRPEELQESDIGTTAGLFEVRKIGDEFFPFIVECKDPKACTVLL 717
KTDNNRIAKACGAV VNRP+ELQESD+GT AGLFEV+KIGDEFF FIVECKDPKACTVLL
Sbjct: 317 KTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVECKDPKACTVLL 376
Query: 716 RGASKDLLNEVEINLQDAMSVARNIIKYPKLVPGGGASELTVSATLKQKSSAIEGIEK 543
RGASKDLLNEVE NLQDAMSVARNIIK KLVPGGGA+ELT+SATLKQKSS+++GI+K
Sbjct: 377 RGASKDLLNEVERNLQDAMSVARNIIKNSKLVPGGGATELTISATLKQKSSSVQGIQK 434
Score = 157 bits (398), Expect(2) = e-119
Identities = 81/112 (72%), Positives = 93/112 (83%)
Frame = -3
Query: 546 KAAAIAFEAIPRTLAQNCGVNVIRTMTASQGQHANGENPWIGIDGSTGAITDMKENSIWD 367
+AAAIAFEAIPRTLAQNCGVNVIRTMTA QG+HANGEN W+GI+G+TG ITDMKE IWD
Sbjct: 438 EAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWMGINGNTGDITDMKECKIWD 497
Query: 366 AYNVKAQTFKTAKEASCMLLEIDDIVSGIKN*RSNLLVQAKVHQSPKLRKKV 211
AYNVKAQTFKTA EA+CMLL IDD+VSGIK ++ QA+ PK+ +V
Sbjct: 498 AYNVKAQTFKTAIEAACMLLRIDDVVSGIKKRQAPGAGQAR--SKPKVETEV 547
>ref|XP_001762761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686169|gb|EDQ72560.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 549
Score = 273 bits (699), Expect(3) = e-110
Identities = 133/178 (74%), Positives = 154/178 (86%)
Frame = -1
Query: 1076 ELVKEEDWGVMLTMEEEYIENICAQILTFKSDLVITEKELSDLACHFLSKAGVSAIRRLR 897
E++KEEDW +L MEEEYIE +C QI+ FK DLVITEK LSDLA H+LSKAG+SAIRRLR
Sbjct: 251 EIMKEEDWATLLRMEEEYIEQLCIQIIKFKPDLVITEKGLSDLASHYLSKAGISAIRRLR 310
Query: 896 KTDNNRIAKACGAVFVNRPEELQESDIGTTAGLFEVRKIGDEFFPFIVECKDPKACTVLL 717
KTDNNRIA+ACGA VNRPEEL ESD+GT GLFEV+KIGDE+F FIV+CK+PKACTVLL
Sbjct: 311 KTDNNRIARACGATIVNRPEELHESDVGTRCGLFEVKKIGDEYFSFIVDCKEPKACTVLL 370
Query: 716 RGASKDLLNEVEINLQDAMSVARNIIKYPKLVPGGGASELTVSATLKQKSSAIEGIEK 543
RG SKDLLNEVE NL DAM VARN++K KLVPGGGASE+ VS+ LK+KS +IEG+E+
Sbjct: 371 RGPSKDLLNEVERNLADAMGVARNVLKDAKLVPGGGASEMAVSSILKKKSMSIEGVEQ 428
Score = 140 bits (353), Expect(3) = e-110
Identities = 67/90 (74%), Positives = 75/90 (83%)
Frame = -3
Query: 546 KAAAIAFEAIPRTLAQNCGVNVIRTMTASQGQHANGENPWIGIDGSTGAITDMKENSIWD 367
+A A E IPRTLAQNCGVNVIRTMTA Q +HANGENP +GIDG+TG ITDMKE +WD
Sbjct: 432 RAVVQALEVIPRTLAQNCGVNVIRTMTALQAKHANGENPMVGIDGNTGEITDMKELGVWD 491
Query: 366 AYNVKAQTFKTAKEASCMLLEIDDIVSGIK 277
+Y VK QTFKTA EA+CM+L IDDIVSGIK
Sbjct: 492 SYGVKLQTFKTAIEAACMILRIDDIVSGIK 521
Score = 33.1 bits (74), Expect(3) = e-110
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 271 KKQPPGAGQGPSKPKVEEEGDVDSEQILPE 182
KKQ PG+G P +P DVDSEQ++PE
Sbjct: 522 KKQAPGSG--PKQPVTSTGEDVDSEQMIPE 549
>ref|XP_001771736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677043|gb|EDQ63519.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 555
Score = 274 bits (700), Expect(3) = e-109
Identities = 134/178 (75%), Positives = 153/178 (85%)
Frame = -1
Query: 1076 ELVKEEDWGVMLTMEEEYIENICAQILTFKSDLVITEKELSDLACHFLSKAGVSAIRRLR 897
E++KEEDW +L MEEEYIE +C QI+ FK DLVITEK LSDLA H+LSKAG+SAIRRLR
Sbjct: 257 EIMKEEDWATLLRMEEEYIEQLCVQIIKFKPDLVITEKGLSDLASHYLSKAGISAIRRLR 316
Query: 896 KTDNNRIAKACGAVFVNRPEELQESDIGTTAGLFEVRKIGDEFFPFIVECKDPKACTVLL 717
KTDNNRIA+ACGA VNRPEELQESD+GT GLFEV+KIGDE+F FIV+C +PKACTVLL
Sbjct: 317 KTDNNRIARACGATIVNRPEELQESDVGTRCGLFEVKKIGDEYFTFIVQCNEPKACTVLL 376
Query: 716 RGASKDLLNEVEINLQDAMSVARNIIKYPKLVPGGGASELTVSATLKQKSSAIEGIEK 543
RG SKDLLNEVE NL DAM VARN+IK KLVPGGGASE+ VSA LK+ S +IEG+E+
Sbjct: 377 RGPSKDLLNEVERNLADAMGVARNVIKDAKLVPGGGASEMAVSAILKKNSMSIEGVEQ 434
Score = 137 bits (344), Expect(3) = e-109
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = -3
Query: 546 KAAAIAFEAIPRTLAQNCGVNVIRTMTASQGQHANGENPWIGIDGSTGAITDMKENSIWD 367
+A A A E IPRTLAQNCGVNVIRTMTA Q +HAN ENP GIDG+TG +TDMKE +WD
Sbjct: 438 RAVAQALEVIPRTLAQNCGVNVIRTMTALQAKHANAENPMFGIDGNTGELTDMKELGVWD 497
Query: 366 AYNVKAQTFKTAKEASCMLLEIDDIVSGIK 277
++ VK QTFKTA EA+CMLL IDDIVSGIK
Sbjct: 498 SFGVKLQTFKTAIEAACMLLRIDDIVSGIK 527
Score = 32.3 bits (72), Expect(3) = e-109
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -2
Query: 271 KKQPPGAGQGPSKPKVEEEGDVDSEQILPE 182
KKQ PGA P +P DVDSEQ++PE
Sbjct: 528 KKQAPGAA--PKQPMTSTGEDVDSEQMIPE 555
>ref|XP_002974233.1| hypothetical protein SELMODRAFT_442408 [Selaginella moellendorffii]
gi|300157831|gb|EFJ24455.1| hypothetical protein
SELMODRAFT_442408 [Selaginella moellendorffii]
Length = 556
Score = 271 bits (694), Expect(3) = e-107
Identities = 130/178 (73%), Positives = 157/178 (88%)
Frame = -1
Query: 1076 ELVKEEDWGVMLTMEEEYIENICAQILTFKSDLVITEKELSDLACHFLSKAGVSAIRRLR 897
EL+ EEDW ++L +EEEYI+ +C+QI+ FK D+VITEK LSDLA H+ SKAGVSAIRR+R
Sbjct: 257 ELMNEEDWSMLLKLEEEYIQTMCSQIVKFKPDVVITEKGLSDLASHYFSKAGVSAIRRIR 316
Query: 896 KTDNNRIAKACGAVFVNRPEELQESDIGTTAGLFEVRKIGDEFFPFIVECKDPKACTVLL 717
KTDNNRIA+ACGA VNRPEELQESD+GT AGLFEV+KIGDEFF FI +CKDPKACT+LL
Sbjct: 317 KTDNNRIARACGATIVNRPEELQESDVGTGAGLFEVQKIGDEFFTFITDCKDPKACTILL 376
Query: 716 RGASKDLLNEVEINLQDAMSVARNIIKYPKLVPGGGASELTVSATLKQKSSAIEGIEK 543
RGASKD+LNEVE NL DAM VARN+I+ KL+PGGGA+E+ VSA LK+K+S+IEG+E+
Sbjct: 377 RGASKDVLNEVERNLHDAMGVARNVIRDAKLLPGGGATEMVVSAALKKKASSIEGVEQ 434
Score = 134 bits (338), Expect(3) = e-107
Identities = 67/90 (74%), Positives = 75/90 (83%)
Frame = -3
Query: 546 KAAAIAFEAIPRTLAQNCGVNVIRTMTASQGQHANGENPWIGIDGSTGAITDMKENSIWD 367
KAAA AFE IPRTLAQNCGVNVIRTMTA Q +HA+ +N GI+G TG ITDMKE +WD
Sbjct: 438 KAAAQAFEVIPRTLAQNCGVNVIRTMTALQAKHADEDNANFGIEGHTGKITDMKEAGVWD 497
Query: 366 AYNVKAQTFKTAKEASCMLLEIDDIVSGIK 277
++ VKAQTFKTA EA+CMLL IDDIVSGIK
Sbjct: 498 SFGVKAQTFKTAIEAACMLLRIDDIVSGIK 527
Score = 30.4 bits (67), Expect(3) = e-107
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 274 LKKQPPGAGQGPSKPKVEEEGDVDSEQILPE 182
+KK+ G K ++E++ DVDSEQ +PE
Sbjct: 526 IKKKQTGPKAKTPKTQIEDDKDVDSEQAIPE 556